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(-) Description

Title :  BOVINE HEART CYTOCHROME C OXIDASE IN THE FULLY OXIDIZED STATE AT 1.5 ANGSTROM RESOLUTION
 
Authors :  N. Yano, K. Muramoto, A. Shimada, S. Takemura, J. Baba, H. Fujisawa, M. M K. Shinzawa-Itoh, E. Yamashita, T. Tsukihara, S. Yoshikawa
Date :  01 Dec 15  (Deposition) - 14 Sep 16  (Release) - 23 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M  (1x)
Biol. Unit 2:  N,O,P,Q,R,S,T,U,V,W,X,Y,Z  (1x)
Keywords :  Oxidoreductase, Proton Pump, Heme, Respiratory Chain (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Yano, K. Muramoto, A. Shimada, S. Takemura, J. Baba, H. Fujisawa, M. Mochizuki, K. Shinzawa-Itoh, E. Yamashita, T. Tsukihara, S. Yoshikawa
The Mg2+-Containing Water Cluster Of Mammalian Cytochrome C Oxidase Collects Four Pumping Proton Equivalents In Each Catalytic Cycle.
J. Biol. Chem. V. 291 23882 2016
PubMed-ID: 27605664  |  Reference-DOI: 10.1074/JBC.M115.711770

(-) Compounds

Molecule 1 - CYTOCHROME C OXIDASE SUBUNIT 1
    ChainsA, N
    EC Number1.9.3.1
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE I
 
Molecule 2 - CYTOCHROME C OXIDASE SUBUNIT 2
    ChainsB, O
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE II
 
Molecule 3 - CYTOCHROME C OXIDASE SUBUNIT 3
    ChainsC, P
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE III
 
Molecule 4 - CYTOCHROME C OXIDASE SUBUNIT 4 ISOFORM 1, MITOCHONDRIAL
    ChainsD, Q
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE IV,CYTOCHROME C OXIDASE SUBUNIT IV ISOFORM 1,COX IV-1
 
Molecule 5 - CYTOCHROME C OXIDASE SUBUNIT 5A, MITOCHONDRIAL
    ChainsE, R
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VA
 
Molecule 6 - CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL
    ChainsF, S
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIA,CYTOCHROME C OXIDASE POLYPEPTIDE VB
 
Molecule 7 - CYTOCHROME C OXIDASE SUBUNIT 6A2, MITOCHONDRIAL
    ChainsG, T
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIA-HEART,COXVIAH, CYTOCHROME C OXIDASE POLYPEPTIDE VIB
 
Molecule 8 - CYTOCHROME C OXIDASE SUBUNIT 6B1
    ChainsH, U
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VII,CYTOCHROME C OXIDASE SUBUNIT AED,CYTOCHROME C OXIDASE SUBUNIT VIB ISOFORM 1,COX VIB-1
 
Molecule 9 - CYTOCHROME C OXIDASE SUBUNIT 6C
    ChainsI, V
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIC,CYTOCHROME C OXIDASE SUBUNIT STA
 
Molecule 10 - CYTOCHROME C OXIDASE SUBUNIT 7A1, MITOCHONDRIAL
    ChainsJ, W
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE SUBUNIT VIIIC,VIIIC,CYTOCHROME C OXIDASE SUBUNIT VIIA-HEART,CYTOCHROME C OXIDASE SUBUNIT VIIA-H, CYTOCHROME C OXIDASE SUBUNIT VIIA-MUSCLE,CYTOCHROME C OXIDASE SUBUNIT VIIA-M
 
Molecule 11 - CYTOCHROME C OXIDASE SUBUNIT 7B, MITOCHONDRIAL
    ChainsK, X
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIIB,IHQ
 
Molecule 12 - CYTOCHROME C OXIDASE SUBUNIT 7C, MITOCHONDRIAL
    ChainsL, Y
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIIIA,CYTOCHROME C OXIDASE POLYPEPTIDE VIIC
 
Molecule 13 - CYTOCHROME C OXIDASE SUBUNIT 8B, MITOCHONDRIAL
    ChainsM, Z
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIII-HEART,CYTOCHROME C OXIDASE SUBUNIT 8-1,CYTOCHROME C OXIDASE SUBUNIT 8H,IX,VIIIB

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223242526
Asymmetric Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ
Biological Unit 1 (1x)ABCDEFGHIJKLM             
Biological Unit 2 (1x)             NOPQRSTUVWXYZ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (18, 64)

Asymmetric Unit (18, 64)
No.NameCountTypeFull Name
1CDL4Ligand/IonCARDIOLIPIN
2CHD8Ligand/IonCHOLIC ACID
3CU2Ligand/IonCOPPER (II) ION
4CUA2Ligand/IonDINUCLEAR COPPER ION
5DMU4Ligand/IonDECYL-BETA-D-MALTOPYRANOSIDE
6FME4Mod. Amino AcidN-FORMYLMETHIONINE
7HEA4Ligand/IonHEME-A
8MG2Ligand/IonMAGNESIUM ION
9NA2Ligand/IonSODIUM ION
10PEK6Ligand/Ion(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
11PER2Ligand/IonPEROXIDE ION
12PGV8Ligand/Ion(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
13PSC2Ligand/Ion(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
14SAC2Mod. Amino AcidN-ACETYL-SERINE
15TGL6Ligand/IonTRISTEAROYLGLYCEROL
16TPO2Mod. Amino AcidPHOSPHOTHREONINE
17UNX2Ligand/IonUNKNOWN ATOM OR ION
18ZN2Ligand/IonZINC ION
Biological Unit 1 (14, 28)
No.NameCountTypeFull Name
1CDL2Ligand/IonCARDIOLIPIN
2CHD4Ligand/IonCHOLIC ACID
3CU-1Ligand/IonCOPPER (II) ION
4CUA1Ligand/IonDINUCLEAR COPPER ION
5DMU2Ligand/IonDECYL-BETA-D-MALTOPYRANOSIDE
6FME2Mod. Amino AcidN-FORMYLMETHIONINE
7HEA2Ligand/IonHEME-A
8MG-1Ligand/IonMAGNESIUM ION
9NA-1Ligand/IonSODIUM ION
10PEK3Ligand/Ion(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
11PER1Ligand/IonPEROXIDE ION
12PGV4Ligand/Ion(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
13PSC1Ligand/Ion(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
14SAC1Mod. Amino AcidN-ACETYL-SERINE
15TGL3Ligand/IonTRISTEAROYLGLYCEROL
16TPO1Mod. Amino AcidPHOSPHOTHREONINE
17UNX1Ligand/IonUNKNOWN ATOM OR ION
18ZN-1Ligand/IonZINC ION
Biological Unit 2 (14, 28)
No.NameCountTypeFull Name
1CDL2Ligand/IonCARDIOLIPIN
2CHD4Ligand/IonCHOLIC ACID
3CU-1Ligand/IonCOPPER (II) ION
4CUA1Ligand/IonDINUCLEAR COPPER ION
5DMU2Ligand/IonDECYL-BETA-D-MALTOPYRANOSIDE
6FME2Mod. Amino AcidN-FORMYLMETHIONINE
7HEA2Ligand/IonHEME-A
8MG-1Ligand/IonMAGNESIUM ION
9NA-1Ligand/IonSODIUM ION
10PEK3Ligand/Ion(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
11PER1Ligand/IonPEROXIDE ION
12PGV4Ligand/Ion(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
13PSC1Ligand/Ion(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
14SAC1Mod. Amino AcidN-ACETYL-SERINE
15TGL3Ligand/IonTRISTEAROYLGLYCEROL
16TPO1Mod. Amino AcidPHOSPHOTHREONINE
17UNX1Ligand/IonUNKNOWN ATOM OR ION
18ZN-1Ligand/IonZINC ION

