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(-) Description

Title :  STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
 
Authors :  A. Weixlbaumer, F. V. Murphy, A. Dziergowska, A. Malkiewicz, F. A. P. Ve P. F. Agris, V. Ramakrishnan
Date :  01 Mar 07  (Deposition) - 15 May 07  (Release) - 12 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,X,Y
Keywords :  Trna-Binding, Rrna-Binding, Metal-Binding, Zinc-Finger, Translation, Coiled Coil, Paromomycin, Trna, Zinc, Mrna, Cmo5U, Ribosome, Rna- Binding, Modifications, Ribosomal Protein, Ribonucleoprotein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Weixlbaumer, F. V. Murphy, A. Dziergowska, A. Malkiewicz, F. A. P. Vendeix, P. F. Agris, V. Ramakrishnan
Mechanism For Expanding The Decoding Capacity Of Transfer Rnas By Modification Of Uridines
Nat. Struct. Mol. Biol. V. 14 498 2007
PubMed-ID: 17496902  |  Reference-DOI: 10.1038/NSMB1242

(-) Compounds

Molecule 1 - 16S RRNA
    ChainsA
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    Other DetailsCHAIN A (16S RNA) HAS E.COLI NUMBERING, BASED ON A STRUCTURAL ALIGNMENT WITH THE CORRESPONDING E.COLI STRUCTURE IN 2AVY
    StrainHB8
 
Molecule 2 - 30S RIBOSOMAL PROTEIN S2
    ChainsB
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 3 - 30S RIBOSOMAL PROTEIN S3
    ChainsC
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 4 - 30S RIBOSOMAL PROTEIN S4
    ChainsD
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 5 - 30S RIBOSOMAL PROTEIN S5
    ChainsE
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 6 - 30S RIBOSOMAL PROTEIN S6
    ChainsF
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
    SynonymTS9
 
Molecule 7 - 30S RIBOSOMAL PROTEIN S7
    ChainsG
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 8 - 30S RIBOSOMAL PROTEIN S8
    ChainsH
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 9 - 30S RIBOSOMAL PROTEIN S9
    ChainsI
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 10 - 30S RIBOSOMAL PROTEIN S10
    ChainsJ
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 11 - 30S RIBOSOMAL PROTEIN S11
    ChainsK
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 12 - 30S RIBOSOMAL PROTEIN S12
    ChainsL
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 13 - 30S RIBOSOMAL PROTEIN S13
    ChainsM
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 14 - 30S RIBOSOMAL PROTEIN S14
    ChainsN
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 15 - 30S RIBOSOMAL PROTEIN S15
    ChainsO
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 16 - 30S RIBOSOMAL PROTEIN S16
    ChainsP
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 17 - 30S RIBOSOMAL PROTEIN S17
    ChainsQ
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 18 - 30S RIBOSOMAL PROTEIN S18
    ChainsR
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 19 - 30S RIBOSOMAL PROTEIN S19
    ChainsS
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 20 - 30S RIBOSOMAL PROTEIN S20
    ChainsT
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 21 - 30S RIBOSOMAL PROTEIN THX
    ChainsU
    Organism ScientificTHERMUS THERMOPHILUS
    Organism Taxid300852
    StrainHB8
 
Molecule 22 - 5'-R(*GP*UP*UP*AP*AP*AP)-3'
    ChainsX
    EngineeredYES
    SynonymRNA
    SyntheticYES
 
Molecule 23 - 5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3'
    ChainsY
    EngineeredYES
    SynonymRNA
    SyntheticYES

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSTUXY

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 258)

Asymmetric/Biological Unit (6, 258)
No.NameCountTypeFull Name
16MZ1Mod. NucleotideN6-METHYLADENOSINE-5'-MONOPHOSPHATE
2CM01Mod. Nucleotide5-(CARBOXYMETHOXY) URIDINE-5'-MONOPHOSPHATE
3K35Ligand/IonPOTASSIUM ION
4MG218Ligand/IonMAGNESIUM ION
5PAR1Ligand/IonPAROMOMYCIN
6ZN2Ligand/IonZINC ION

(-) Sites  (228, 228)

