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Asym. Unit
Info
Asym.Unit (671 KB)
Biol.Unit 1 (331 KB)
Biol.Unit 2 (328 KB)
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(1)
Title
:
BOVINE HEART CYTOCHROME C OXIDASE AT THE FULLY OXIDIZED STATE (1-S X-RAY EXPOSURE DATASET)
Authors
:
H. Aoyama, K. Muramoto, K. Shinzawa-Itoh, K. Hirata, E. Yamashita, T. T T. Ogura, S. Yoshikawa
Date
:
08 Jan 09 (Deposition) - 24 Feb 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M (1x)
Biol. Unit 2: N,O,P,Q,R,S,T,U,V,W,X,Y,Z (1x)
Keywords
:
Oxidoreductase, Electron Transport, Formylation, Heme, Iron, Membrane, Metal-Binding, Mitochondrion, Mitochondrion Inner Membrane, Respiratory Chain, Transmembrane, Transport, Transit Peptide
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Aoyama, K. Muramoto, K. Shinzawa-Itoh, K. Hirata, E. Yamashita, T. Tsukihara, T. Ogura, S. Yoshikawa
A Peroxide Bridge Between Fe And Cu Ions In The O2 Reductio Site Of Fully Oxidized Cytochrome C Oxidase Could Suppress The Proton Pump
Proc. Natl. Acad. Sci. Usa V. 106 2165 2009
[
close entry info
]
Hetero Components
(17, 62)
Info
All Hetero Components
01a: CARDIOLIPIN (CDLa)
01b: CARDIOLIPIN (CDLb)
01c: CARDIOLIPIN (CDLc)
01d: CARDIOLIPIN (CDLd)
02a: CHOLIC ACID (CHDa)
02b: CHOLIC ACID (CHDb)
02c: CHOLIC ACID (CHDc)
02d: CHOLIC ACID (CHDd)
02e: CHOLIC ACID (CHDe)
02f: CHOLIC ACID (CHDf)
02g: CHOLIC ACID (CHDg)
02h: CHOLIC ACID (CHDh)
04a: DINUCLEAR COPPER ION (CUAa)
04b: DINUCLEAR COPPER ION (CUAb)
03a: COPPER (II) ION (CUa)
04b: COPPER (II) ION (CUb)
05a: DECYL-BETA-D-MALTOPYRANOSIDE (DMUa)
05b: DECYL-BETA-D-MALTOPYRANOSIDE (DMUb)
05c: DECYL-BETA-D-MALTOPYRANOSIDE (DMUc)
05d: DECYL-BETA-D-MALTOPYRANOSIDE (DMUd)
06a: N-FORMYLMETHIONINE (FMEa)
06b: N-FORMYLMETHIONINE (FMEb)
06c: N-FORMYLMETHIONINE (FMEc)
06d: N-FORMYLMETHIONINE (FMEd)
07a: HEME-A (HEAa)
07b: HEME-A (HEAb)
07c: HEME-A (HEAc)
07d: HEME-A (HEAd)
08a: MAGNESIUM ION (MGa)
08b: MAGNESIUM ION (MGb)
09a: SODIUM ION (NAa)
09b: SODIUM ION (NAb)
10a: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKa)
10b: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKb)
10c: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKc)
10d: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKd)
10e: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKe)
10f: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKf)
11a: PEROXIDE ION (PERa)
11b: PEROXIDE ION (PERb)
12a: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVa)
12b: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVb)
12c: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVc)
12d: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVd)
12e: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVe)
12f: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVf)
12g: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVg)
12h: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVh)
13a: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIME... (PSCa)
13b: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIME... (PSCb)
14a: TRISTEAROYLGLYCEROL (TGLa)
14b: TRISTEAROYLGLYCEROL (TGLb)
14c: TRISTEAROYLGLYCEROL (TGLc)
14d: TRISTEAROYLGLYCEROL (TGLd)
14e: TRISTEAROYLGLYCEROL (TGLe)
14f: TRISTEAROYLGLYCEROL (TGLf)
15a: PHOSPHOTHREONINE (TPOa)
15b: PHOSPHOTHREONINE (TPOb)
16a: UNKNOWN ATOM OR ION (UNXa)
16b: UNKNOWN ATOM OR ION (UNXb)
17a: ZINC ION (ZNa)
17b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CDL
4
Ligand/Ion
CARDIOLIPIN
2
CHD
8
Ligand/Ion
CHOLIC ACID
3
CU
2
Ligand/Ion
COPPER (II) ION
4
CUA
2
Ligand/Ion
DINUCLEAR COPPER ION
5
DMU
4
Ligand/Ion
DECYL-BETA-D-MALTOPYRANOSIDE
6
FME
4
Mod. Amino Acid
N-FORMYLMETHIONINE
7
HEA
4
Ligand/Ion
HEME-A
8
MG
2
Ligand/Ion