(-) Sites  (55, 55)

Asymmetric Unit (55, 55)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREMET A:28 , THR A:31 , SER A:34 , ILE A:37 , ARG A:38 , TYR A:54 , VAL A:58 , HIS A:61 , ALA A:62 , MET A:65 , VAL A:70 , GLY A:125 , TRP A:126 , TYR A:371 , PHE A:377 , HIS A:378 , SER A:382 , PHE A:393 , MET A:417 , PHE A:425 , GLN A:428 , ARG A:438 , ARG A:439 , SER A:458 , MET A:468 , HOH A:729 , HOH A:731 , HOH A:784binding site for residue HEA A 601
02AC2SOFTWARETRP A:126 , TRP A:236 , VAL A:243 , TYR A:244 , HIS A:290 , HIS A:291 , THR A:309 , ILE A:312 , THR A:316 , GLY A:317 , GLY A:352 , LEU A:353 , GLY A:355 , ILE A:356 , LEU A:358 , ALA A:359 , ASP A:364 , HIS A:368 , VAL A:373 , HIS A:376 , PHE A:377 , VAL A:380 , LEU A:381 , ARG A:438 , PER A:606 , HOH A:721 , HOH A:741 , HOH A:817 , HOH A:831 , ILE B:34binding site for residue HEA A 602
03AC3SOFTWAREHIS A:240 , HIS A:290 , HIS A:291 , PER A:606binding site for residue CU A 603
04AC4SOFTWAREHIS A:368 , ASP A:369 , GLU B:198 , HOH B:447 , HOH B:486 , HOH B:521binding site for residue MG A 604
05AC5SOFTWAREGLU A:40 , GLY A:45 , SER A:441 , HOH A:877binding site for residue NA A 605
06AC6SOFTWAREHIS A:240 , VAL A:243 , HIS A:291 , HEA A:602 , CU A:603binding site for residue PER A 606
07AC7SOFTWAREPHE A:94 , PRO A:95 , ARG A:96 , MET A:97 , HOH A:767 , HIS C:9 , GLY C:20 , ASN C:50 , MET C:54 , TRP C:57 , TRP C:58 , GLU C:64 , HIS C:71 , GLY C:82 , HOH C:489 , PEK G:101binding site for residue PGV A 607
08AC8SOFTWAREASN A:406 , THR A:408 , HOH A:702 , HOH A:785 , HOH A:830 , HOH A:881 , HOH A:886 , HOH A:930 , PHE D:87 , HIS K:10 , GLN M:15 , LEU M:19 , SER M:20 , HOH M:225binding site for residue PGV A 608
09AC9SOFTWAREASN A:422 , PHE A:430 , LEU A:433 , LEU B:7 , LEU B:28 , VAL B:31 , PHE B:32 , SER B:35 , SER B:36 , HOH B:589 , HOH I:173binding site for residue TGL B 301
10AD1SOFTWAREHIS B:161 , CYS B:196 , GLU B:198 , CYS B:200 , HIS B:204 , MET B:207binding site for residue CUA B 302
11AD2SOFTWAREMET A:271 , TRP A:275 , GLN B:59 , GLU B:62 , THR B:63 , HOH B:419 , HOH B:444 , HOH B:468 , PEK P:308 , ARG T:14 , ARG T:17 , GLY T:22binding site for residue CHD B 303
12AD3SOFTWAREPHE A:321 , HIS B:52 , THR B:55 , MET B:56 , ASP B:57 , GLU B:60 , HOH B:405 , HOH B:538 , GLU E:6 , ASP E:8 , PHE E:11 , HOH E:275 , HOH E:280 , ARG I:10 , LEU I:17binding site for residue PSC B 304
13AD4SOFTWAREMET C:51 , MET C:54 , TRP C:58 , VAL C:61 , SER C:65 , THR C:66 , HIS C:71 , ILE C:210 , PHE C:214 , ARG C:221 , HIS C:226 , PHE C:227 , THR C:228 , HIS C:231 , HIS C:232 , PHE C:233 , GLY C:234 , CDL C:303 , HOH C:426 , HOH C:439 , HOH C:446 , HOH C:510binding site for residue PGV C 302