Asymmetric Unit (228, 228)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREG A:1405 , U A:1406 , C A:1407 , A A:1408 , C A:1409 , C A:1490 , G A:1491 , A A:1492 , A A:1493 , G A:1494 , U A:1495 , K A:1838BINDING SITE FOR RESIDUE PAR Z 1
002AC2SOFTWAREC A:701 , G A:703 , C A:1452BINDING SITE FOR RESIDUE MG Z1001
003AC3SOFTWAREG A:156 , G A:157 , G A:158 , U A:164BINDING SITE FOR RESIDUE MG Z1002
004AC4SOFTWAREG A:77BINDING SITE FOR RESIDUE MG Z1003
005AC5SOFTWAREG A:284 , G A:285BINDING SITE FOR RESIDUE MG Z1004
006AC6SOFTWAREG A:730 , G A:731BINDING SITE FOR RESIDUE MG Z1005
007AC7SOFTWAREG A:1120BINDING SITE FOR RESIDUE MG Z1006
008AC8SOFTWAREU A:516 , G A:517 , C A:519BINDING SITE FOR RESIDUE MG Z1007
009AC9SOFTWAREG A:581 , G A:758BINDING SITE FOR RESIDUE MG Z1010
010BC1SOFTWAREG A:309BINDING SITE FOR RESIDUE MG Z1011
011BC2SOFTWAREG A:592 , G A:593 , G A:594 , C A:645 , U A:646BINDING SITE FOR RESIDUE MG Z1012
012BC3SOFTWAREG A:660 , G A:661BINDING SITE FOR RESIDUE MG Z1013
013BC4SOFTWAREG A:1048 , U A:1049 , ALA N:2BINDING SITE FOR RESIDUE MG Z1014
014BC5SOFTWAREG A:260 , U A:261 , U A:264 , ARG T:83BINDING SITE FOR RESIDUE MG Z1015
015BC6SOFTWAREC A:58 , A A:59 , U A:387 , G A:388BINDING SITE FOR RESIDUE MG Z1016
016BC7SOFTWAREG A:11 , U A:12 , G A:21 , G A:22 , C A:23BINDING SITE FOR RESIDUE MG Z1017
017BC8SOFTWAREK A:1820BINDING SITE FOR RESIDUE MG Z1018
018BC9SOFTWAREA A:665 , G A:666 , G A:667BINDING SITE FOR RESIDUE MG Z1019
019CC1SOFTWAREC A:882 , C A:883BINDING SITE FOR RESIDUE MG Z1020
020CC2SOFTWAREC A:48 , U A:114BINDING SITE FOR RESIDUE MG Z1021
021CC3SOFTWAREG A:1171BINDING SITE FOR RESIDUE MG Z1022
022CC4SOFTWAREG A:584BINDING SITE FOR RESIDUE MG Z1023
023CC5SOFTWAREG A:1432 , G A:1467BINDING SITE FOR RESIDUE MG Z1024
024CC6SOFTWAREC A:726 , G A:727BINDING SITE FOR RESIDUE MG Z1025
025CC7SOFTWAREC A:1515 , G A:1516 , G A:1517BINDING SITE FOR RESIDUE MG Z1026
026CC8SOFTWAREG A:976 , U A:1358 , C A:1359BINDING SITE FOR RESIDUE MG Z1027
027CC9SOFTWAREG A:438 , U A:494BINDING SITE FOR RESIDUE MG Z1030
028DC1SOFTWAREC A:749 , G A:750BINDING SITE FOR RESIDUE MG Z1031
029DC2SOFTWAREG A:685BINDING SITE FOR RESIDUE MG Z1032
030DC3SOFTWAREA A:766 , C A:812BINDING SITE FOR RESIDUE MG Z1034
031DC4SOFTWAREA A:768BINDING SITE FOR RESIDUE MG Z1035
032DC5SOFTWAREG A:773 , G A:774 , G A:803BINDING SITE FOR RESIDUE MG Z1037
033DC6SOFTWAREG A:713 , G A:776 , A A:777BINDING SITE FOR RESIDUE MG Z1038
034DC7SOFTWAREA A:780 , G A:800BINDING SITE FOR RESIDUE MG Z1039
035DC8SOFTWAREG A:575 , G A:576 , C A:578BINDING SITE FOR RESIDUE MG Z1040
036DC9SOFTWAREG A:362BINDING SITE FOR RESIDUE MG Z1042
037EC1SOFTWAREC A:454BINDING SITE FOR RESIDUE MG Z1043
038EC2SOFTWAREC A:458 , G A:460 , C A:470BINDING SITE FOR RESIDUE MG Z1044
039EC3SOFTWAREA A:509 , A A:510BINDING SITE FOR RESIDUE MG Z1045
040EC4SOFTWAREU A:560 , C A:562BINDING SITE FOR RESIDUE MG Z1046
041EC5SOFTWAREU A:14BINDING SITE FOR RESIDUE MG Z1047
042EC6SOFTWAREA A:572BINDING SITE FOR RESIDUE MG Z1048
043EC7SOFTWAREG A:21BINDING SITE FOR RESIDUE MG Z1049
044EC8SOFTWAREC A:47 , C A:48 , U A:49 , G A:115BINDING SITE FOR RESIDUE MG Z1050
045EC9SOFTWAREG A:595 , C A:596 , G A:597 , U A:598BINDING SITE FOR RESIDUE MG Z1051
046FC1SOFTWAREC A:824 , G A:825 , G A:874BINDING SITE FOR RESIDUE MG Z1052
047FC2SOFTWAREG A:858 , G A:869BINDING SITE FOR RESIDUE MG Z1053
048FC3SOFTWAREG A:570 , A A:873BINDING SITE FOR RESIDUE MG Z1054
049FC4SOFTWAREA A:860BINDING SITE FOR RESIDUE MG Z1056
050FC5SOFTWAREU A:636 , G A:637BINDING SITE FOR RESIDUE MG Z1057
051FC6SOFTWAREG A:885 , G A:886 , U A:911 , C A:912BINDING SITE FOR RESIDUE MG Z1058
052FC7SOFTWAREA A:937 , A A:938BINDING SITE FOR RESIDUE MG Z1060
053FC8SOFTWAREC A:934BINDING SITE FOR RESIDUE MG Z1061
054FC9SOFTWAREG A:1370BINDING SITE FOR RESIDUE MG Z1064
055GC1SOFTWAREG A:606 , G A:631BINDING SITE FOR RESIDUE MG Z1068
056GC2SOFTWAREG A:682 , G A:683BINDING SITE FOR RESIDUE MG Z1069
057GC3SOFTWAREG A:588BINDING SITE FOR RESIDUE MG Z1070
058GC4SOFTWAREU A:652 , G A:752BINDING SITE FOR RESIDUE MG Z1071