MAGNESIUM ION
9
NA
2
Ligand/Ion
SODIUM ION
10
PEK
6
Ligand/Ion
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
11
PER
2
Ligand/Ion
PEROXIDE ION
12
PGV
8
Ligand/Ion
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
13
PSC
2
Ligand/Ion
(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
14
TGL
6
Ligand/Ion
TRISTEAROYLGLYCEROL
15
TPO
2
Mod. Amino Acid
PHOSPHOTHREONINE
16
UNX
2
Ligand/Ion
UNKNOWN ATOM OR ION
17
ZN
2
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(56, 56)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:240 , HIS A:290 , HIS A:291 , PER A:520
BINDING SITE FOR RESIDUE CU A 517
02
AC2
SOFTWARE
HIS A:240 , VAL A:243 , HIS A:291 , HEA A:516 , CU A:517
BINDING SITE FOR RESIDUE PER A 520
03
AC3
SOFTWARE
HIS A:368 , ASP A:369 , HOH A:2033 , GLU B:198 , HOH B:2031 , HOH B:2032
BINDING SITE FOR RESIDUE MG A 518
04
AC4
SOFTWARE
GLU A:40 , GLY A:45 , SER A:441 , HOH A:2026
BINDING SITE FOR RESIDUE NA A 519
05
AC5
SOFTWARE
ALA A:24 , GLY A:27 , MET A:28 , THR A:31 , SER A:34 , ILE A:37 , ARG A:38 , TYR A:54 , HIS A:61 , ALA A:62 , MET A:65 , VAL A:70 , GLY A:125 , TRP A:126 , TYR A:371 , PHE A:377 , HIS A:378 , LEU A:381 , SER A:382 , PHE A:393 , PHE A:425 , GLN A:428 , ARG A:438 , ARG A:439 , MET A:468 , HOH A:2005 , HOH A:2036 , HOH A:2044
BINDING SITE FOR RESIDUE HEA A 515
06
AC6
SOFTWARE
TRP A:126 , TRP A:236 , VAL A:243 , TYR A:244 , HIS A:290 , HIS A:291 , THR A:309 , ALA A:313 , THR A:316 , GLY A:317 , GLY A:352 , GLY A:355 , ILE A:356 , LEU A:358 , ALA A:359 , ASP A:364 , HIS A:368 , VAL A:373 , HIS A:376 , PHE A:377 , VAL A:380 , LEU A:381 , ARG A:438 , PER A:520 , HOH A:2007 , HOH A:2016 , HOH A:2034 , PRO B:69 , ILE B:72
BINDING SITE FOR RESIDUE HEA A 516
07
AC7
SOFTWARE
ASN A:406 , THR A:408 , TRP A:409 , THR D:80 , PHE D:87 , HIS K:10 , GLN M:15 , ALA M:16 , LEU M:19 , SER M:20 , HOH M:2148
BINDING SITE FOR RESIDUE PGV A 524
08
AC8
SOFTWARE
PHE A:94 , PRO A:95 , ARG A:96 , MET A:97 , HOH A:2134 , HOH A:2218 , HIS C:9 , VAL C:11 , ASN C:50 , MET C:54 , TRP C:57 , TRP C:58 , GLU C:64 , HIS C:71 , LEU C:79
BINDING SITE FOR RESIDUE PGV A 521
09
AC9
SOFTWARE
HIS B:161 , CYS B:196 , GLU B:198 , CYS B:200 , HIS B:204 , MET B:207
BINDING SITE FOR RESIDUE CUA B 228
10
BC1
SOFTWARE
TYR A:379 , ASN A:422 , HIS A:429 , PHE A:430 , LEU A:433 , HOH A:4408 , LEU B:7 , GLY B:8 , LEU B:28 , VAL B:31 , PHE B:32 , SER B:35 , LEU B:39 , HOH B:4158 , HOH I:2365
BINDING SITE FOR RESIDUE TGL B 521
11
BC2
SOFTWARE
HIS A:328 , ILE B:41 , MET B:45 , HIS B:52 , MET B:56 , ASP B:57 , TRP B:65 , ASP E:8 , PHE E:11 , LEU E:41 , ARG I:10 , ALA I:14 , LEU I:17 , HOH I:4259
BINDING SITE FOR RESIDUE PSC B 230
12
BC3
SOFTWARE
MET A:271 , GLN B:59 , GLU B:62 , THR B:63 , THR B:66 , HOH B:2364 , PEK P:1265 , ARG T:14 , ARG T:17 , PHE T:18 , PHE T:21 , HOH T:3293
BINDING SITE FOR RESIDUE CHD B1086
13
BC4
SOFTWARE
TRP C:34 , MET C:40 , HOH C:4215 , GLY G:63
BINDING SITE FOR RESIDUE DMU C 272
14
BC5
SOFTWARE
HIS C:148 , HIS C:232 , GLU C:236 , HOH C:2027
BINDING SITE FOR RESIDUE UNX C 262
15
BC6
SOFTWARE
HIS A:233 , ASP A:300 , THR A:301 , TYR A:304 , TRP C:99 , HIS C:103 , PGV C:268 , HOH C:4413
BINDING SITE FOR RESIDUE CHD C 525
16
BC7
SOFTWARE
LYS C:157 , HIS C:158 , TYR C:172 , HOH C:4190 , LYS G:5 , ARG G:17 , PHE G:21 , CHD G:86 , CDL G:269 , GLN O:59
BINDING SITE FOR RESIDUE PEK C 265
17
BC8
SOFTWARE
TRP C:58 , VAL C:61 , SER C:65 , THR C:66 , HIS C:207 , ILE C:210 , PHE C:214 , ARG C:221 , HIS C:226 , PHE C:227 , THR C:228 , HIS C:231 , HIS C:232 , PHE C:233 , GLY C:234 , CDL C:270 , HOH C:2206 , HOH C:2340 , HOH F:2127
BINDING SITE FOR RESIDUE PGV C 267
18
BC9
SOFTWARE
ASP A:298 , TRP C:99 , TYR C:102 , HIS C:103 , CHD C:525 , HOH C:4330 , HOH C:4467 , ASN H:22 , ASN H:24 , ALA T:1