14AD5SOFTWARETHR C:48 , MET C:51 , TYR C:55 , TRP C:58 , ARG C:59 , ILE C:62 , ARG C:63 , PHE C:67 , THR C:174 , THR C:213 , VAL C:217 , PHE C:220 , LYS C:224 , HIS C:226 , PGV C:302 , HOH C:412 , LYS J:8 , LEU J:31binding site for residue CDL C 303
15AD6SOFTWAREARG C:156 , GLN C:161 , PHE C:164 , PHE C:219 , LEU C:223 , HOH C:461 , PHE J:1binding site for residue CHD C 304
16AD7SOFTWAREHIS A:233 , ASP A:300 , THR A:301 , TYR A:304 , HOH A:723 , TRP C:99 , HIS C:103 , HOH C:415 , HOH C:418 , HOH C:432 , HOH C:506 , HOH C:508 , HOH C:520 , LEU P:127binding site for residue CHD C 305
17AD8SOFTWARELYS C:157 , HIS C:158 , GLN C:161 , TYR C:172 , HOH C:425 , HOH C:481 , ALA F:1 , ARG G:17 , PHE G:21 , GLY G:22 , CDL G:102 , SER N:279 , ILE N:311 , GLN O:59 , CHD O:302binding site for residue PEK C 306
18AD9SOFTWAREHOH A:836 , TRP C:99 , TYR C:102 , HIS C:103 , ALA C:107 , HOH C:460 , HOH C:476 , HOH C:514 , HOH C:558 , ASN H:24 , HOH H:120binding site for residue PGV C 307
19AE1SOFTWARETRP A:334 , PHE A:414 , PHE A:418 , HOH A:964 , ILE B:42 , LYS B:49 , HOH B:566 , HOH B:576 , ARG D:73 , THR D:75 , GLU D:77 , TRP D:78 , HOH D:419 , HOH D:452 , ARG I:16 , HIS I:20binding site for residue TGL D 201
20AE2SOFTWARECYS F:60 , CYS F:62 , CYS F:82 , CYS F:85binding site for residue ZN F 101
21AE3SOFTWAREHIS A:151 , VAL A:155 , ILE A:158 , PGV A:607 , TRP C:34 , TYR C:181 , TYR C:182 , ALA C:184 , PHE C:186 , THR C:187 , ILE C:188 , PHE C:198 , GLY C:202 , PHE C:203 , TRP G:62 , THR G:68 , PHE G:69 , PHE G:70 , HIS G:71 , ASN G:76 , HOH G:239binding site for residue PEK G 101
22AE4SOFTWARELEU C:127 , LEU C:131 , TYR C:253 , VAL C:254 , TRP C:258 , PEK C:306 , SER G:27 , LEU G:30 , CYS G:31 , ASN G:34 , LEU G:37 , HIS G:38 , PEK G:103 , HOH G:205 , HOH G:209 , HOH G:258 , HOH G:267 , PHE N:282 , ILE N:286 , SER N:307 , ILE N:311 , ILE O:74 , ALA O:77 , LEU O:78 , HOH O:488binding site for residue CDL G 102
23AE5SOFTWARESER G:2 , ALA G:3 , LYS G:5 , GLY G:6 , HIS G:8 , CDL G:102 , LYS P:77 , ARG P:80 , TYR P:81 , THR P:95 , PHE P:98 , TRP P:240 , VAL P:247binding site for residue PEK G 103
24AE6SOFTWARELEU C:25 , MET C:33 , PHE C:37 , SER J:46 , TYR J:48 , CYS J:49 , LEU J:50 , TRP J:52 , HOH J:204binding site for residue DMU J 101
25AE7SOFTWARETYR J:32 , ARG J:33 , MET J:36 , THR J:37 , LEU J:40binding site for residue CHD J 102
26AE8SOFTWARETHR A:17 , LEU A:21 , PHE A:22 , TRP A:25 , LEU A:113 , PHE A:393 , PHE A:400 , ILE L:11 , PRO L:12 , PHE L:13 , SER L:14 , ARG L:20 , PHE L:29 , SER L:31binding site for residue TGL L 101
27AE9SOFTWARETRP D:98 , LEU M:27 , LEU M:28 , GLY M:31 , TRP M:32 , TYR M:35 , HIS M:36 , HOH M:210binding site for residue DMU M 101