059GC5SOFTWAREG A:944 , G A:945BINDING SITE FOR RESIDUE MG Z1072
060GC6SOFTWAREU A:1351BINDING SITE FOR RESIDUE MG Z1073
061GC7SOFTWAREA A:964 , U A:1199BINDING SITE FOR RESIDUE MG Z1074
062GC8SOFTWAREC A:979 , C A:980 , U A:981 , G A:1222BINDING SITE FOR RESIDUE MG Z1075
063GC9SOFTWAREC A:980BINDING SITE FOR RESIDUE MG Z1076
064HC1SOFTWAREG A:1030A , G A:1030CBINDING SITE FOR RESIDUE MG Z1077
065HC2SOFTWAREG A:1013BINDING SITE FOR RESIDUE MG Z1078
066HC3SOFTWAREG A:1053 , C A:1054 , G A:1197 , K A:1835BINDING SITE FOR RESIDUE MG Z1079
067HC4SOFTWAREC A:1054 , G A:1197 , G A:1198BINDING SITE FOR RESIDUE MG Z1080
068HC5SOFTWAREG A:1294 , G A:1295BINDING SITE FOR RESIDUE MG Z1081
069HC6SOFTWAREG A:1441 , THR T:35BINDING SITE FOR RESIDUE MG Z1082
070HC7SOFTWAREG A:1461 , G A:1462BINDING SITE FOR RESIDUE MG Z1083
071HC8SOFTWAREG A:1435BINDING SITE FOR RESIDUE MG Z1084
072HC9SOFTWAREG A:1469 , G A:1470BINDING SITE FOR RESIDUE MG Z1085
073IC1SOFTWAREG A:1417 , G A:1482BINDING SITE FOR RESIDUE MG Z1086
074IC2SOFTWAREA A:149BINDING SITE FOR RESIDUE MG Z1088
075IC3SOFTWAREG A:299 , A A:300 , G A:558 , U A:560 , G A:566BINDING SITE FOR RESIDUE MG Z1089
076IC4SOFTWAREG A:324BINDING SITE FOR RESIDUE MG Z1090
077IC5SOFTWAREA A:572 , A A:573 , A A:574BINDING SITE FOR RESIDUE MG Z1091
078IC6SOFTWAREG A:649 , G A:650BINDING SITE FOR RESIDUE MG Z1092
079IC7SOFTWAREA A:608BINDING SITE FOR RESIDUE MG Z1093
080IC8SOFTWAREA A:53 , A A:353BINDING SITE FOR RESIDUE MG Z1095
081IC9SOFTWAREU A:1065 , C A:1066BINDING SITE FOR RESIDUE MG Z1096
082JC1SOFTWAREA A:1110 , C A:1189BINDING SITE FOR RESIDUE MG Z1097
083JC2SOFTWAREA A:865 , C A:866 , G A:1079BINDING SITE FOR RESIDUE MG Z1098
084JC3SOFTWAREA A:1067 , G A:1068 , G A:1094 , G A:1387BINDING SITE FOR RESIDUE MG Z1099
085JC4SOFTWAREU A:1095 , G A:1108BINDING SITE FOR RESIDUE MG Z1100
086JC5SOFTWAREU A:1083 , U A:1086BINDING SITE FOR RESIDUE MG Z1101
087JC6SOFTWAREG A:286BINDING SITE FOR RESIDUE MG Z1102
088JC7SOFTWAREG A:1224BINDING SITE FOR RESIDUE MG Z1103
089JC8SOFTWAREG A:1266 , A A:1268BINDING SITE FOR RESIDUE MG Z1104
090JC9SOFTWAREG A:903 , MG A:1759BINDING SITE FOR RESIDUE MG Z1105
091KC1SOFTWAREG A:963 , A A:964BINDING SITE FOR RESIDUE MG Z1106
092KC2SOFTWAREC A:924 , G A:925 , G A:927 , U A:1390 , U A:1391BINDING SITE FOR RESIDUE MG Z1107
093KC3SOFTWAREG A:1526BINDING SITE FOR RESIDUE MG Z1109
094KC4SOFTWAREU A:420BINDING SITE FOR RESIDUE MG Z1110
095KC5SOFTWAREU A:1498 , A A:1499 , A A:1500 , G A:1504 , G A:1505BINDING SITE FOR RESIDUE MG Z1112
096KC6SOFTWAREA A:101BINDING SITE FOR RESIDUE MG Z1113
097KC7SOFTWAREG A:44 , U A:45 , G A:396BINDING SITE FOR RESIDUE MG Z1114
098KC8SOFTWAREG A:38BINDING SITE FOR RESIDUE MG Z1115
099KC9SOFTWAREG A:138BINDING SITE FOR RESIDUE MG Z1116
100LC1SOFTWAREG A:148 , A A:172BINDING SITE FOR RESIDUE MG Z1117
101LC2SOFTWAREA A:195BINDING SITE FOR RESIDUE MG Z1119
102LC3SOFTWAREG A:181 , U A:182 , G A:183 , MG A:1742BINDING SITE FOR RESIDUE MG Z1120
103LC4SOFTWAREG A:189LBINDING SITE FOR RESIDUE MG Z1121
104LC5SOFTWAREG A:189I , G A:189J , U A:189KBINDING SITE FOR RESIDUE MG Z1122
105LC6SOFTWAREG A:129A , C A:189D , G A:189HBINDING SITE FOR RESIDUE MG Z1123
106LC7SOFTWAREA A:116 , G A:117 , G A:289BINDING SITE FOR RESIDUE MG Z1125
107LC8SOFTWAREG A:351 , C A:352BINDING SITE FOR RESIDUE MG Z1126
108LC9SOFTWAREC A:372 , U A:375 , G A:376 , U A:387BINDING SITE FOR RESIDUE MG Z1127
109MC1SOFTWAREG A:410 , A A:431BINDING SITE FOR RESIDUE MG Z1128
110MC2SOFTWAREC A:504 , G A:505BINDING SITE FOR RESIDUE MG Z1129
111MC3SOFTWAREG A:111 , G A:112BINDING SITE FOR RESIDUE MG Z1130
112MC4SOFTWAREG A:709 , G A:710BINDING SITE FOR RESIDUE MG Z1131
113MC5SOFTWAREA A:782 , A A:794BINDING SITE FOR RESIDUE MG Z1132
114MC6SOFTWAREG A:1058 , C A:1059 , G A:1198 , U A:1199BINDING SITE FOR RESIDUE MG Z1133
115MC7SOFTWAREC A:1303 , G A:1304 , ASP U:5BINDING SITE FOR RESIDUE MG Z1134
116MC8SOFTWAREGLU B:20 , ASP B:166 , ASP B:189 , ASP B:191 , ASP B:205BINDING SITE FOR RESIDUE MG Z1137
117MC9SOFTWARECYS D:9 , CYS D:12 , LEU D:19 , CYS D:26 , CYS D:31BINDING SITE FOR RESIDUE ZN Z1138