BINDING SITE FOR RESIDUE PGV C 268
19
CC1
SOFTWARE
MET C:51 , LEU C:52 , TYR C:55 , TRP C:58 , ARG C:59 , ARG C:63 , PHE C:67 , THR C:213 , LYS C:224 , HIS C:226 , PGV C:267 , LYS J:8
BINDING SITE FOR RESIDUE CDL C 270
20
CC2
SOFTWARE
ARG C:156 , LEU C:160 , PHE C:164 , LEU C:223 , PHE J:1
BINDING SITE FOR RESIDUE CHD C 271
21
CC3
SOFTWARE
TRP A:334 , GLY A:343 , LYS A:411 , PHE A:414 , ILE B:42 , THR B:47 , ARG D:73 , GLU D:77 , TRP D:78 , HOH D:4372 , ARG I:16
BINDING SITE FOR RESIDUE TGL D 523
22
CC4
SOFTWARE
CYS F:60 , CYS F:62 , CYS F:82 , CYS F:85
BINDING SITE FOR RESIDUE ZN F 99
23
CC5
SOFTWARE
HIS A:151 , TYR C:181 , TYR C:182 , ALA C:184 , PHE C:186 , THR C:187 , ILE C:188 , PHE C:198 , GLY C:202 , TRP G:62 , THR G:68 , PHE G:69 , PHE G:70 , HIS G:71 , ASN G:76 , HOH G:2246
BINDING SITE FOR RESIDUE PEK G 264
24
CC6
SOFTWARE
LEU C:127 , LEU C:131 , LEU C:138 , VAL C:254 , PEK C:265 , LEU G:23 , SER G:27 , LEU G:30 , CYS G:31 , ASN G:34 , HIS G:38 , ARG G:42 , HOH G:4294 , HOH G:4350 , PHE N:282 , ASP N:300 , SER N:307 , ILE N:311 , ALA O:77 , LEU O:78 , TYR O:85
BINDING SITE FOR RESIDUE CDL G 269
25
CC7
SOFTWARE
PEK C:265 , ARG G:14 , ARG G:17 , PHE G:21 , HOH G:2293 , HOH G:3364 , MET N:271 , GLU O:62 , THR O:63 , THR O:66
BINDING SITE FOR RESIDUE CHD G 86
26
CC8
SOFTWARE
SER G:2 , ALA G:3 , LYS G:5 , GLY G:6 , HIS G:8 , HOH G:4260 , HOH G:4445 , LYS P:77 , ARG P:80 , ILE P:84 , PHE P:98 , TRP P:240 , PHE P:244 , VAL P:247
BINDING SITE FOR RESIDUE PEK G1263
27
CC9
SOFTWARE
TYR J:32 , ARG J:33 , MET J:36 , THR J:37 , LEU J:40
BINDING SITE FOR RESIDUE CHD J 60
28
DC1
SOFTWARE
THR A:17 , LEU A:18 , LEU A:20 , LEU A:21 , PHE A:22 , TRP A:25 , TRP A:81 , LEU A:113 , PHE A:400 , ILE A:472 , ILE L:11 , PRO L:12 , PHE L:13 , SER L:14 , ARG L:20 , MET L:24 , PHE L:29 , HOH L:4322
BINDING SITE FOR RESIDUE TGL L 522
29
DC2
SOFTWARE
LEU A:35 , TRP D:98 , TYR D:102 , LEU M:28 , GLY M:31 , TRP M:32 , TYR M:35 , HIS M:36
BINDING SITE FOR RESIDUE DMU M 526
30
DC3
SOFTWARE
HIS N:240 , HIS N:290 , HIS N:291 , PER N:520
BINDING SITE FOR RESIDUE CU N 517
31
DC4
SOFTWARE
HIS N:240 , VAL N:243 , HIS N:291 , HEA N:516 , CU N:517
BINDING SITE FOR RESIDUE PER N 520
32
DC5
SOFTWARE
HIS N:368 , ASP N:369 , GLU O:198 , HOH O:3031 , HOH O:3032 , HOH O:3033
BINDING SITE FOR RESIDUE MG N1518
33
DC6
SOFTWARE
GLU N:40 , GLY N:45 , SER N:441 , HOH N:3026
BINDING SITE FOR RESIDUE NA N1519
34
DC7
SOFTWARE
MET N:28 , THR N:31 , SER N:34 , ILE N:37 , ARG N:38 , TYR N:54 , VAL N:58 , HIS N:61 , ALA N:62 , MET N:65 , VAL N:70 , GLY N:125 , TRP N:126 , TYR N:371 , PHE N:377 , HIS N:378 , SER N:382 , VAL N:386 , PHE N:425 , GLN N:428 , ARG N:438 , ARG N:439 , MET N:468 , HOH N:3005 , HOH N:3036 , HOH N:3044
BINDING SITE FOR RESIDUE HEA N 515
35
DC8
SOFTWARE
TRP N:126 , TRP N:236 , VAL N:243 , TYR N:244 , HIS N:290 , HIS N:291 , THR N:309 , THR N:316 , GLY N:317 , GLY N:352 , LEU N:353 , GLY N:355 , LEU N:358 , ALA N:359 , ASP N:364 , HIS N:368 , VAL N:373 , HIS N:376 , PHE N:377 , VAL N:380 , LEU N:381 , ARG N:438 , PER N:520 , HOH N:3007 , HOH N:3016 , HOH N:3034 , ILE O:72
BINDING SITE FOR RESIDUE HEA N 516
36
DC9
SOFTWARE
ASN N:422 , PHE N:426 , HIS N:429 , PHE N:430 , LEU N:433 , LEU O:7 , GLY O:8 , LEU O:28 , PHE O:32 , SER O:35 , LEU O:39 , HOH O:4111 , ARG V:43
BINDING SITE FOR RESIDUE TGL N1521
37
EC1
SOFTWARE
THR N:17 , LEU N:18 , LEU N:20 , LEU N:21 , TRP N:25 , TRP N:81 , LEU N:113 , PHE N:400 , ILE N:472 , HOH N:4461 , ILE Y:11 , PRO Y:12 , PHE Y:13 , SER Y:14 , ARG Y:20 , MET Y:24 , MET Y:25 , PHE Y:28 , PHE Y:29
BINDING SITE FOR RESIDUE TGL N1522
38
EC2
SOFTWARE