28AF1SOFTWAREALA N:24 , MET N:28 , THR N:31 , SER N:34 , ILE N:37 , ARG N:38 , TYR N:54 , VAL N:58 , HIS N:61 , ALA N:62 , MET N:65 , VAL N:70 , GLY N:125 , TRP N:126 , TYR N:371 , PHE N:377 , HIS N:378 , SER N:382 , VAL N:386 , MET N:417 , PHE N:425 , GLN N:428 , ARG N:438 , ARG N:439 , HOH N:718 , HOH N:739 , HOH N:776binding site for residue HEA N 601
29AF2SOFTWARETRP N:126 , TRP N:236 , VAL N:243 , TYR N:244 , HIS N:290 , HIS N:291 , THR N:309 , ILE N:312 , THR N:316 , GLY N:317 , GLY N:352 , LEU N:353 , GLY N:355 , ILE N:356 , LEU N:358 , ALA N:359 , ASP N:364 , HIS N:368 , VAL N:373 , HIS N:376 , PHE N:377 , VAL N:380 , LEU N:381 , ARG N:438 , PER N:606 , HOH N:706 , HOH N:747 , HOH N:771 , HOH N:787binding site for residue HEA N 602
30AF3SOFTWAREHIS N:240 , HIS N:290 , HIS N:291 , PER N:606binding site for residue CU N 603
31AF4SOFTWAREHIS N:368 , ASP N:369 , GLU O:198 , HOH O:439 , HOH O:479 , HOH O:548binding site for residue MG N 604
32AF5SOFTWAREGLU N:40 , GLY N:45 , SER N:441 , HOH N:835binding site for residue NA N 605
33AF6SOFTWAREHIS N:240 , VAL N:243 , HIS N:291 , HEA N:602 , CU N:603binding site for residue PER N 606
34AF7SOFTWAREPHE N:94 , PRO N:95 , ARG N:96 , MET N:97 , HOH N:728 , HIS P:9 , GLY P:20 , ASN P:50 , MET P:54 , TRP P:57 , TRP P:58 , GLU P:64 , HIS P:71 , GLY P:82 , SER P:89 , HOH P:486 , PEK T:101binding site for residue PGV N 607
35AF8SOFTWAREASN N:422 , PHE N:426 , PHE N:430 , LEU N:433 , HOH N:866 , LEU O:7 , LEU O:28 , PHE O:32 , SER O:35 , ARG V:43binding site for residue TGL N 608
36AF9SOFTWAREHIS O:161 , CYS O:196 , GLU O:198 , CYS O:200 , HIS O:204 , MET O:207binding site for residue CUA O 301
37AG1SOFTWAREPEK C:306 , ARG G:14 , ARG G:17 , GLY G:22 , MET N:271 , GLU O:62 , THR O:63 , HOH O:425 , HOH O:431 , HOH O:451 , HOH O:459 , HOH O:471binding site for residue CHD O 302
38AG2SOFTWAREPHE N:321 , HIS N:328 , MET O:56 , ASP O:57 , GLU O:60 , TRP O:65 , HOH O:532 , GLU R:6 , ASP R:8 , ARG V:10 , HOH V:170binding site for residue PSC O 303
39AG3SOFTWAREALA G:1 , PHE N:237 , ASP N:298 , TRP P:99 , HIS P:103 , ALA P:107 , CHD P:307 , HOH P:403 , HOH P:412 , HOH P:523 , ASN U:24 , HOH U:135binding site for residue PGV P 301
40AG4SOFTWAREVAL P:61 , SER P:65 , THR P:66 , ILE P:210 , PHE P:214 , ARG P:221 , HIS P:226 , PHE P:227 , THR P:228 , HIS P:231 , PHE P:233 , GLY P:234 , CDL P:304 , HOH P:427 , HOH P:444 , HOH P:448 , HOH P:509binding site for residue PGV P 303
41AG5SOFTWARETHR P:48 , MET P:51 , MET P:54 , TYR P:55 , ARG P:59 , ILE P:62 , ARG P:63 , PHE P:67 , PHE P:220 , LYS P:224 , HIS P:226 , PGV P:303 , HOH P:408 , HOH P:502 , HOH P:515binding site for residue CDL P 304