118NC1SOFTWARECYS N:24 , CYS N:27 , CYS N:40 , CYS N:43BINDING SITE FOR RESIDUE ZN Z1139
119NC2SOFTWAREG A:46 , C A:366 , U A:367 , G A:394BINDING SITE FOR RESIDUE MG Z1141
120NC3SOFTWAREG A:146 , G A:147 , MG A:1740BINDING SITE FOR RESIDUE MG Z1142
121NC4SOFTWAREG A:145 , G A:146 , MG A:1739BINDING SITE FOR RESIDUE MG Z1143
122NC5SOFTWAREU A:182 , G A:183 , MG A:1720BINDING SITE FOR RESIDUE MG Z1145
123NC6SOFTWAREU A:788 , U A:789 , A A:792BINDING SITE FOR RESIDUE MG Z1146
124NC7SOFTWAREU A:789 , A A:790 , G A:791 , U A:1541BINDING SITE FOR RESIDUE MG Z1147
125NC8SOFTWAREU A:1528 , G A:1529 , G A:1530BINDING SITE FOR RESIDUE MG Z1148
126NC9SOFTWAREC A:518 , G A:530 , PRO L:48 , U X:3BINDING SITE FOR RESIDUE MG Z1149
127OC1SOFTWAREC A:518 , G A:529 , PRO L:48 , ASN L:49BINDING SITE FOR RESIDUE MG Z1150
128OC2SOFTWAREG A:1491 , VAL L:43 , THR L:44BINDING SITE FOR RESIDUE MG Z1151
129OC3SOFTWAREK A:1813BINDING SITE FOR RESIDUE MG Z1152
130OC4SOFTWAREG A:255 , G A:266 , ILE Q:65BINDING SITE FOR RESIDUE MG Z1153
131OC5SOFTWAREC A:817 , G A:818 , C A:1527 , U A:1528BINDING SITE FOR RESIDUE MG Z1154
132OC6SOFTWAREA A:1238BINDING SITE FOR RESIDUE MG Z1155
133OC7SOFTWAREC A:1336BINDING SITE FOR RESIDUE MG Z1156
134OC8SOFTWARELYS G:35 , ASN G:37 , LEU G:38BINDING SITE FOR RESIDUE MG Z1157
135OC9SOFTWAREASN G:37 , GLY I:39 , LEU I:40 , VAL I:41BINDING SITE FOR RESIDUE MG Z1158
136PC1SOFTWAREC A:795 , U A:1506BINDING SITE FOR RESIDUE MG Z1159
137PC2SOFTWAREG A:69 , G A:70 , G A:98 , U A:99BINDING SITE FOR RESIDUE MG Z1160
138PC3SOFTWAREG A:575 , G A:576 , G A:758 , G A:821 , C A:880BINDING SITE FOR RESIDUE MG Z1161
139PC4SOFTWAREC A:58 , A A:59 , C A:386 , U A:387BINDING SITE FOR RESIDUE MG Z1162
140PC5SOFTWAREA A:33 , C A:398BINDING SITE FOR RESIDUE MG Z1163
141PC6SOFTWAREU A:37 , G A:38BINDING SITE FOR RESIDUE MG Z1164
142PC7SOFTWAREU A:12 , U A:13 , C A:526 , G A:527 , A A:914BINDING SITE FOR RESIDUE MG Z1165
143PC8SOFTWAREG A:902 , G A:903 , U A:1512 , MG A:1705BINDING SITE FOR RESIDUE MG Z1166
144PC9SOFTWAREU A:833 , C A:834 , G A:852 , G A:853BINDING SITE FOR RESIDUE MG Z1167
145QC1SOFTWAREU A:561 , LYS L:20BINDING SITE FOR RESIDUE MG Z1168
146QC2SOFTWAREA A:563 , C A:564 , ARG L:15 , TYR Q:32BINDING SITE FOR RESIDUE MG Z1169
147QC3SOFTWAREC A:934 , A A:935 , C A:936BINDING SITE FOR RESIDUE MG Z1170
148QC4SOFTWAREU A:921 , G A:922 , U A:1393BINDING SITE FOR RESIDUE MG Z1171
149QC5SOFTWAREG A:15 , A A:16 , U A:920 , A A:1396BINDING SITE FOR RESIDUE MG Z1172
150QC6SOFTWAREC A:174 , C A:175BINDING SITE FOR RESIDUE MG Z1173
151QC7SOFTWAREC A:970BINDING SITE FOR RESIDUE MG Z1174
152QC8SOFTWAREC A:972BINDING SITE FOR RESIDUE MG Z1175
153QC9SOFTWAREU A:1073 , G A:1074 , G A:1082 , U A:1083BINDING SITE FOR RESIDUE MG Z1176
154RC1SOFTWARETYR S:80 , ARG S:81BINDING SITE FOR RESIDUE MG Z1177
155RC2SOFTWAREC A:121 , G A:124 , U A:125 , G A:126 , C A:235 , G A:236 , C A:237BINDING SITE FOR RESIDUE MG Z1178
156RC3SOFTWAREU A:125 , G A:126BINDING SITE FOR RESIDUE MG Z1179
157RC4SOFTWAREU A:1510 , G A:1511 , U A:1512 , A A:1513 , G A:1523 , C A:1524BINDING SITE FOR RESIDUE MG Z1180
158RC5SOFTWAREA A:1500 , G A:1504 , G A:1505 , A A:1507 , G A:1508BINDING SITE FOR RESIDUE MG Z1181
159RC6SOFTWAREA A:1499 , A A:1500 , G A:1508 , G A:1521BINDING SITE FOR RESIDUE MG Z1182
160RC7SOFTWAREA A:1396 , C A:1397 , A A:1398 , G A:1401 , C A:1402BINDING SITE FOR RESIDUE MG Z1183
161RC8SOFTWAREG A:61 , U A:62 , G A:105BINDING SITE FOR RESIDUE MG Z1184
162RC9SOFTWAREG A:28 , G A:29BINDING SITE FOR RESIDUE MG Z1185
163SC1SOFTWAREC A:280 , SER Q:39BINDING SITE FOR RESIDUE MG Z1186
164SC2SOFTWAREG A:251 , G A:266 , C A:267 , C A:268BINDING SITE FOR RESIDUE MG Z1187
165SC3SOFTWAREASP Q:13 , MET Q:15 , GLU Q:49BINDING SITE FOR RESIDUE MG Z1188
166SC4SOFTWAREG A:317BINDING SITE FOR RESIDUE MG Z1189
167SC5SOFTWAREC A:314 , A A:315 , G A:318BINDING SITE FOR RESIDUE MG Z1190
168SC6SOFTWAREA A:315BINDING SITE FOR RESIDUE MG Z1191
169SC7SOFTWAREA A:329 , G A:332 , G A:333BINDING SITE FOR RESIDUE MG Z1192
170SC8SOFTWAREC A:403 , A A:547 , G A:548BINDING SITE FOR RESIDUE MG Z1193
171SC9SOFTWAREG A:445 , G A:446BINDING SITE FOR RESIDUE MG Z1195
172TC1SOFTWAREG A:450 , A A:451 , A A:452BINDING SITE FOR RESIDUE MG Z1196
173TC2SOFTWAREC A:449 , G A:450 , G A:481BINDING SITE FOR RESIDUE MG Z1197
174TC3SOFTWAREA A:563 , C A:564 , U A:565 , G A:567BINDING SITE FOR RESIDUE MG Z1198
175TC4SOFTWAREG A:604 , U A:605 , G A:633 , C A:634BINDING SITE FOR RESIDUE MG Z1199
176TC5SOFTWAREG A:830 , U A:831 , G A:855 , C A:856BINDING SITE FOR RESIDUE MG Z1200
177TC6SOFTWAREG A:888 , A A:889 , G A:890BINDING SITE FOR RESIDUE MG Z1201
178TC7SOFTWAREA A:1324 , C A:1363BINDING SITE FOR RESIDUE MG Z1202
179TC8SOFTWAREG A:1224 , A A:1225 , C A:1322 , GLN M:101BINDING SITE FOR RESIDUE MG Z1203
180TC9SOFTWAREA A:1319 , C A:1322BINDING SITE FOR RESIDUE MG Z1204
181UC1SOFTWAREU A:1083 , G A:1084 , ARG E:27BINDING SITE FOR RESIDUE MG Z1205
182UC2SOFTWAREU A:1330 , THR M:20 , ILE M:22 , TYR M:23 , ILE M:25BINDING SITE FOR RESIDUE MG Z1206
183UC3SOFTWAREA A:1238 , A A:1299 , C A:1335BINDING SITE FOR RESIDUE MG Z1207
184UC4SOFTWAREU A:1485 , G A:1486BINDING SITE FOR RESIDUE MG Z1208
185UC5SOFTWAREG A:926 , G A:1505 , C A:1543BINDING SITE FOR RESIDUE MG Z1209
186UC6SOFTWAREALA D:82 , SER D:83 , LYS D:85 , GLY D:87 , THR D:89BINDING SITE FOR RESIDUE MG Z1210
187UC7SOFTWAREGLU E:68BINDING SITE FOR RESIDUE MG Z1211
188UC8SOFTWAREARG F:80 , ARG F:82 , VAL F:85BINDING SITE FOR RESIDUE MG Z1212
189UC9SOFTWAREILE E:13BINDING SITE FOR RESIDUE MG Z1213
190VC1SOFTWAREC A:940BINDING SITE FOR RESIDUE MG Z1214
191VC2SOFTWAREG A:876 , THR H:11 , ARG H:14BINDING SITE FOR RESIDUE MG Z1215
192VC3SOFTWAREARG H:14 , HIS H:82 , ILE H:83BINDING SITE FOR RESIDUE MG Z1216
193VC4SOFTWAREU A:1495BINDING SITE FOR RESIDUE MG Z1217
194VC5SOFTWAREG A:1497 , U A:1498BINDING SITE FOR RESIDUE MG Z1218
195VC6SOFTWAREA A:965 , G A:1197 , G A:1198BINDING SITE FOR RESIDUE MG Z1219
196VC7SOFTWAREG A:933 , C A:934BINDING SITE FOR RESIDUE MG Z1220
197VC8SOFTWAREG A:293 , U A:304 , G A:305BINDING SITE FOR RESIDUE K Z1221
198VC9SOFTWAREU A:133 , U A:229 , G A:230BINDING SITE FOR RESIDUE K Z1222
199WC1SOFTWAREU A:863BINDING SITE FOR RESIDUE K Z1223
200WC2SOFTWAREG A:577 , U A:813BINDING SITE FOR RESIDUE K Z1224
201WC3SOFTWAREG A:894 , G A:895BINDING SITE FOR RESIDUE K Z1225
202WC4SOFTWAREC A:291 , U A:304 , G A:305BINDING SITE FOR RESIDUE K Z1226
203WC5SOFTWAREG A:576 , G A:577BINDING SITE FOR RESIDUE K Z1227
204WC6SOFTWAREG A:898BINDING SITE FOR RESIDUE K Z1228
205WC7SOFTWAREG A:257 , G A:258 , G A:266 , MG A:1748BINDING SITE FOR RESIDUE K Z1229
206WC8SOFTWAREU A:512 , U A:534 , A A:535BINDING SITE FOR RESIDUE K Z1230
207WC9SOFTWAREA A:495 , A A:496BINDING SITE FOR RESIDUE K Z1232
208XC1SOFTWAREG A:595BINDING SITE FOR RESIDUE K Z1233
209XC2SOFTWAREG A:191 , U A:192BINDING SITE FOR RESIDUE K Z1235
210XC3SOFTWAREG A:473 , G A:474 , MG A:1618BINDING SITE FOR RESIDUE K Z1236
211XC4SOFTWAREG A:557 , G A:558BINDING SITE FOR RESIDUE K Z1237
212XC5SOFTWAREG A:1185 , G A:1186BINDING SITE FOR RESIDUE K Z1238
213XC6SOFTWAREG A:688 , G A:700BINDING SITE FOR RESIDUE K Z1239
214XC7SOFTWAREG A:247 , GLU Q:96BINDING SITE FOR RESIDUE K Z1240
215XC8SOFTWAREG A:947 , A A:1332 , A A:1333 , THR M:109BINDING SITE FOR RESIDUE K Z1241
216XC9SOFTWAREU A:129 , G A:231 , G A:232BINDING SITE FOR RESIDUE K Z1242
217YC1SOFTWAREC A:1352BINDING SITE FOR RESIDUE K Z1243
218YC2SOFTWAREG A:492BINDING SITE FOR RESIDUE K Z1244
219YC3SOFTWAREG A:226 , G A:227BINDING SITE FOR RESIDUE K Z1245
220YC4SOFTWAREU A:1381BINDING SITE FOR RESIDUE K Z1246
221YC5SOFTWAREG A:928 , G A:929BINDING SITE FOR RESIDUE K Z1247
222YC6SOFTWAREG A:662 , U A:743BINDING SITE FOR RESIDUE K Z1248
223YC7SOFTWAREA A:151 , G A:167 , G A:168BINDING SITE FOR RESIDUE K Z1250
224YC8SOFTWAREC A:1054 , U A:1196 , G A:1197 , MG A:1679BINDING SITE FOR RESIDUE K Z1251
225YC9SOFTWAREGLU E:83BINDING SITE FOR RESIDUE K Z1252
226ZC1SOFTWAREU A:516 , G A:517 , U A:531BINDING SITE FOR RESIDUE K Z1253
227ZC2SOFTWAREG A:724 , G A:725BINDING SITE FOR RESIDUE K Z1254
228ZC3SOFTWAREPAR A:1601BINDING SITE FOR RESIDUE K Z1255