ASN N:406 , THR N:408 , TRP N:409 , HOH N:4082 , THR Q:80 , ALA Q:84 , PHE Q:87 , HIS X:10 , PRO Z:12 , GLN Z:15 , SER Z:20 , HOH Z:3148
BINDING SITE FOR RESIDUE PGV N1524
39
EC3
SOFTWARE
PHE N:94 , PRO N:95 , ARG N:96 , MET N:97 , MET N:100 , HOH N:3134 , HOH N:3218 , HIS P:9 , ASN P:50 , MET P:54 , TRP P:57 , TRP P:58 , GLU P:64 , HIS P:71 , LEU P:79 , GLY P:82 , GLU P:90 , PEK P:1264 , HOH P:4474
BINDING SITE FOR RESIDUE PGV N1266
40
EC4
SOFTWARE
ALA G:1 , HOH G:4260 , ASP N:298 , HOH N:4075 , HOH N:4320 , TRP P:99 , HIS P:103 , CHD P:1525 , ASN U:22 , ASN U:24
BINDING SITE FOR RESIDUE PGV N1268
41
EC5
SOFTWARE
HIS O:161 , CYS O:196 , GLU O:198 , CYS O:200 , HIS O:204 , MET O:207
BINDING SITE FOR RESIDUE CUA O 228
42
EC6
SOFTWARE
TRP N:334 , GLY N:343 , LYS N:411 , PHE N:414 , ILE O:42 , THR O:47 , LYS O:49 , ARG Q:73 , GLU Q:77 , TRP Q:78
BINDING SITE FOR RESIDUE TGL O1523
43
EC7
SOFTWARE
PHE N:321 , HIS N:328 , LEU O:37 , ILE O:41 , HIS O:52 , MET O:56 , ASP O:57 , TRP O:65 , HOH O:4281 , HOH O:4457 , ASP R:8 , PHE R:11 , ASP R:40 , ARG V:10 , ALA V:14
BINDING SITE FOR RESIDUE PSC O1230
44
EC8
SOFTWARE
TRP P:34 , MET P:40 , HOH P:4286 , TRP T:62 , GLY T:63
BINDING SITE FOR RESIDUE DMU P1272
45
EC9
SOFTWARE
HIS P:148 , HIS P:232 , GLU P:236 , HOH P:3027
BINDING SITE FOR RESIDUE UNX P1262
46
FC1
SOFTWARE
HIS N:233 , THR N:301 , TYR N:304 , PGV N:1268 , TRP P:99 , HIS P:103
BINDING SITE FOR RESIDUE CHD P1525
47
FC2
SOFTWARE
HIS N:151 , PGV N:1266 , TYR P:181 , TYR P:182 , ALA P:184 , PHE P:186 , THR P:187 , ILE P:188 , PHE P:198 , THR T:68 , PHE T:69 , PHE T:70 , HIS T:71 , ASN T:76
BINDING SITE FOR RESIDUE PEK P1264
48
FC3
SOFTWARE
GLN B:59 , CHD B:1086 , HOH B:4140 , LYS P:157 , HIS P:158 , THR P:168 , HOH P:4099 , HOH P:4368 , ARG T:17 , CDL T:1269
BINDING SITE FOR RESIDUE PEK P1265
49
FC4
SOFTWARE
MET P:54 , TRP P:58 , VAL P:61 , SER P:65 , THR P:66 , HIS P:207 , ILE P:210 , PHE P:214 , ARG P:221 , HIS P:226 , PHE P:227 , THR P:228 , HIS P:231 , HIS P:232 , PHE P:233 , GLY P:234 , CDL P:1270 , HOH P:3206 , HOH P:3340 , HOH S:3127
BINDING SITE FOR RESIDUE PGV P1267
50
FC5
SOFTWARE
MET P:51 , MET P:54 , TYR P:55 , TRP P:58 , ARG P:59 , ARG P:63 , PHE P:67 , THR P:213 , ILE P:216 , VAL P:217 , PHE P:220 , LYS P:224 , HIS P:226 , PGV P:1267 , HOH P:3158 , LYS W:8 , THR W:27
BINDING SITE FOR RESIDUE CDL P1270
51
FC6
SOFTWARE
ARG P:156 , LEU P:160 , PHE P:164 , LEU P:223 , PHE W:1
BINDING SITE FOR RESIDUE CHD P1271
52
FC7
SOFTWARE
CYS S:60 , CYS S:62 , CYS S:82 , CYS S:85
BINDING SITE FOR RESIDUE ZN S 99
53
FC8
SOFTWARE
LYS C:77 , ARG C:80 , TYR C:81 , ILE C:84 , LEU C:85 , VAL C:91 , TRP C:240 , PHE C:244 , VAL C:247 , SER T:2 , ALA T:3 , LYS T:5 , GLY T:6 , HIS T:8
BINDING SITE FOR RESIDUE PEK T 263
54
FC9
SOFTWARE
PHE A:282 , ASP A:300 , SER A:307 , ILE A:311 , LEU B:73 , ALA B:77 , LEU B:78 , LEU B:81 , LEU P:127 , LEU P:131 , TYR P:253 , PEK P:1265 , LEU T:23 , SER T:27 , LEU T:30 , CYS T:31 , ASN T:34 , LEU T:37 , HIS T:38 , HOH T:4366
BINDING SITE FOR RESIDUE CDL T1269
55
GC1
SOFTWARE
LEU N:7 , TYR W:32 , ARG W:33 , MET W:36 , THR W:37
BINDING SITE FOR RESIDUE CHD W1060
56
GC2
SOFTWARE
LEU N:35 , TRP Q:98 , TYR Q:102 , LEU Z:27 , LEU Z:28 , GLY Z:31 , TRP Z:32 , TYR Z:35 , HIS Z:36
BINDING SITE FOR RESIDUE DMU Z1526
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(9, 18)
Info
All PROSITE Patterns/Profiles
1: COX2_TM (B:1-91,O:1-91)
2: COX1 (A:1-514,N:1-514)
3: COX3 (C:4-261,P:4-261)
4: CHCH (H:26-72,U:26-72)
5: COX6A (G:55-72,T:55-72)
6: COX2_CUA (B:92-225,O:92-225)
7: COX5B_1 (F:69-91,S:69-91)
8: COX2 (B:159-207,O:159-207)
9: COX1_CUB (A:236-291,N:236-291)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
COX2_TM
PS50999
Cytochrome oxidase subunit II transmembrane region profile.
