Chain A from PDB Type:RNA Length:101
1ipq A 1046 AGGUGCUGCAUGACUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUGGGGAUGACGUCAAGUCAUCAUGgCCCU 1211
1055 1065 1075 1085 1095 1105 1115 || 1190 1200 1210
1117| 1207-OMG
1183
Chain B from PDB Type:RNA Length:20
1ipq B 1623 UUUUUUUUUUUUUUUUUUUU 1642
1632 1642
Chain C from PDB Type:RNA Length:92
1ipq C 1801 GCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAucUGGAAUGCGGUCAAAAGCUGCAUCcUGUGuuCGaUCCACAGAAUUCGCACCA 1892
1810 |1820 |1830 | | 1840 1850 1860 | 1870| | 1880 1890
1810-2MG || 1826-M2G | | | || 1865-5MC|| |
1816-H2U 1832-OMC| || 1870-5MU
1817-H2U 1834-OMG|| 1871-PSU
1837-YG 1874-1MA
1839-PSU
1840-5MC
Chain D from PDB Type:RNA Length:92
1ipq D 1901 GCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAucUGGAAUGCGGUCAAAAGCUGCAUCcUGUGuuCGaUCCACAGAAUUCGCACCA 1992
1910 |1920 |1930 | | 1940 1950 1960 | 1970| | 1980 1990
1910-2MG || 1926-M2G | | | || 1965-5MC|| |
1916-H2U 1932-OMC| || 1970-5MU
1917-H2U 1934-OMG|| 1971-PSU
1937-YG 1974-1MA
1939-PSU
1940-5MC
Chain E from PDB Type:RNA Length:29
1ipq E 4646 CUGCUCCUAGUACGAGAGGACCGGAGUGG 4674
4655 4665
Chain F from PDB Type:PROTEIN Length:405
aligned with EFTU_THEAQ | Q01698 from UniProtKB/Swiss-Prot Length:406
Alignment length:405
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401
EFTU_THEAQ 2 AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..................................................................................................................................................................................................................................................................................................................................................................................................................... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------G_TR_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ipq F 9001 AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 9405
9010 9020 9030 9040 9050 9060 9070 9080 9090 9100 9110 9120 9130 9140 9150 9160 9170 9180 9190 9200 9210 9220 9230 9240 9250 9260 9270 9280 9290 9300 9310 9320 9330 9340 9350 9360 9370 9380 9390 9400
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |