Chain A from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfka1 A:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfka2 A:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkA01 A:1-108 Immunoglobulins 3cfkA02 A:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeeee..eeee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk A 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain B from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfkb1 B:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkb2 B:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkB01 B:1-113 Immunoglobulins 3cfkB02 B:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee........eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk B 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain B from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfkb1 B:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkb2 B:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkB01 B:1-113 Immunoglobulins 3cfkB02 B:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee.....-...eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk B 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain C from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfkc1 C:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfkc2 C:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkC01 C:1-108 Immunoglobulins 3cfkC02 C:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeee....eee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk C 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain D from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfkd1 D:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkd2 D:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkD01 D:1-113 Immunoglobulins 3cfkD02 D:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee.hhhhh.eeeeeehhh.eeeeee...hhhhheeeeeeeeeee....eeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk D 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain D from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfkd1 D:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkd2 D:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkD01 D:1-113 Immunoglobulins 3cfkD02 D:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.hhhhh.eeeeeehhh.eeeeee...hhhhheeeeeeeeeee...-.eeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk D 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain E from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfke1 E:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfke2 E:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkE01 E:1-108 Immunoglobulins 3cfkE02 E:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeeee..eeee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk E 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain F from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfkf1 F:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkf2 F:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkF01 F:1-113 Immunoglobulins 3cfkF02 F:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee........eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk F 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain F from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfkf1 F:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkf2 F:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkF01 F:1-113 Immunoglobulins 3cfkF02 F:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee.....-...eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk F 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain G from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfkg1 G:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfkg2 G:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkG01 G:1-108 Immunoglobulins 3cfkG02 G:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeeee..eeee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk G 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain H from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfkh1 H:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkh2 H:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkH01 H:1-113 Immunoglobulins 3cfkH02 H:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeeeeee....eeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk H 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain H from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfkh1 H:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkh2 H:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkH01 H:1-113 Immunoglobulins 3cfkH02 H:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeeeeee...-.eeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk H 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain I from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfki1 I:1-113 Immunoglobulin heavy chain variable domain, VH d3cfki2 I:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkI01 I:1-113 Immunoglobulins 3cfkI02 I:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee........eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk I 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain I from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfki1 I:1-113 Immunoglobulin heavy chain variable domain, VH d3cfki2 I:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkI01 I:1-113 Immunoglobulins 3cfkI02 I:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee.....-...eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk I 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain J from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfkj1 J:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfkj2 J:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkJ01 J:1-108 Immunoglobulins 3cfkJ02 J:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeeee..eeee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk J 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain K from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfkk1 K:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkk2 K:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkK01 K:1-113 Immunoglobulins 3cfkK02 K:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeeeeeehhhheeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk K 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain K from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfkk1 K:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkk2 K:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkK01 K:1-113 Immunoglobulins 3cfkK02 K:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeeeeeehhh-heeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee........eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk K 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain L from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfkl1 L:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfkl2 L:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkL01 L:1-108 Immunoglobulins 3cfkL02 L:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeeee..eeee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk L 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain M from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfkm1 M:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfkm2 M:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkM01 M:1-108 Immunoglobulins 3cfkM02 M:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeeee..eeee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee....eeeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeeee......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk M 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain N from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfkn1 N:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkn2 N:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkN01 N:1-113 Immunoglobulins 3cfkN02 N:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee........eeeeehhh.eeeeee...hhhhheeeeeeeee........eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk N 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain N from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfkn1 N:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkn2 N:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkN01 N:1-113 Immunoglobulins 3cfkN02 N:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee........eeeeehhh.eeeeee...hhhhheeeeeeeee.....-...eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk N 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain O from PDB Type:PROTEIN Length:215
aligned with IGKC_HUMAN | P01834 from UniProtKB/Swiss-Prot Length:107
Alignment length:215
1
- - - - - - - - - - 1 11 21 31 41 51 61 71 81 91 101
IGKC_HUMAN - -------------------------------------------------------------------------------------------------------------RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 106
SCOP domains d3cfko1 O:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d3cfko2 O:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 3cfkO01 O:1-108 Immunoglobulins 3cfkO02 O:109-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeeee..eeee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------L---------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC --------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk O 1 ELVVTQESALTTSPGETVTLTCRSSSGAVTTSNYATWVQEKPDHLFTGLIGGTNKRAPGVPARFSGSLIGDRAALTITGAQTEDEAIYFCALWNSNHLVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE 213
11 21 ||28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
9| 27A||
11 27B|
27C
Chain P from PDB Type:PROTEIN Length:224
aligned with A8K008_HUMAN | A8K008 from UniProtKB/TrEMBL Length:472
Alignment length:226
126
125 |
29 39 49 59 69 79 89 99 109 119 | 127 137 147 157 167 177 187 197 207 217 227 237
A8K008_HUMAN 20 EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTNPPDYY--YYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 243
SCOP domains d3cfkp1 P:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkp2 P:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkP01 P:1-113 Immunoglobulins 3cfkP02 P:114-228 Immunoglobulins CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee.--.....eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee........eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk P 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEIN--PDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYNHYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | | 57 67 77 |||84 94 100D|| 108 118 128 || 140 150 ||||165 || 176 || 187 197 ||| 210 220 ||
52 | 82A|| 100A||||| 130| 154||| 169| 180| 200|| 223|
52A 82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Chain P from PDB Type:PROTEIN Length:224
aligned with Q6N089_HUMAN | Q6N089 from UniProtKB/TrEMBL Length:472
Alignment length:225
118
117 |
29 39 49 59 69 79 89 99 109 118 128 138 148 158 168 178 188 198 208 218 228 238
Q6N089_HUMAN 20 EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIAYADSVKGRFTISRDNGKNSLYLQMNSLRAEDTALYYCAK-EIGAHNFYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK 243
SCOP domains d3cfkp1 P:1-113 Immunoglobulin heavy chain variable domain, VH d3cfkp2 P:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3cfkP01 P:1-113 Immunoglobulins 3cfkP02 P:114-228 Immunoglobulins CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeee.....-...eeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3cfk P 1 EVKLLESGGGLAQPGGSLKLSCAASGFDFRRYWMTWVRQAPGKGLEWIGEINPDSRTINYMPSLKDKFIISRDNAKNSLYLQLSRLRSEDSALYYCVRLDFDVYN-HYYVLDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 228
10 20 30 40 50 | 59 69 79 ||| 86 96 | 100E| 109 119 129|| 141 151 |||| 166 || 177 || 188 198 ||| 211 221 ||
52A 82A|| 100A ||||| 130| 154||| 169| 180| 200|| 223|
82B| 100B|||| 133 156|| 171 182 203| 226
82C 100C||| 157| 205
100D|| 162
100E|
100F
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |