![]() |
|
|
|
|
|
|
Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (6, 24)
|
Asymmetric Unit (16, 16)
|
Asymmetric Unit
|
Asymmetric Unit
|
(no "SAP(SNP)/Variant" information available for 2I5Y) |
(no "PROSITE Motif" information available for 2I5Y) |
(no "Exon" information available for 2I5Y) |
Asymmetric UnitChain G from PDB Type:PROTEIN Length:302 aligned with ENV_HV1Y2 | P35961 from UniProtKB/Swiss-Prot Length:843 Alignment length:399 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 ENV_HV1Y2 81 QEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDLRNATNTTSSSWETMEKGEIKNCSFNITTSIRDKVQKEYALFYNLDVVPIDNASYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNNTRKSINIGPGRALYTTGEIIGDIRQAHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 479 SCOP domains d2i5yg_ G: gp120 core SCOP domains CATH domains 2i5yG00 G:82-492 HIV Envelope Protein Gp120; Cha in G CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2i5y G 82 SEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGA-------------------------------------------------------------GSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGA----------------------------GHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWND--------RNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 492 91 101 111 121 | - - - - - - 194 204 214 224 234 244 254 264 274 284 294 | - - - | 335 345 355 365 375 385 395 413 423 433 443 453 463 473 483 129 194 299 329 395 412 Chain H from PDB Type:PROTEIN Length:224 aligned with Q5EBM2_HUMAN | Q5EBM2 from UniProtKB/TrEMBL Length:519 Alignment length:230 130 131 29 39 49 59 69 79 89 99 109 119 129| 133 143 153 163 173 183 193 203 213 223 233 243 Q5EBM2_HUMAN 20 QVQLVQSGAEVKKPGASVKVSCEVSGHTLTELSRHWVRQAPGKGLEWMGGFDPEDGETVYAQTFQGRVTMTEDTSTDTAYMDLSNLRSDDTAVYYCATGVYDVLTGYSRFD------YWGQGTQVTVSSASTKGPSVFPLAPCSRSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVELK 243 SCOP domains d2i5yh1 H:1-113 Immunoglobulin heavy chain variable domain, VH d2i5yh2 H:114- 214 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains CATH domains 2i5yH01 H:1-113 Immunoglobulins 2i5yH02 H:114- 213 Immunoglobulins - CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2i5y H 1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCA-GVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPS-----GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 214 10 20 30 40 50 | 59 69 79 ||| 86 | 95 |100E|||||| 104 114 124 | 134 144 154 164 174 184 194 204 214 52A 82A|| 93 | 100A|||||100J| 127 133 82B| 94 100B|||||100K 82C 100C|||||| 100D||||| 100E|||| 100F||| 100G|| 100H| 100I Chain L from PDB Type:PROTEIN Length:214 SCOP domains d2i5yl1 L:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d2i5yl2 L:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains CATH domains 2i5yL01 L:1-108 Immunoglobulins 2i5yL02 L:109-211 Immunoglobulins - CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2i5y L 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG 212 10 20 30 40 50 60 70 80 90 || 98 108 118 128 138 148 158 168 178 188 198 208 95A| 95B Chain M from PDB Type:PROTEIN Length:27 SCOP domains -d2i5ym1 M:2-27 SCOP domains CATH domains --------------------------- CATH domains Pfam domains --------------------------- Pfam domains SAPs(SNPs) --------------------------- SAPs(SNPs) PROSITE --------------------------- PROSITE Transcript --------------------------- Transcript 2i5y M 1 xNLHFCQLRCKSLGLLGRCAxTfCACx 27 | 10 20| | | 1-MPT 21-DPR | 23-BIF 27-VLM Chain P from PDB Type:PROTEIN Length:300 aligned with ENV_HV1Y2 | P35961 from UniProtKB/Swiss-Prot Length:843 Alignment length:399 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 ENV_HV1Y2 81 QEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDLRNATNTTSSSWETMEKGEIKNCSFNITTSIRDKVQKEYALFYNLDVVPIDNASYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNNTRKSINIGPGRALYTTGEIIGDIRQAHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 479 SCOP domains d2i5yp_ P: gp120 core SCOP domains CATH domains 2i5yP00 P:82-492 HIV Envelope Protein Gp120; Cha in G CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2i5y P 82 SEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGA-------------------------------------------------------------GSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGA----------------------------GHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTW----------RNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 492 91 101 111 121 | - - - - - - 194 204 214 224 234 244 254 264 274 284 294 | - - - | 335 345 355 365 375 385 | - 413 423 433 443 453 463 473 483 129 194 299 329 393 412 Chain Q from PDB Type:PROTEIN Length:214 SCOP domains d2i5yq1 Q:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d2i5yq2 Q:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains CATH domains 2i5yQ01 Q:1-108 Immunoglobulins 2i5yQ02 Q:109-211 Immunoglobulins - CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2i5y Q 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG 212 10 20 30 40 50 60 70 80 90 || 98 108 118 128 138 148 158 168 178 188 198 208 95A| 95B Chain R from PDB Type:PROTEIN Length:223 aligned with Q5EBM2_HUMAN | Q5EBM2 from UniProtKB/TrEMBL Length:519 Alignment length:230 130 131 29 39 49 59 69 79 89 99 109 119 129| 133 143 153 163 173 183 193 203 213 223 233 243 Q5EBM2_HUMAN 20 QVQLVQSGAEVKKPGASVKVSCEVSGHTLTELSRHWVRQAPGKGLEWMGGFDPEDGETVYAQTFQGRVTMTEDTSTDTAYMDLSNLRSDDTAVYYCATGVYDVLTGYSRFD------YWGQGTQVTVSSASTKGPSVFPLAPCSRSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVELK 243 SCOP domains d2i5yr1 R:1-113 Immunoglobulin heavy chain variable domain, VH d2i5yr2 R:114- 214 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains CATH domains 2i5yR01 R:1-113 Immunoglobulins 2i5yR02 R:114- 213 Immunoglobulins - CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2i5y R 1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCA-GVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPS------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 214 10 20 30 40 50 | 59 69 79 ||| 86 | 95 |100E|||||| 104 114 124 | 134 144 154 164 174 184 194 204 214 52A 82A|| 93 | 100A|||||100J| 127 134 82B| 94 100B|||||100K 82C 100C|||||| 100D||||| 100E|||| 100F||| 100G|| 100H| 100I Chain S from PDB Type:PROTEIN Length:27 SCOP domains -d2i5ys1 S:2-27 SCOP domains CATH domains --------------------------- CATH domains Pfam domains --------------------------- Pfam domains SAPs(SNPs) --------------------------- SAPs(SNPs) PROSITE --------------------------- PROSITE Transcript --------------------------- Transcript 2i5y S 1 xNLHFCQLRCKSLGLLGRCAxTfCACx 27 | 10 20| | | 1-MPT 21-DPR | 23-BIF 27-VLM
|
Asymmetric Unit
|
Asymmetric Unit
|
(no "Pfam Domain" information available for 2I5Y) |
Asymmetric Unit(hide GO term definitions) Chain G,P (ENV_HV1Y2 | P35961)
|
|
|
|
|
|
|