42AG6SOFTWAREARG P:156 , LEU P:160 , GLN P:161 , PHE P:164 , PHE P:219 , LEU P:223 , HOH P:510 , HOH P:571 , PHE W:1binding site for residue CHD P 305
43AG7SOFTWARELEU N:110 , MET P:33 , PHE P:37 , HOH P:404 , SER W:46 , TYR W:48 , CYS W:49 , TRP W:52binding site for residue DMU P 306
44AG8SOFTWAREHIS N:233 , ASP N:300 , THR N:301 , TYR N:304 , HOH N:741 , HOH N:913 , TRP P:99 , HIS P:103 , PGV P:301 , HOH P:442 , HOH P:447 , HOH P:513 , HOH P:523binding site for residue CHD P 307
45AG9SOFTWARESER A:279 , ILE A:311 , THR B:66 , CHD B:303 , LYS P:157 , HIS P:158 , GLN P:161 , THR P:168 , TYR P:172 , HOH P:436 , HOH P:441 , HOH P:476 , ALA S:1 , ARG T:17 , PHE T:21 , GLY T:22 , CDL T:103binding site for residue PEK P 308
46AH1SOFTWAREASN N:406 , THR N:408 , TRP N:409 , ILE N:412 , PHE Q:87 , HOH Q:406 , HIS X:10 , HOH X:116 , GLN Z:15 , LEU Z:19 , SER Z:20binding site for residue PGV Q 201
47AH2SOFTWARETRP N:334 , PHE N:414 , HOH N:707 , ILE O:42 , THR O:47 , HOH O:571 , ARG Q:73 , THR Q:75 , GLU Q:77 , TRP Q:78 , ARG V:16 , HIS V:20binding site for residue TGL Q 202
48AH3SOFTWARECYS S:60 , CYS S:62 , CYS S:82 , CYS S:85binding site for residue ZN S 101
49AH4SOFTWAREHIS N:151 , ALA N:203 , PGV N:607 , TRP P:34 , TYR P:181 , TYR P:182 , ALA P:184 , PHE P:186 , THR P:187 , ILE P:188 , PHE P:198 , GLY P:205 , TRP T:62 , THR T:68 , PHE T:69 , PHE T:70 , HIS T:71 , ASN T:76 , HOH T:237binding site for residue PEK T 101
50AH5SOFTWARELYS C:77 , ARG C:80 , TYR C:81 , PHE C:98 , TRP C:240 , VAL C:247 , SER T:2 , ALA T:3 , LYS T:5 , GLY T:6 , CDL T:103binding site for residue PEK T 102
51AH6SOFTWAREILE A:286 , ASP A:300 , SER A:307 , ILE A:311 , HOH A:730 , ALA B:70 , ALA B:77 , TYR B:85 , HOH B:476 , LEU P:127 , LEU P:131 , SER P:135 , LEU P:138 , PEK P:308 , SER T:27 , LEU T:30 , CYS T:31 , ASN T:34 , LEU T:37 , HIS T:38 , PEK T:102 , HOH T:210 , HOH T:244binding site for residue CDL T 103
52AH7SOFTWAREPHE N:8 , TYR W:32 , ARG W:33 , THR W:37binding site for residue CHD W 101
53AH8SOFTWARETHR N:17 , LEU N:18 , PHE N:22 , TRP N:25 , LEU N:113 , PHE N:400 , PRO Y:12 , PHE Y:13 , SER Y:14 , ARG Y:20 , MET Y:24 , PHE Y:28 , PHE Y:29 , SER Y:31 , HOH Y:221 , HOH Y:225binding site for residue TGL Y 101
54AH9SOFTWARETRP Q:98 , LEU Z:28 , GLY Z:31 , TRP Z:32 , TYR Z:35 , HIS Z:36 , HOH Z:206 , HOH Z:225binding site for residue DMU Z 101
55AI1SOFTWARETRP N:236 , PHE N:238 , GLY N:239 , PRO N:241 , GLU N:242 , VAL N:243 , ILE N:245 , LEU N:246 , ILE N:247 , LEU N:248 , ILE N:280 , GLY N:284 , VAL N:287 , HIS N:290 , ILE N:312 , HEA N:602 , CU N:603 , PER N:606binding site for Di-peptide HIS N 240 and TYR N 244