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1D:26 -D:31
2N:40 -N:43

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2UUB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2UUB)

(-) PROSITE Motifs  (21, 21)

Asymmetric/Biological Unit (21, 21)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RIBOSOMAL_S13_2PS50159 Ribosomal protein S13 family profile.RS13_THET84-112  1M:4-112
2S5_DSRBDPS50881 S5 double stranded RNA-binding domain profile.RS5_THET86-69  1E:6-69
3RIBOSOMAL_S2_1PS00962 Ribosomal protein S2 signature 1.RS2_THET87-18  1B:7-18
4RIBOSOMAL_S7PS00052 Ribosomal protein S7 signature.RS7_THET820-46  1G:20-46
5RIBOSOMAL_S14PS00527 Ribosomal protein S14 signature.RS14Z_THEAQ23-45  1N:23-45
RS14Z_THET823-45  1N:23-45
6RIBOSOMAL_S5PS00585 Ribosomal protein S5 signature.RS5_THET823-55  1E:23-55
7RIBOSOMAL_S10PS00361 Ribosomal protein S10 signature.RS10_THET827-42  1J:27-42
8RIBOSOMAL_S18PS00057 Ribosomal protein S18 signature.RS18_THET832-55  1R:32-55
9KH_TYPE_2PS50823 Type-2 KH domain profile.RS3_THET839-107  1C:39-107
10RIBOSOMAL_S15PS00362 Ribosomal protein S15 signature.RS15_THET839-69  1O:39-69
11RIBOSOMAL_S12PS00055 Ribosomal protein S12 signature.RS12_THET843-50  1L:46-53
12RIBOSOMAL_S6PS01048 Ribosomal protein S6 signature.RS6_THET844-53  1F:44-53
13RIBOSOMAL_S19PS00323 Ribosomal protein S19 signature.RS19_THET853-77  1S:53-77
14RIBOSOMAL_S17PS00056 Ribosomal protein S17 signature.RS17_THET854-66  1Q:54-66
RS17_THEAQ54-66  1Q:54-66
15RIBOSOMAL_S9PS00360 Ribosomal protein S9 signature.RS9_THET867-85  1I:67-85
16RIBOSOMAL_S13_1PS00646 Ribosomal protein S13 signature.RS13_THET888-101  1M:88-101
17RIBOSOMAL_S11PS00054 Ribosomal protein S11 signature.RS11_THET895-117  1K:95-117
18RIBOSOMAL_S4PS00632 Ribosomal protein S4 signature.RS4_THET897-121  1D:97-121
19S4PS50889 S4 RNA-binding domain profile.RS4_THET899-161  1D:99-161
20RIBOSOMAL_S8PS00053 Ribosomal protein S8 signature.RS8_THEAQ108-125  1H:108-125
RS8_THET8108-125  1H:108-125
21RIBOSOMAL_S3PS00548 Ribosomal protein S3 signature.RS3_THET8163-197  1C:163-197

(-) Exons   (0, 0)

(no "Exon" information available for 2UUB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:RNA  Length:1512
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               2uub A     5 UGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCCUUUCU  1544
                                    14        24        34        44        54        64        76       |89   ||  101       111       121       130       140       150       160       170       180      189A||||||189K|      198     ||219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439|      450       461|      480       490     ||501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841|      857       867       877       887       897       907       917       927       937       947       957       967       977       987       997    | 1006      1016      1026    ||1032      1042      1052      1062      1072      1082      1092      1102      1112      1122      1132      1142      1152      1162   || 1173      1183      1193      1203      1213      1223      1233      1243      1253      1263      1273      1283      1293      1303      1313      1323      1333      1343      1353      1363|     1372      1382      1392      1402      1412      1422      1432      1442||    1457      1467      1477      1487      1497      1507      1517      1527     |1542  
                                                                                               73|      84|   93|                              129A                                                         189A|||||189J||            204|                                                                                                                                                                                                                            439|              458|||    477|              496|                                                                                                                                                                                                                                                                                                                                                    841|                                                                                                                                                     1001A                         1030A|||                                                                                                                                    1166|                                                                                                                                                                                               1363A                                                                           1442A| 1447||                                                                         1533|     
                                                                                                76       88    96                                                                                            189B|||||189K|             216                                                                                                                                                                                                                             441               460||     479               498                                                                                                                                                                                                                                                                                                                                                     848                                                                                                                                                                                    1030B||                                                                                                                                     1168                                                                                                                                                                                                                                                                                1442B  1452|                                                                          1539     
                                                                                                                                                                                                              189C|||||189L                                                                                                                                                                                                                                                                461|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       1030C|                                                                                                                                                                                                                                                                                                                                                                                                                                 1456                                                                                   
                                                                                                                                                                                                               189D|||||                                                                                                                                                                                                                                                                    470                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        1030D                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
                                                                                                                                                                                                                189E||||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                 189F|||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                  189G||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                   189H|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                    189I                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            