COX2_BOVIN
1-91
2
B:1-91
O:1-91
2
COX1
PS50855
Cytochrome oxidase subunit I profile.
COX1_BOVIN
1-514
2
A:1-514
N:1-514
3
COX3
PS50253
Heme-copper oxidase subunit III family profile.
COX3_BOVIN
4-261
2
C:4-261
P:4-261
4
CHCH
PS51808
Coiled coil-helix-coiled coil-helix (CHCH) domain profile.
CX6B1_BOVIN
27-73
2
H:26-72
U:26-72
5
COX6A
PS01329
Cytochrome c oxidase subunit VIa signature.
CX6A2_BOVIN
67-84
2
G:55-72
T:55-72
6
COX2_CUA
PS50857
Cytochrome oxidase subunit II copper A binding domain profile.
COX2_BOVIN
92-225
2
B:92-225
O:92-225
7
COX5B_1
PS00848
Cytochrome c oxidase subunit Vb, zinc binding region signature.
COX5B_BOVIN
100-122
2
F:69-91
S:69-91
8
COX2
PS00078
CO II and nitrous oxide reductase dinuclear copper centers signature.
COX2_BOVIN
159-207
2
B:159-207
O:159-207
9
COX1_CUB
PS00077
Heme-copper oxidase catalytic subunit, copper B binding region signature.
COX1_BOVIN
236-291
2
A:236-291
N:236-291
[
close PROSITE info
]
Exons
(11, 22)
Info
All Exons
Exon 1.2 (I:3-36 | V:3-36)
Exon 1.3 (I:37-73 | V:37-73)
Exon 2.2 (J:1-13 | W:1-13)
Exon 2.3 (J:14-42 | W:14-42)
Exon 2.4 (J:42-57 | W:42-57)
Exon 3.2 (E:6-32 | R:6-32)
Exon 3.3 (E:32-72 | R:32-72)
Exon 3.4 (E:73-109 | R:73-109)
Exon 4.1 (G:1-13 | T:1-13)
Exon 4.2 (G:13-58 | T:13-58)
Exon 4.3 (G:59-84 | T:59-84)
View:
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All Exon Boundaries
01: Boundary 1.1/1.2
02: Boundary 1.2/1.3
03: Boundary 1.3/1.4
04: Boundary 2.1/2.2
05: Boundary 2.2/2.3
06: Boundary 2.3/2.4
07: Boundary 2.4/-
08: Boundary 3.1/3.2
09: Boundary 3.2/3.3
10: Boundary 3.3/3.4
11: Boundary 3.4/3.5
12: Boundary -/4.1
13: Boundary 4.1/4.2
14: Boundary 4.2/4.3
15: Boundary 4.3/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000018778
1
ENSBTAE00000392730
chr14:
62538824-62538908
85
COX6C_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000018778
2
ENSBTAE00000152930
chr14:
62539837-62539968
132
COX6C_BOVIN
1-37
37
2
I:3-36
V:3-36
34
34
1.3
ENSBTAT00000018778
3
ENSBTAE00000152932
chr14:
62540912-62541039
128
COX6C_BOVIN
38-74
37
2
I:37-73
V:37-73
37
37
1.4
ENSBTAT00000018778
4
ENSBTAE00000382779
chr14:
62548625-62548744
120
COX6C_BOVIN
-
0
0
-
-
2.1
ENSBTAT00000019808
1
ENSBTAE00000161251
chr18:
46232862-46232802
61
CX7A1_BOVIN
1-5
5
0
-
-
2.2
ENSBTAT00000019808
2
ENSBTAE00000161252
chr18:
46232104-46232018
87
CX7A1_BOVIN
6-34
29
2
J:1-13
W:1-13
13
13
2.3
ENSBTAT00000019808
3
ENSBTAE00000161253
chr18:
46231883-46231799
85
CX7A1_BOVIN
35-63
29
2
J:14-42
W:14-42
29
29
2.4
ENSBTAT00000019808
4
ENSBTAE00000161254
chr18:
46231418-46231281
138
CX7A1_BOVIN
63-80
18
2
J:42-57
W:42-57
16
16
3.1
ENSBTAT00000022949
1
ENSBTAE00000344359
chr21:
33835267-33835426
160
COX5A_BOVIN
1-36
36
0
-
-
3.2
ENSBTAT00000022949
2
ENSBTAE00000187373
chr21:
33840320-33840436
117
COX5A_BOVIN
36-75
40
2
E:6-32
R:6-32
27
27
3.3
ENSBTAT00000022949
3
ENSBTAE00000187374
chr21:
33842603-33842724
122
COX5A_BOVIN
75-115
41
2
E:32-72
R:32-72
41
41
3.4
ENSBTAT00000022949
4
ENSBTAE00000187376
chr21:
33843979-33844143
165
COX5A_BOVIN
116-152
37
2
E:73-109
R:73-109
37
37
3.5
ENSBTAT00000022949
5
ENSBTAE00000187379
chr21:
33846054-33846214
161
COX5A_BOVIN
-
0
0
-
-
4.1
ENSBTAT00000026002
1
ENSBTAE00000425992
chr25:
29305227-29305113
115
CX6A2_BOVIN
1-25
25
2
G:1-13
T:1-13
13
13
4.2
ENSBTAT00000026002
2
ENSBTAE00000211646
chr25:
29304966-29304830
137
CX6A2_BOVIN
25-70
46
2
G:13-58
T:13-58
46
46
4.3
ENSBTAT00000026002
3
ENSBTAE00000211652
chr25:
29304732-29304604
129
CX6A2_BOVIN
71-97
27
2
G:59-84
T:59-84
26
26
[
close EXON info
]
SCOP Domains
(14, 28)
Info
All SCOP Domains
01a: SCOP_d2zxwe_ (E:)
01b: SCOP_d2zxwr_ (R:)
02a: SCOP_d2zxwh_ (H:)
