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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (17, 62)
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Asymmetric Unit (56, 56)
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Asymmetric Unit
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Asymmetric Unit
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(no "SAP(SNP)/Variant" information available for 2ZXW) |
Asymmetric Unit (9, 18)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:514 aligned with COX1_BOVIN | P00396 from UniProtKB/Swiss-Prot Length:514 Alignment length:514 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 COX1_BOVIN 1 MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514 SCOP domains d2zxwa_ A: automated matches SCOP domains CATH domains -2zxwA00 A:2-514 Cytochrome C Oxidase, chain A CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (1) COX1 PDB: A:1-514 UniProt: 1-514 PROSITE (1) PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COX1_CUB PDB: A:236-291 UniProt: 236-291 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2) Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2zxw A 1 mFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514 | 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 | 1-FME Chain B from PDB Type:PROTEIN Length:227 aligned with COX2_BOVIN | P68530 from UniProtKB/Swiss-Prot Length:227 Alignment length:227 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 COX2_BOVIN 1 MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227 SCOP domains d2zxwb1 B:1-90 Mitochondrial cytochrome c oxidase, subunit II d2zxwb2 B:91-227 Cytochrome c oxidase SCOP domains CATH domains -2zxwB01 B:2-91 [code=1.10.287.90, no name defined] 2zxwB02 B:92-227 Cupredoxins - blue copper proteins CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) COX2_TM PDB: B:1-91 UniProt: 1-91 COX2_CUA PDB: B:92-225 UniProt: 92-225 -- PROSITE (2) PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------COX2 PDB: B:159-207 UniProt: 159-207 -------------------- PROSITE (3) Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2zxw B 1 mAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227 | 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 1-FME Chain C from PDB Type:PROTEIN Length:259 aligned with COX3_BOVIN | P00415 from UniProtKB/Swiss-Prot Length:261 Alignment length:259 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 COX3_BOVIN 3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261 SCOP domains d2zxwc_ C: Mitochondrial cytochrome c oxidase, subunit III SCOP domains CATH domains 2zxwC01 C:3-70 [code=1.10.287.70, no name defined] 2zxwC02 C:71-261 [code=1.20.120.80, no name defined] CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2) PROSITE (3) -COX3 PDB: C:4-261 UniProt: 4-261 PROSITE (3) Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2zxw C 3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 Chain D from PDB Type:PROTEIN Length:144 aligned with COX41_BOVIN | P00423 from UniProtKB/Swiss-Prot Length:169 Alignment length:144 35 45 55 65 75 85 95 105 115 125 135 145 155 165 COX41_BOVIN 26 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 169 SCOP domains d2zxwd_ D: automated matches SCOP domains CATH domains 2zxwD00 D:4-147 Cytochrome C Oxidase, chain D CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 2zxw D 4 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 147 13 23 33 43 53 63 73 83 93 103 113 123 133 143 Chain E from PDB Type:PROTEIN Length:104 aligned with COX5A_BOVIN | P00426 from UniProtKB/Swiss-Prot Length:152 Alignment length:104 58 68 78 88 98 108 118 128 138 148 COX5A_BOVIN 49 ETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 152 SCOP domains d2zxwe_ E: Cytochrome c oxidase subunit E SCOP domains CATH domains 2zxwE00 E:6-109 [code=1.25.40.40, no name defined] CATH domains Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------- PROSITE Transcript 3 (1) Exon 3.2 PDB: E:6-32 ----------------------------------------Exon 3.4 PDB: E:73-109 Transcript 3 (1) Transcript 3 (2) --------------------------Exon 3.3 PDB: E:32-72 UniProt: 75-115 ------------------------------------- Transcript 3 (2) 2zxw E 6 ETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 109 15 25 35 45 55 65 75 85 95 105 Chain F from PDB Type:PROTEIN Length:93 aligned with COX5B_BOVIN | P00428 from UniProtKB/Swiss-Prot Length:129 Alignment length:93 44 54 64 74 84 94 104 114 124 COX5B_BOVIN 35 GGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQL 127 SCOP domains d2zxwf_ F: Cytochrome c oxidase Subunit F SCOP domains CATH domains 2zxwF00 F:4-96 Cytochrome C Oxidase, chain F CATH domains Pfam domains --------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) --------------------------------------------------------------------------------------------- PROSITE (2) PROSITE (3) -----------------------------------------------------------------COX5B_1 PDB: F:69-91 ----- PROSITE (3) Transcript --------------------------------------------------------------------------------------------- Transcript 2zxw F 4 GGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQL 96 13 23 33 43 53 63 73 83 93 Chain G from PDB Type:PROTEIN Length:84 aligned with CX6A2_BOVIN | P07471 from UniProtKB/Swiss-Prot Length:97 Alignment length:84 22 32 42 52 62 72 82 92 CX6A2_BOVIN 13 ASAAKGDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK 96 SCOP domains d2zxwg_ G: Mitochondrial cytochrome c oxidase subunit VIa SCOP domains CATH domains 2zxwG00 G:1-84 Cytochrome C Oxidase, chain G CATH domains Pfam domains ------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE (2) ------------------------------------------------------------------------------------ PROSITE (2) PROSITE (3) ------------------------------------------------------------------------------------ PROSITE (3) PROSITE (4) ------------------------------------------------------------------------------------ PROSITE (4) PROSITE (5) ------------------------------------------------------COX6A PDB: G:55-7------------ PROSITE (5) Transcript 4 (1) Exon 4.1 ---------------------------------------------Exon 4.3 PDB: G:59-84 Transcript 4 (1) Transcript 4 (2) ------------Exon 4.2 PDB: G:13-58 UniProt: 25-70 -------------------------- Transcript 4 (2) 2zxw G 1 ASAAKGDHGGtGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK 84 10| 20 30 40 50 60 70 80 11-TPO Chain H from PDB Type:PROTEIN Length:75 aligned with CX6B1_BOVIN | P00429 from UniProtKB/Swiss-Prot Length:86 Alignment length:75 21 31 41 51 61 71 81 CX6B1_BOVIN 12 YQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86 SCOP domains d2zxwh_ H: automated matches SCOP domains CATH domains 2zxwH00 H:11-85 Cytochrome C oxidase subunit h CATH domains Pfam domains --------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) --------------------------------------------------------------------------- PROSITE (2) PROSITE (3) --------------------------------------------------------------------------- PROSITE (3) PROSITE (4) ---------------CHCH PDB: H:26-72 UniProt: 27-73 ------------- PROSITE (4) Transcript --------------------------------------------------------------------------- Transcript 2zxw H 11 YQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 85 20 30 40 50 60 70 80 Chain I from PDB Type:PROTEIN Length:71 aligned with COX6C_BOVIN | P04038 from UniProtKB/Swiss-Prot Length:74 Alignment length:71 13 23 33 43 53 63 73 COX6C_BOVIN 4 ALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK 74 SCOP domains d2zxwi_ I: Mitochondrial cytochrome c oxidase subunit VIc SCOP domains CATH domains 2zxwI00 I:3-73 Cytochrome C Oxidase, chain I CATH domains Pfam domains ----------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs) PROSITE ----------------------------------------------------------------------- PROSITE Transcript 1 Exon 1.2 PDB: I:3-36 [INCOMPLETE]Exon 1.3 PDB: I:37-73 UniProt: 38-74 Transcript 1 2zxw I 3 ALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK 73 12 22 32 42 52 62 72 Chain J from PDB Type:PROTEIN Length:57 aligned with CX7A1_BOVIN | P07470 from UniProtKB/Swiss-Prot Length:80 Alignment length:57 31 41 51 61 71 CX7A1_BOVIN 22 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPH 78 SCOP domains d2zxwj_ J: SCOP domains CATH domains 2zxwJ00 J:1-57 Cytochrome C Oxidase, chain J CATH domains Pfam domains --------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------- PROSITE Transcript 2 (1) Exon 2.2 Exon 2.3 PDB: J:14-42 --------------- Transcript 2 (1) Transcript 2 (2) -----------------------------------------Exon 2.4 Transcript 2 (2) 2zxw J 1 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPH 57 10 20 30 40 50 Chain K from PDB Type:PROTEIN Length:49 aligned with COX7B_BOVIN | P13183 from UniProtKB/Swiss-Prot Length:80 Alignment length:49 39 49 59 69 COX7B_BOVIN 30 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR 78 SCOP domains d2zxwk_ K: automated matches SCOP domains CATH domains 2zxwK00 K:6-54 Cytochrome C Oxidase, chain K CATH domains