Chain B from PDB  Type:PROTEIN  Length:235
 aligned with RS2_THET8 | P80371 from UniProtKB/Swiss-Prot  Length:256

    Alignment length:235
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236     
          RS2_THET8       7 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQE   241
               SCOP domains d2uubb1 B:7-240 Ribosomal protein S2                                                                                                                                                                                                      - SCOP domains
               CATH domains -----------------2uubB01 B:24-97,B:154-241                                                 --------------------------------------------------------2uubB01 B:24-97,B:154-241 Glucose-6-phosphate isomerase like protein; domain 1           CATH domains
               Pfam domains ---Ribosomal_S2-2uubB01 B:10-226                                                                                                                                                                                            --------------- Pfam domains
         Sec.struct. author ..................hhhhhh.eeeee..eeeehhhhhhhhhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhh....ee..........hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.....eeee.....hhhhhhhhhhh...eeeee....hhhhh.eeee....hhhhhhhhhhhhhhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) RIBOSOMAL_S2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub B     7 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQE   241
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236     

Chain C from PDB  Type:PROTEIN  Length:207
 aligned with RS3_THET8 | P80372 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:207
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       
          RS3_THET8       2 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEVI   208
               SCOP domains d2uubc1 C:2-106 Ribosomal protein S3 N-terminal domain                                                   d2uubc2 C:107-207 Ribosomal protein S3 C-terminal domain                                             - SCOP domains
               CATH domains ---------------2uubC01 C:17-107  [code=3.30.300.20, no name defined]                                      2uubC02 C:108-208  [code=3.30.1140.32, no name defined]                                               CATH domains
               Pfam domains ------------------------------------KH_2-2uubC01 C:38-111                                                     -------Ribosomal_S3_C-2uubC02 C:119-202                                                    ------ Pfam domains
         Sec.struct. author ............................hhhhhhhhhhhhhhhhh.....eeee..ee....ee..eee.hhhhhhh...hhhhhhhhhhhhhh................hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeeeeee.hhhh...eeeeeeee..........eeeeeeeee....eeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (8)
                PROSITE (9) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (9)
               PROSITE (10) -------------------------------------KH_TYPE_2  PDB: C:39-107 UniProt: 39-107                             ----------------------------------------------------------------------------------------------------- PROSITE (10)
                PROSITE (1) -----------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_S3  PDB: C:163-197       ----------- PROSITE (1)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub C     2 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEVI   208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       

Chain D from PDB  Type:PROTEIN  Length:208
 aligned with RS4_THET8 | P80373 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        
          RS4_THET8       2 GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR   209
               SCOP domains d2uubd1 D:2-209 Ribosomal protein S4                                                                                                                                                                             SCOP domains
               CATH domains 2uubD01 D:2-97,D:195-209 Ribosomal Protein S4 Delta 41; Chain A, domain 1                       2uubD02 D:98-194                                                                                 2uubD01         CATH domains
               Pfam domains Ribosomal_S4-2uubD02 D:2-98                                                                      S4-2uubD01 D:99-146                             --------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhh...................................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..eee..ee............eeee.hhhh.hhhhhhhhhhhh.......eeee....eeee....hhhhh....hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -----------------------------------------------------------------------------------------------RIBOSOMAL_S4             ---------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -------------------------------------------------------------------------------------------------S4  PDB: D:99-161 UniProt: 99-161                              ------------------------------------------------ PROSITE (5)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub D     2 GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR   209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        

Chain E from PDB  Type:PROTEIN  Length:151
 aligned with RS5_THET8 | Q5SHQ5 from UniProtKB/Swiss-Prot  Length:162

    Alignment length:151
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154 
          RS5_THET8       5 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKGE   155
               SCOP domains d2uube2 E:5-73 Ribosomal S5 protein, N-terminal domain               d2uube1 E:74-154 Ribosomal protein S5, C-terminal domain                         - SCOP domains
               CATH domains 2uubE01 E:5-68  [code=3.30.160.20, no name defined]             2uubE02 E:69-143  [code=3.30.230.10, no name defined]                      ------------ CATH domains
               Pfam domains Ribosomal_S5-2uubE01 E:5-71                                        --------Ribosomal_S5_C-2uubE02 E:80-153                                           -- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeee..eeeeeeeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhhheee...........eeeee..eeeeeee......ee.hhhhhhhhhhh....eeeeeee..hhhhhhhhhhhhhhhh.hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -S5_DSRBD  PDB: E:6-69 UniProt: 6-69                             -------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ------------------RIBOSOMAL_S5  PDB: E:23-55       ---------------------------------------------------------------------------------------------------- PROSITE (6)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub E     5 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKGE   155
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154 

Chain F from PDB  Type:PROTEIN  Length:101
 aligned with RS6_THET8 | Q5SLP8 from UniProtKB/Swiss-Prot  Length:101