02b: SCOP_d2zxwu_ (U:)
03a: SCOP_d2zxwb2 (B:91-227)
03b: SCOP_d2zxwo2 (O:91-227)
04a: SCOP_d2zxwa_ (A:)
04b: SCOP_d2zxwn_ (N:)
05a: SCOP_d2zxwc_ (C:)
05b: SCOP_d2zxwp_ (P:)
06a: SCOP_d2zxwd_ (D:)
06b: SCOP_d2zxwq_ (Q:)
07a: SCOP_d2zxwg_ (G:)
07b: SCOP_d2zxwt_ (T:)
08a: SCOP_d2zxwi_ (I:)
08b: SCOP_d2zxwv_ (V:)
09a: SCOP_d2zxwj_ (J:)
09b: SCOP_d2zxww_ (W:)
10a: SCOP_d2zxwk_ (K:)
10b: SCOP_d2zxwx_ (X:)
11a: SCOP_d2zxwl_ (L:)
11b: SCOP_d2zxwy_ (Y:)
12a: SCOP_d2zxwm_ (M:)
12b: SCOP_d2zxwz_ (Z:)
13a: SCOP_d2zxwb1 (B:1-90)
13b: SCOP_d2zxwo1 (O:1-90)
14a: SCOP_d2zxwf_ (F:)
14b: SCOP_d2zxws_ (S:)
View:
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Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
Cytochrome c oxidase subunit E
(25)
Family
:
Cytochrome c oxidase subunit E
(25)
Protein domain
:
Cytochrome c oxidase subunit E
(24)
Cow (Bos taurus) [TaxId: 9913]
(24)
01a
d2zxwe_
E:
01b
d2zxwr_
R:
Fold
:
Cytochrome c oxidase subunit h
(26)
Superfamily
:
Cytochrome c oxidase subunit h
(26)
Family
:
Cytochrome c oxidase subunit h
(26)
Protein domain
:
automated matches
(18)
Cow (Bos taurus) [TaxId: 9913]
(18)
02a
d2zxwh_
H:
02b
d2zxwu_
U:
Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
Periplasmic domain of cytochrome c oxidase subunit II
(70)
Protein domain
:
Cytochrome c oxidase
(62)
Cow (Bos taurus) [TaxId: 9913]
(24)
03a
d2zxwb2
B:91-227
03b
d2zxwo2
O:91-227
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Cytochrome c oxidase subunit I-like
(65)
Superfamily
:
Cytochrome c oxidase subunit I-like
(65)
Family
:
Cytochrome c oxidase subunit I-like
(65)
Protein domain
:
automated matches
(24)
Cow (Bos taurus) [TaxId: 9913]
(18)
04a
d2zxwa_
A:
04b
d2zxwn_
N:
Fold
:
Cytochrome c oxidase subunit III-like
(29)
Superfamily
:
Cytochrome c oxidase subunit III-like
(29)
Family
:
Cytochrome c oxidase subunit III-like
(29)
Protein domain
:
Mitochondrial cytochrome c oxidase, subunit III
(25)
Cow (Bos taurus) [TaxId: 9913]
(25)
05a
d2zxwc_
C:
05b
d2zxwp_
P:
Fold
:
Single transmembrane helix
(568)
Superfamily
:
Mitochondrial cytochrome c oxidase subunit IV
(26)
Family
:
Mitochondrial cytochrome c oxidase subunit IV
(26)
Protein domain
:
automated matches
(18)
Cow (Bos taurus) [TaxId: 9913]
(18)
06a
d2zxwd_
D:
06b
d2zxwq_
Q:
Superfamily
:
Mitochondrial cytochrome c oxidase subunit VIa
(25)
Family
:
Mitochondrial cytochrome c oxidase subunit VIa
(25)
Protein domain
:
Mitochondrial cytochrome c oxidase subunit VIa
(24)
Cow (Bos taurus) [TaxId: 9913]
(24)
07a
d2zxwg_
G:
07b
d2zxwt_
T:
Superfamily
:
Mitochondrial cytochrome c oxidase subunit VIc
(25)
Family
:
Mitochondrial cytochrome c oxidase subunit VIc
(25)
Protein domain
:
Mitochondrial cytochrome c oxidase subunit VIc
(25)
Cow (Bos taurus) [TaxId: 9913]
(25)
08a
d2zxwi_
I:
08b
d2zxwv_
V:
Superfamily
:
Mitochondrial cytochrome c oxidase subunit VIIa
(25)
Family
:
Mitochondrial cytochrome c oxidase subunit VIIa
(25)
Protein domain
:
Mitochondrial cytochrome c oxidase subunit VIIa
(24)
Cow (Bos taurus) [TaxId: 9913]
(24)
09a
d2zxwj_
J:
09b
d2zxww_
W:
Superfamily
:
Mitochondrial cytochrome c oxidase subunit VIIb
(26)
Family
:
Mitochondrial cytochrome c oxidase subunit VIIb
(26)
Protein domain
:
automated matches
(18)
Cow (Bos taurus) [TaxId: 9913]
(18)
10a
d2zxwk_
K:
10b
d2zxwx_
X:
Superfamily
:
Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
(25)
Family
:
Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
(25)
Protein domain
:
Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
(24)
Cow (Bos taurus) [TaxId: 9913]
(24)
11a
d2zxwl_
L:
11b
d2zxwy_
Y:
Superfamily
:
Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
(26)
Family
:
Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
(26)
Protein domain
:
automated matches
(18)
Cow (Bos taurus) [TaxId: 9913]
(18)
12a
d2zxwm_
M:
12b
d2zxwz_
Z:
Fold
:
Transmembrane helix hairpin
(84)
Superfamily
:
Cytochrome c oxidase subunit II-like, transmembrane region
(66)
Family
:
Cytochrome c oxidase subunit II-like, transmembrane region
(57)
Protein domain
:
Mitochondrial cytochrome c oxidase, subunit II
(24)
Cow (Bos taurus) [TaxId: 9913]
(24)
13a
d2zxwb1
B:1-90
13b
d2zxwo1
O:1-90
Class
:
Small proteins
(3458)
Fold
:
Rubredoxin-like
(572)
Superfamily
:
Rubredoxin-like
(127)
Family
:
Cytochrome c oxidase Subunit F
(25)
Protein domain
:
Cytochrome c oxidase Subunit F
(24)
Cow (Bos taurus) [TaxId: 9913]
(24)
14a
d2zxwf_
F:
14b
d2zxws_
S:
[
close SCOP info
]
CATH Domains
(15, 30)
Info
all CATH domains
01a: CATH_2zxwG00 (G:1-84)
01b: CATH_2zxwT00 (T:1-84)
02a: CATH_2zxwI00 (I:3-73)
02b: CATH_2zxwV00 (V:3-73)
03a: CATH_2zxwJ00 (J:1-57)
03b: CATH_2zxwW00 (W:1-57)
04a: CATH_2zxwK00 (K:6-54)
04b: CATH_2zxwX00 (X:6-54)
05a: CATH_2zxwL00 (L:2-47)
05b: CATH_2zxwY00 (Y:2-47)
06a: CATH_2zxwM00 (M:1-43)
06b: CATH_2zxwZ00 (Z:1-43)
07a: CATH_2zxwE00 (E:6-109)
07b: CATH_2zxwR00 (R:6-109)
08a: CATH_2zxwH00 (H:11-85)
08b: CATH_2zxwU00 (U:11-85)
09a: CATH_2zxwD00 (D:4-147)
09b: CATH_2zxwQ00 (Q:4-147)
10a: CATH_2zxwC01 (C:3-70)
10b: CATH_2zxwP01 (P:3-70)
11a: CATH_2zxwB01 (B:2-91)
11b: CATH_2zxwO01 (O:2-91)
12a: CATH_2zxwA00 (A:2-514)
12b: CATH_2zxwN00 (N:2-514)
13a: CATH_2zxwC02 (C:71-261)
13b: CATH_2zxwP02 (P:71-261)
14a: CATH_2zxwF00 (F:4-96)
14b: CATH_2zxwS00 (S:4-96)
15a: CATH_2zxwB02 (B:92-227)
15b: CATH_2zxwO02 (O:92-227)
View:
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Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Few Secondary Structures
(1120)
Architecture
:
Irregular
(1120)
Topology
:
Cytochrome C Oxidase; Chain G
(22)
Homologous Superfamily
:
Cytochrome C Oxidase, chain G
(22)
Cattle (Bos taurus)
(15)
01a
2zxwG00
G:1-84
01b
2zxwT00
T:1-84
Topology
:
Cytochrome C Oxidase; Chain I
(22)
Homologous Superfamily
:
Cytochrome C Oxidase, chain I
(22)
Cattle (Bos taurus)
(15)
02a
2zxwI00
I:3-73
02b
2zxwV00
V:3-73
Topology
:
Cytochrome C Oxidase; Chain J
(22)
Homologous Superfamily
:
Cytochrome C Oxidase, chain J
(22)
Cattle (Bos taurus)
(15)
03a
2zxwJ00
J:1-57
03b
2zxwW00
W:1-57
Topology
:
Cytochrome C Oxidase; Chain K
(22)
Homologous Superfamily
:
Cytochrome C Oxidase, chain K
(22)
Cattle (Bos taurus)
(15)
04a
2zxwK00
K:6-54
04b
2zxwX00
X:6-54
Topology
:
Cytochrome C Oxidase; Chain L
(22)
Homologous Superfamily
:
Cytochrome C Oxidase, chain L
(22)
Cattle (Bos taurus)
(15)
05a
2zxwL00
L:2-47
05b
2zxwY00
Y:2-47
Topology
:
Cytochrome C Oxidase; Chain M
(30)
Homologous Superfamily
:
Cytochrome C Oxidase, chain M
(29)
Cattle (Bos taurus)
(15)
06a
2zxwM00
M:1-43
06b
2zxwZ00
Z:1-43
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.40, no name defined]
(22)
Cattle (Bos taurus)
(15)
07a
2zxwE00
E:6-109
07b
2zxwR00
R:6-109
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
Cytochrome C oxidase subunit h
(22)
Cattle (Bos taurus)
(15)
08a
2zxwH00
H:11-85
08b
2zxwU00
U:11-85
Topology
:
Cytochrome C Oxidase; Chain D
(22)
Homologous Superfamily
:
Cytochrome C Oxidase, chain D
(22)
Cattle (Bos taurus)
(15)
09a
2zxwD00
D:4-147
09b
2zxwQ00
Q:4-147
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
[code=1.10.287.70, no name defined]
(106)
Cattle (Bos taurus)
(15)
10a
2zxwC01
C:3-70
10b
2zxwP01
P:3-70
Homologous Superfamily
:
[code=1.10.287.90, no name defined]
(33)
Cattle (Bos taurus)
(15)
11a
2zxwB01
B:2-91
11b
2zxwO01
O:2-91
Architecture
:
Up-down Bundle
(3216)
Topology
:
Cytochrome C Oxidase; Chain A