Pfam domains ------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------- PROSITE Transcript ------------------------------------------------- Transcript 2zxw K 6 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR 54 15 25 35 45 Chain L from PDB Type:PROTEIN Length:46 aligned with COX7C_BOVIN | P00430 from UniProtKB/Swiss-Prot Length:63 Alignment length:46 27 37 47 57 COX7C_BOVIN 18 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK 63 SCOP domains d2zxwl_ L: SCOP domains CATH domains 2zxwL00 L:2-47 Cytochrome C Oxidase, chain L CATH domains Pfam domains ---------------------------------------------- Pfam domains SAPs(SNPs) ---------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------- PROSITE Transcript ---------------------------------------------- Transcript 2zxw L 2 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK 47 11 21 31 41 Chain M from PDB Type:PROTEIN Length:43 aligned with COX8B_BOVIN | P10175 from UniProtKB/Swiss-Prot Length:70 Alignment length:43 34 44 54 64 COX8B_BOVIN 25 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS 67 SCOP domains d2zxwm_ M: automated matches SCOP domains CATH domains 2zxwM00 M:1-43 CATH domains Pfam domains ------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------- PROSITE Transcript ------------------------------------------- Transcript 2zxw M 1 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS 43 10 20 30 40 Chain N from PDB Type:PROTEIN Length:514 aligned with COX1_BOVIN | P00396 from UniProtKB/Swiss-Prot Length:514 Alignment length:514 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 COX1_BOVIN 1 MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514 SCOP domains d2zxwn_ N: automated matches SCOP domains CATH domains -2zxwN00 N:2-514 Cytochrome C Oxidase, chain A CATH domains Pfam domains (1) -----------COX1-2zxwN01 N:12-461 ----------------------------------------------------- Pfam domains (1) Pfam domains (2) -----------COX1-2zxwN02 N:12-461 ----------------------------------------------------- Pfam domains (2) SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (1) COX1 PDB: N:1-514 UniProt: 1-514 PROSITE (1) PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COX1_CUB PDB: N:236-291 UniProt: 236-291 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2) Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2zxw N 1 mFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514 | 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 1-FME Chain O from PDB Type:PROTEIN Length:227 aligned with COX2_BOVIN | P68530 from UniProtKB/Swiss-Prot Length:227 Alignment length:227 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 COX2_BOVIN 1 MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227 SCOP domains d2zxwo1 O:1-90 Mitochondrial cytochrome c oxidase, subunit II d2zxwo2 O:91-227 Cytochrome c oxidase SCOP domains CATH domains -2zxwO01 O:2-91 [code=1.10.287.90, no name defined] 2zxwO02 O:92-227 Cupredoxins - blue copper proteins CATH domains Pfam domains (1) COX2_TM-2zxwO03 O:1-83 -----------COX2-2zxwO01 O:95-214 ------------- Pfam domains (1) Pfam domains (2) COX2_TM-2zxwO04 O:1-83 -----------COX2-2zxwO02 O:95-214 ------------- Pfam domains (2) SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) COX2_TM PDB: O:1-91 UniProt: 1-91 COX2_CUA PDB: O:92-225 UniProt: 92-225 -- PROSITE (2) PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------COX2 PDB: O:159-207 UniProt: 159-207 -------------------- PROSITE (3) Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2zxw O 1 mAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227 | 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 1-FME Chain P from PDB Type:PROTEIN Length:259 aligned with COX3_BOVIN | P00415 from UniProtKB/Swiss-Prot Length:261 Alignment length:259 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 COX3_BOVIN 3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261 SCOP domains d2zxwp_ P: Mitochondrial cytochrome c oxidase, subunit III SCOP domains CATH domains 2zxwP01 P:3-70 [code=1.10.287.70, no name defined] 2zxwP02 P:71-261 [code=1.20.120.80, no name defined] CATH domains Pfam domains (1) ---COX3-2zxwP01 P:6-261 Pfam domains (1) Pfam domains (2) ---COX3-2zxwP02 P:6-261 Pfam domains (2) SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2) PROSITE (3) -COX3 PDB: P:4-261 UniProt: 4-261 PROSITE (3) Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 2zxw P 3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 Chain Q from PDB Type:PROTEIN