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1H:29 -H:64
2H:39 -H:53
3U:29 -U:64
4U:39 -U:53

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Pro A:130 -Pro A:131
2Cys A:498 -Pro A:499
3Gln B:103 -Trp B:104
4Trp C:116 -Pro C:117
5Pro N:130 -Pro N:131
6Cys N:498 -Pro N:499
7Gln O:103 -Trp O:104
8Trp P:116 -Pro P:117

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5B1A)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5B1A)

(-) Exons   (0, 0)

(no "Exon" information available for 5B1A)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:514
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhh..............ee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1a A   1 mFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510    
                            |                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                            1-FME                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             

Chain B from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeee.....eeeee...hhhhh.............eeee....eeeeeee....eeeeehhhheeeee.....eeeee.....eeeeee.......hhhh.eeeeeeehhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1a B   1 mAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       
                            1-FME                                                                                                                                                                                                                              

Chain C from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1a C   3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252         

Chain D from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhh......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.......hhh.ee....ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5b1a D   4 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 147
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143    

Chain E from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...hhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5b1a E   5 HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 109
                                    14        24        34        44        54        64        74        84        94       104     

Chain F from PDB  Type:PROTEIN  Length:98
                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhh....................eeeee...eeeeee.........eeeeee....ee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                 5b1a F   1 ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQLAH  98
                                    10        20        30        40        50        60        70        80        90        

Chain G from PDB  Type:PROTEIN  Length:84
                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhhhhhhhh................................................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
                 5b1a G   1 ASAAKGDHGGtGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK  84
                                    10|       20        30        40        50        60        70        80    
                                     11-TPO                                                                     

Chain H from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5b1a H   7 KIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI  85
                                    16        26        36        46        56        66        76         

Chain I from PDB  Type:PROTEIN  Length:73
                                                                                                         
               SCOP domains ------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                 5b1a I   1 sTALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK  73
                            |       10        20        30        40        50        60        70   
                            1-SAC                                                                    

Chain J from PDB  Type:PROTEIN  Length:58
                                                                                          
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------- Transcript
                 5b1a J   1 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPHK  58
                                    10        20        30        40        50        

Chain K from PDB  Type:PROTEIN  Length:49
                                                                                 
               SCOP domains ------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------- Transcript
                 5b1a K   6 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR  54
                                    15        25        35        45         

Chain L from PDB  Type:PROTEIN  Length:46
                                                                              
               SCOP domains ---------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------- PROSITE
                 Transcript ---------------------------------------------- Transcript
                 5b1a L   2 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK  47
                                    11        21        31        41      

Chain M from PDB  Type:PROTEIN  Length:43
                                                                           
               SCOP domains ------------------------------------------- SCOP domains
               CATH domains ------------------------------------------- CATH domains
               Pfam domains ------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------- PROSITE
                 Transcript ------------------------------------------- Transcript
                 5b1a M   1 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS  43
                                    10        20        30        40   

Chain N from PDB  Type:PROTEIN  Length:514
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee..hhhhhhhhh..............ee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1a N   1 mFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510    
                            1-FME                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             

Chain O from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeeee..eeeeee.....eeeee...hhhhh.............eeee....eeeeeee....eeeeehhhheeeee.....eeeee.....eeeeee.......hhhh.eeeeeeehhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1a O   1 mAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       
                            1-FME                                                                                                                                                                                                                              

Chain P from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1a P   3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252         

Chain Q from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhh....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.......hhh.ee....ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5b1a Q   4 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 147
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143    

Chain R from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5b1a R   5 HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 109
                                    14        24        34        44        54        64        74        84        94       104     

Chain S from PDB  Type:PROTEIN  Length:98
                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhh....................eeeee...eeeeee.........eeeeee....ee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                 5b1a S   1 ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQLAH  98
                                    10        20        30        40        50        60        70        80        90        

Chain T from PDB  Type:PROTEIN  Length:84
                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhhhhhhhh................................................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
                 5b1a T   1 ASAAKGDHGGtGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK  84
                                    10|       20        30        40        50        60        70        80    
                                     11-TPO                                                                     

Chain U from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5b1a U   7 KIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI  85
                                    16        26        36        46        56        66        76         

Chain V from PDB  Type:PROTEIN  Length:73
                                                                                                         
               SCOP domains ------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                 5b1a V   1 sTALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK  73
                            |       10        20        30        40        50        60        70   
                            1-SAC                                                                    

Chain W from PDB  Type:PROTEIN  Length:58
                                                                                          
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------- Transcript
                 5b1a W   1 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPHK  58
                                    10        20        30        40        50        

Chain X from PDB  Type:PROTEIN  Length:49
                                                                                 
               SCOP domains ------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------- Transcript
                 5b1a X   6 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR  54
                                    15        25        35        45         

Chain Y from PDB  Type:PROTEIN  Length:46
                                                                              
               SCOP domains ---------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------- PROSITE
                 Transcript ---------------------------------------------- Transcript
                 5b1a Y   2 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK  47
                                    11        21        31        41      

Chain Z from PDB  Type:PROTEIN  Length:43
                                                                           
               SCOP domains ------------------------------------------- SCOP domains
               CATH domains ------------------------------------------- CATH domains
               Pfam domains ------------------------------------------- Pfam domains
         Sec.struct. author .ee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------- PROSITE
                 Transcript ------------------------------------------- Transcript
                 5b1a Z   1 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS  43
                                    10        20        30        40   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5B1A)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5B1A)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5B1A)

(-) Gene Ontology  (32, 127)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        COX1_BOVIN | P003961occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX2_BOVIN | P685301occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX3_BOVIN | P004151occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5iy5 5luf 5xdq
        COX41_BOVIN | P004231occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX5A_BOVIN | P004261occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX5B_BOVIN | P004281occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX6C_BOVIN | P040381occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX7B_BOVIN | P131831occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX7C_BOVIN | P004301occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        COX8B_BOVIN | P101751occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        CX6A2_BOVIN | P074711occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        CX6B1_BOVIN | P004291occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq
        CX7A1_BOVIN | P074701occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1b 5b3s 5gpn 5iy5 5luf 5xdq

(-) Related Entries Specified in the PDB File

5b1b