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Summary Information (see also Sequences/Alignments below) |
Asymmetric/Biological Unit (1, 1)
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Asymmetric Unit (1, 1)
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Asymmetric/Biological Unit
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(no "Cis Peptide Bond" information available for 2RFK) |
(no "SAP(SNP)/Variant" information available for 2RFK) |
Asymmetric/Biological Unit (1, 1)
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(no "Exon" information available for 2RFK) |
Asymmetric/Biological UnitChain A from PDB Type:PROTEIN Length:334 aligned with TRUB_PYRFU | Q7LWY0 from UniProtKB/Swiss-Prot Length:340 Alignment length:334 14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 TRUB_PYRFU 5 EVRRILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKLWEKRD 338 SCOP domains d2rfka2 A:8-252 automated matches d2rfka1 A:253-341 automated matches SCOP domains CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains (1) -DKCLD-2rfkA02 A:9-66 -----------------------------------------------------TruB_N-2rfkA03 A:120-183 ----------------------------------------------------------------------PUA-2rfkA01 A:254-327 -------------- Pfam domains (1) Pfam domains (2) ----------------------------------------------------------------------------------------------------------------TruB_N-2rfkA04 A:120-183 -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2) SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PUA PDB: A:253-328 UniProt: 250-325 ------------- PROSITE Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2rfk A 8 EVRRILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLAPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKLWEKRD 341 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 Chain B from PDB Type:PROTEIN Length:53 aligned with NOP10_PYRFU | Q8U1R4 from UniProtKB/Swiss-Prot Length:60 Alignment length:53 12 22 32 42 52 NOP10_PYRFU 3 FRIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 55 SCOP domains d2rfkb_ B: Ribosome biogenesis protein Nop10 SCOP domains CATH domains 2rfkB00 B:3-55 Nop10-like SnoRNP CATH domains Pfam domains Nop10p-2rfkB01 B:3-53 -- Pfam domains SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs) PROSITE ----------------------------------------------------- PROSITE Transcript ----------------------------------------------------- Transcript 2rfk B 3 FRIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 55 12 22 32 42 52 Chain C from PDB Type:PROTEIN Length:74 aligned with Q8U029_PYRFU | Q8U029 from UniProtKB/TrEMBL Length:104 Alignment length:74 17 27 37 47 57 67 77 Q8U029_PYRFU 8 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDE 81 SCOP domains d2rfkc_ C: Gar1 homolog PF1791 SCOP domains CATH domains 2rfkC00 C:1-74 Probable tRNA pseudouridine synthase domain CATH domains Pfam domains Gar1-2rfkC01 C:1-74 Pfam domains SAPs(SNPs) -------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------- PROSITE Transcript -------------------------------------------------------------------------- Transcript 2rfk C 1 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDE 74 10 20 30 40 50 60 70 Chain D from PDB Type:RNA Length:21 2rfk D 1 GGGCUCCGGAAACCGCGGCGC 21 10 20 Chain E from PDB Type:RNA Length:26 2rfk E 1 GCGCUUCGCUCCCGGAGCCCACACUA 26 10 20 Chain F from PDB Type:RNA Length:14 2rfk F 4 GGAGCGUGCGGUUU 17 13
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Asymmetric/Biological Unit
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Asymmetric/Biological Unit |
Asymmetric/Biological Unit |
Asymmetric/Biological Unit(hide GO term definitions) Chain A (TRUB_PYRFU | Q7LWY0)
Chain B (NOP10_PYRFU | Q8U1R4)
Chain C (Q8U029_PYRFU | Q8U029)
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