Length:144 aligned with COX41_BOVIN | P00423 from UniProtKB/Swiss-Prot Length:169 Alignment length:144 35 45 55 65 75 85 95 105 115 125 135 145 155 165 COX41_BOVIN 26 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 169 SCOP domains d2zxwq_ Q: automated matches SCOP domains CATH domains 2zxwQ00 Q:4-147 Cytochrome C Oxidase, chain D CATH domains Pfam domains (1) COX4-2zxwQ01 Q:4-146 - Pfam domains (1) Pfam domains (2) COX4-2zxwQ02 Q:4-146 - Pfam domains (2) SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 2zxw Q 4 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 147 13 23 33 43 53 63 73 83 93 103 113 123 133 143 Chain R from PDB Type:PROTEIN Length:104 aligned with COX5A_BOVIN | P00426 from UniProtKB/Swiss-Prot Length:152 Alignment length:104 58 68 78 88 98 108 118 128 138 148 COX5A_BOVIN 49 ETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 152 SCOP domains d2zxwr_ R: Cytochrome c oxidase subunit E SCOP domains CATH domains 2zxwR00 R:6-109 [code=1.25.40.40, no name defined] CATH domains Pfam domains (1) COX5A-2zxwR01 R:6-108 - Pfam domains (1) Pfam domains (2) COX5A-2zxwR02 R:6-108 - Pfam domains (2) SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------- PROSITE Transcript 3 (1) Exon 3.2 PDB: R:6-32 ----------------------------------------Exon 3.4 PDB: R:73-109 Transcript 3 (1) Transcript 3 (2) --------------------------Exon 3.3 PDB: R:32-72 UniProt: 75-115 ------------------------------------- Transcript 3 (2) 2zxw R 6 ETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 109 15 25 35 45 55 65 75 85 95 105 Chain S from PDB Type:PROTEIN Length:93 aligned with COX5B_BOVIN | P00428 from UniProtKB/Swiss-Prot Length:129 Alignment length:93 44 54 64 74 84 94 104 114 124 COX5B_BOVIN 35 GGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQL 127 SCOP domains d2zxws_ S: Cytochrome c oxidase Subunit F SCOP domains CATH domains 2zxwS00 S:4-96 Cytochrome C Oxidase, chain F CATH domains Pfam domains (1) COX5B-2zxwS01 S:4-96 Pfam domains (1) Pfam domains (2) COX5B-2zxwS02 S:4-96 Pfam domains (2) SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) --------------------------------------------------------------------------------------------- PROSITE (2) PROSITE (3) -----------------------------------------------------------------COX5B_1 PDB: S:69-91 ----- PROSITE (3) Transcript --------------------------------------------------------------------------------------------- Transcript 2zxw S 4 GGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQL 96 13 23 33 43 53 63 73 83 93 Chain T from PDB Type:PROTEIN Length:84 aligned with CX6A2_BOVIN | P07471 from UniProtKB/Swiss-Prot Length:97 Alignment length:84 22 32 42 52 62 72 82 92 CX6A2_BOVIN 13 ASAAKGDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK 96 SCOP domains d2zxwt_ T: Mitochondrial cytochrome c oxidase subunit VIa SCOP domains CATH domains 2zxwT00 T:1-84 Cytochrome C Oxidase, chain G CATH domains Pfam domains (1) COX6A-2zxwT01 T:1-79 ----- Pfam domains (1) Pfam domains (2) COX6A-2zxwT02 T:1-79 ----- Pfam domains (2) SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE (2) ------------------------------------------------------------------------------------ PROSITE (2) PROSITE (3) ------------------------------------------------------------------------------------ PROSITE (3) PROSITE (4) ------------------------------------------------------------------------------------ PROSITE (4) PROSITE (5) ------------------------------------------------------COX6A PDB: T:55-7------------ PROSITE (5) Transcript 4 (1) Exon 4.1 ---------------------------------------------Exon 4.3 PDB: T:59-84 Transcript 4 (1) Transcript 4 (2) ------------Exon 4.2 PDB: T:13-58 UniProt: 25-70 -------------------------- Transcript 4 (2) 2zxw T 1 ASAAKGDHGGtGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK 84 10| 20 30 40 50 60 70 80 11-TPO Chain U from PDB Type:PROTEIN Length:75 aligned with CX6B1_BOVIN | P00429 from UniProtKB/Swiss-Prot Length:86 Alignment length:75 21 31 41 51 61 71 81 CX6B1_BOVIN 12 YQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86 SCOP domains d2zxwu_ U: automated matches SCOP domains CATH domains 2zxwU00 U:11-85 Cytochrome C oxidase subunit h CATH domains Pfam domains (1) -------COX6B-2zxwU01 U:18-82 --- Pfam domains (1) Pfam domains (2) -------COX6B-2zxwU02 U:18-82 --- Pfam domains (2) SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) --------------------------------------------------------------------------- PROSITE (2) PROSITE (3) --------------------------------------------------------------------------- PROSITE (3) PROSITE (4) ---------------CHCH PDB: U:26-72 UniProt: 27-73 ------------- PROSITE (4) Transcript --------------------------------------------------------------------------- Transcript 2zxw U 11 YQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 85 20 30 40 50 60 70 80 Chain V from PDB Type:PROTEIN Length:71 aligned with COX6C_BOVIN | P04038 from UniProtKB/Swiss-Prot Length:74 Alignment length:71 13 23 33 43 53 63 73 COX6C_BOVIN 4 ALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK 74 SCOP domains d2zxwv_ V: Mitochondrial cytochrome c oxidase subunit VIc SCOP domains CATH domains 2zxwV00 V:3-73 Cytochrome C Oxidase, chain I CATH domains Pfam domains (1) COX6C-2zxwV01 V:3-73 Pfam domains (1) Pfam domains (2) COX6C-2zxwV02 V:3-73 Pfam domains (2) SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs) PROSITE ----------------------------------------------------------------------- PROSITE Transcript 1 Exon 1.2 PDB: V:3-36 [INCOMPLETE]Exon 1.3 PDB: V:37-73 UniProt: 38-74 Transcript 1 2zxw V 3 ALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK 73 12 22 32 42 52 62 72 Chain W from PDB Type:PROTEIN Length:57 aligned with CX7A1_BOVIN | P07470 from UniProtKB/Swiss-Prot Length:80 Alignment length:57 31 41 51 61 71 CX7A1_BOVIN 22 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPH 78 SCOP domains d2zxww_ W: SCOP domains CATH domains 2zxwW00 W:1-57 Cytochrome C Oxidase, chain J CATH domains Pfam domains (1) -COX7a-2zxwW01 W:2-57 Pfam domains (1) Pfam domains (2) -COX7a-2zxwW02 W:2-57 Pfam domains (2) SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------- PROSITE Transcript 2 (1) Exon 2.2 Exon 2.3 PDB: W:14-42 --------------- Transcript 2 (1) Transcript 2 (2) -----------------------------------------Exon 2.4 Transcript 2 (2) 2zxw W 1 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPH 57 10 20 30 40 50 Chain X from PDB Type:PROTEIN Length:49 aligned with COX7B_BOVIN | P13183 from UniProtKB/Swiss-Prot Length:80 Alignment length:49 39 49 59 69 COX7B_BOVIN 30 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR 78 SCOP domains d2zxwx_ X: automated matches SCOP domains CATH domains 2zxwX00 X:6-54 Cytochrome C Oxidase, chain K CATH domains Pfam domains (1) COX7B-2zxwX01 X:6-54 Pfam domains (1) Pfam domains (2) COX7B-2zxwX02 X:6-54 Pfam domains (2) SAPs(SNPs) ------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------- PROSITE Transcript ------------------------------------------------- Transcript 2zxw X 6 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR 54 15 25 35 45 Chain Y from PDB Type:PROTEIN Length:46 aligned with COX7C_BOVIN | P00430 from UniProtKB/Swiss-Prot Length:63 Alignment length:46 27 37 47 57 COX7C_BOVIN 18 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK 63 SCOP domains d2zxwy_ Y: SCOP domains CATH domains 2zxwY00 Y:2-47 Cytochrome C Oxidase, chain L CATH domains Pfam domains (1) COX7C-2zxwY01 Y:2-47 Pfam domains (1) Pfam domains (2) COX7C-2zxwY02 Y:2-47 Pfam domains (2) SAPs(SNPs) ---------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------- PROSITE Transcript ---------------------------------------------- Transcript 2zxw Y 2 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK 47 11 21 31 41 Chain Z from PDB Type:PROTEIN Length:43 aligned with COX8B_BOVIN | P10175 from UniProtKB/Swiss-Prot Length:70 Alignment length:43 34 44 54 64 COX8B_BOVIN 25 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS 67 SCOP domains d2zxwz_ Z: automated matches SCOP domains CATH domains 2zxwZ00 Z:1-43 CATH domains Pfam domains (1) COX8-2zxwZ01 Z:1-43 Pfam domains (1) Pfam domains (2) COX8-2zxwZ02 Z:1-43 Pfam domains (2) SAPs(SNPs) ------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------- PROSITE Transcript ------------------------------------------- Transcript 2zxw Z 1 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS 43 10 20 30 40
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit(hide GO term definitions) Chain A,N (COX1_BOVIN | P00396)
Chain B,O (COX2_BOVIN | P68530)
Chain C,P (COX3_BOVIN | P00415)
Chain D,Q (COX41_BOVIN | P00423)
Chain E,R (COX5A_BOVIN | P00426)
Chain F,S (COX5B_BOVIN | P00428)
Chain G,T (CX6A2_BOVIN | P07471)
Chain H,U (CX6B1_BOVIN | P00429)
Chain I,V (COX6C_BOVIN | P04038)
Chain J,W (CX7A1_BOVIN | P07470)
Chain K,X (COX7B_BOVIN | P13183)
Chain L,Y (COX7C_BOVIN | P00430)
Chain M,Z (COX8B_BOVIN | P10175)
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