(41)
Homologous Superfamily
:
Cytochrome C Oxidase, chain A
(41)
Cattle (Bos taurus)
(15)
12a
2zxwA00
A:2-514
12b
2zxwN00
N:2-514
Topology
:
Four Helix Bundle (Hemerythrin (Met), subunit A)
(300)
Homologous Superfamily
:
[code=1.20.120.80, no name defined]
(26)
Cattle (Bos taurus)
(15)
13a
2zxwC02
C:71-261
13b
2zxwP02
P:71-261
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Cytochrome C Oxidase; Chain F
(22)
Homologous Superfamily
:
Cytochrome C Oxidase, chain F
(22)
Cattle (Bos taurus)
(15)
14a
2zxwF00
F:4-96
14b
2zxwS00
S:4-96
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Cupredoxins - blue copper proteins
(420)
Cattle (Bos taurus)
(16)
15a
2zxwB02
B:92-227
15b
2zxwO02
O:92-227
[
close CATH info
]
Pfam Domains
(14, 28)
Info
all PFAM domains
01a: PFAM_COX6B_2zxwU01 (U:18-82)
01b: PFAM_COX6B_2zxwU02 (U:18-82)
02a: PFAM_COX2_2zxwO01 (O:95-214)
02b: PFAM_COX2_2zxwO02 (O:95-214)
03a: PFAM_COX5B_2zxwS01 (S:4-96)
03b: PFAM_COX5B_2zxwS02 (S:4-96)
04a: PFAM_COX1_2zxwN01 (N:12-461)
04b: PFAM_COX1_2zxwN02 (N:12-461)
05a: PFAM_COX2_TM_2zxwO03 (O:1-83)
05b: PFAM_COX2_TM_2zxwO04 (O:1-83)
06a: PFAM_COX3_2zxwP01 (P:6-261)
06b: PFAM_COX3_2zxwP02 (P:6-261)
07a: PFAM_COX4_2zxwQ01 (Q:4-146)
07b: PFAM_COX4_2zxwQ02 (Q:4-146)
08a: PFAM_COX5A_2zxwR01 (R:6-108)
08b: PFAM_COX5A_2zxwR02 (R:6-108)
09a: PFAM_COX6A_2zxwT01 (T:1-79)
09b: PFAM_COX6A_2zxwT02 (T:1-79)
10a: PFAM_COX6C_2zxwV01 (V:3-73)
10b: PFAM_COX6C_2zxwV02 (V:3-73)
11a: PFAM_COX7B_2zxwX01 (X:6-54)
11b: PFAM_COX7B_2zxwX02 (X:6-54)
12a: PFAM_COX7C_2zxwY01 (Y:2-47)
12b: PFAM_COX7C_2zxwY02 (Y:2-47)
13a: PFAM_COX7a_2zxwW01 (W:2-57)
13b: PFAM_COX7a_2zxwW02 (W:2-57)
14a: PFAM_COX8_2zxwZ01 (Z:1-43)
14b: PFAM_COX8_2zxwZ02 (Z:1-43)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
CHCH
(11)
Family
:
COX6B
(9)
Bos taurus (Bovine)
(9)
01a
COX6B-2zxwU01
U:18-82
01b
COX6B-2zxwU02
U:18-82
Clan
:
CU_oxidase
(192)
Family
:
COX2
(19)
Bos taurus (Bovine)
(9)
02a
COX2-2zxwO01
O:95-214
02b
COX2-2zxwO02
O:95-214
Clan
:
Rubredoxin
(46)
Family
:
COX5B
(10)
Bos taurus (Bovine)
(9)
03a
COX5B-2zxwS01
S:4-96
03b
COX5B-2zxwS02
S:4-96
Clan
:
no clan defined [family: COX1]
(19)
Family
:
COX1
(19)
Bos taurus (Bovine)
(9)
04a
COX1-2zxwN01
N:12-461
04b
COX1-2zxwN02
N:12-461
Clan
:
no clan defined [family: COX2_TM]
(16)
Family
:
COX2_TM
(16)
Bos taurus (Bovine)
(9)
05a
COX2_TM-2zxwO03
O:1-83
05b
COX2_TM-2zxwO04
O:1-83
Clan
:
no clan defined [family: COX3]
(12)
Family
:
COX3
(12)
Bos taurus (Bovine)
(9)
06a
COX3-2zxwP01
P:6-261
06b
COX3-2zxwP02
P:6-261
Clan
:
no clan defined [family: COX4]
(9)
Family
:
COX4
(9)
Bos taurus (Bovine)
(9)
07a
COX4-2zxwQ01
Q:4-146
07b
COX4-2zxwQ02
Q:4-146
Clan
:
no clan defined [family: COX5A]
(9)
Family
:
COX5A
(9)
Bos taurus (Bovine)
(9)
08a
COX5A-2zxwR01
R:6-108
08b
COX5A-2zxwR02
R:6-108
Clan
:
no clan defined [family: COX6A]
(9)
Family
:
COX6A
(9)
Bos taurus (Bovine)
(9)
09a
COX6A-2zxwT01
T:1-79
09b
COX6A-2zxwT02
T:1-79
Clan
:
no clan defined [family: COX6C]
(9)
Family
:
COX6C
(9)
Bos taurus (Bovine)
(9)
10a
COX6C-2zxwV01
V:3-73
10b
COX6C-2zxwV02
V:3-73
Clan
:
no clan defined [family: COX7B]
(9)
Family
:
COX7B
(9)
Bos taurus (Bovine)
(9)
11a
COX7B-2zxwX01
X:6-54
11b
COX7B-2zxwX02
X:6-54
Clan
:
no clan defined [family: COX7C]
(9)
Family
:
COX7C
(9)
Bos taurus (Bovine)
(9)
12a
COX7C-2zxwY01
Y:2-47
12b
COX7C-2zxwY02
Y:2-47
Clan
:
no clan defined [family: COX7a]
(9)
Family
:
COX7a
(9)
Bos taurus (Bovine)
(9)
13a
COX7a-2zxwW01
W:2-57
13b
COX7a-2zxwW02
W:2-57
Clan
:
no clan defined [family: COX8]
(9)
Family
:
COX8
(9)
Bos taurus (Bovine)
(9)
14a
COX8-2zxwZ01
Z:1-43
14b
COX8-2zxwZ02
Z:1-43
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