    Alignment length:101
                                    10        20        30        40        50        60        70        80        90       100 
          RS6_THET8       1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQEPFLANA   101
               SCOP domains d2uubf1 F:1-101 Ribosomal protein S6                                                                  SCOP domains
               CATH domains 2uubF00 F:1-101  [code=3.30.70.60, no name defined]                                                   CATH domains
               Pfam domains -Ribosomal_S6-2uubF01 F:2-93                                                                 -------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhhhh.........eeeeeeeee..eeeeeeee...eehhhhhhhhhhhhhh...eeeeeeee......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ----------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ----------------------------------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) -------------------------------------------RIBOSOMAL_------------------------------------------------ PROSITE (8)
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
               2uub F     1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQEPFLANA   101
                                    10        20        30        40        50        60        70        80        90       100 

Chain G from PDB  Type:PROTEIN  Length:155
 aligned with RS7_THET8 | P17291 from UniProtKB/Swiss-Prot  Length:156

    Alignment length:155
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     
          RS7_THET8       2 ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW   156
               SCOP domains d2uubg1 G:2-156 Ribosomal protein S7                                                                                                                        SCOP domains
               CATH domains 2uubG00 G:2-156 Ribosomal Protein S7;                                                                                                                       CATH domains
               Pfam domains Ribosomal_S7-2uubG01 G:2-149                                                                                                                        ------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh..eee..ee....ee..eee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------RIBOSOMAL_S7  PDB: G:20-46 -------------------------------------------------------------------------------------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub G     2 ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW   156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     

Chain H from PDB  Type:PROTEIN  Length:138
 aligned with RS8_THEAQ | A0A0M9AFS9 from UniProtKB/Swiss-Prot  Length:138

    Alignment length:138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        
          RS8_THEAQ       1 MLTDPIADMLTRIRNATRVYKESTEVPASRFKEEILKILAREGFIKGYERVEVDGKPYLRIHLKYGPRRQGPDPRPEQVIKHIRRISRPGRRVYVGVKEIPRVRRGLGIAILSTPKGVLTDREARKLGVGGELICEVW   138
               SCOP domains d2uubh1 H:1-138 Ribosomal protein S8                                                                                                       SCOP domains
               CATH domains --2uubH01 H:3-80  [code=3.30.1370.30, no name defined]                          2uubH02 H:81-138  [code=3.30.1490.10, no name defined]     CATH domains
               Pfam domains ---Ribosomal_S8-2uubH01 H:4-138                                                                                                            Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh....ee....hhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee..................eeee........eehhhhh.hhhhhh.eeeeee..eeeehhhhhhh...eeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) -----------------------------------------------------------------------------------------------------------RIBOSOMAL_S8      ------------- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
               2uub H     1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW   138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        

Chain H from PDB  Type:PROTEIN  Length:138
 aligned with RS8_THET8 | P0DOY9 from UniProtKB/Swiss-Prot  Length:138

    Alignment length:138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        
          RS8_THET8       1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW   138
               SCOP domains d2uubh1 H:1-138 Ribosomal protein S8                                                                                                       SCOP domains
               CATH domains --2uubH01 H:3-80  [code=3.30.1370.30, no name defined]                          2uubH02 H:81-138  [code=3.30.1490.10, no name defined]     CATH domains
               Pfam domains ---Ribosomal_S8-2uubH01 H:4-138                                                                                                            Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh....ee....hhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee..................eeee........eehhhhh.hhhhhh.eeeeee..eeeehhhhhhh...eeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------RIBOSOMAL_S8      ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
               2uub H     1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW   138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        

Chain I from PDB  Type:PROTEIN  Length:127
 aligned with RS9_THET8 | P80374 from UniProtKB/Swiss-Prot  Length:128

    Alignment length:127
                                    11        21        31        41        51        61        71        81        91       101       111       121       
          RS9_THET8       2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR   128
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2uubI00 I:2-128  [code=3.30.230.10, no name defined]                                                                            CATH domains
               Pfam domains ------Ribosomal_S9-2uubI01 I:8-128                                                                                              Pfam domains
         Sec.struct. author ..eee.......eeeeeeee....eee...hhhhhh....hhhhhhhhhhhh.....eeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh............................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -----------------------------------------------------------------RIBOSOMAL_S9       ------------------------------------------- PROSITE (4)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub I     2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR   128
                                    11        21        31        41        51        61        71        81        91       101       111       121       

Chain J from PDB  Type:PROTEIN  Length:99
 aligned with RS10_THET8 | Q5SHN7 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:99
                                    12        22        32        42        52        62        72        82        92         
         RS10_THET8       3 KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKTV   101
               SCOP domains d2uubj1 J:3-100 Ribosomal protein S10                                                             - SCOP domains
               CATH domains 2uubJ00 J:3-101  [code=3.30.70.600, no name defined]                                                CATH domains
               Pfam domains -Ribosomal_S10-2uubJ01 J:4-100                                                                    - Pfam domains
         Sec.struct. author ..eeeeee.hhhhhhhhhhhhhhhhhh.......eeeeeeeeeeee.............eeeeeeeeeeee.....................ee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ------------------------RIBOSOMAL_S10   ----------------------------------------------------------- PROSITE (7)
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
               2uub J     3 KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKTV   101
                                    12        22        32        42        52        62        72        82        92         

Chain K from PDB  Type:PROTEIN  Length:119
 aligned with RS11_THET8 | P80376 from UniProtKB/Swiss-Prot  Length:129

    Alignment length:119
                                    20        30        40        50        60        70        80        90       100       110       120         
         RS11_THET8      11 KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRKAS   129
               SCOP domains d2uubk1 K:11-129 Ribosomal protein S11                                                                                  SCOP domains
               CATH domains 2uubK00 K:11-129  [code=3.30.420.80, no name defined]                                                                   CATH domains
               Pfam domains ------Ribosomal_S11-2uubK01 K:17-126                                                                                --- Pfam domains
         Sec.struct. author .....eeeeeeee....eeeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....hhhhhhhhhhh...eeee.ee...........hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------RIBOSOMAL_S11          ------------ PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
               2uub K    11 KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRKAS   129
                                    20        30        40        50        60        70        80        90       100       110       120         

Chain L from PDB  Type:PROTEIN  Length:125
 aligned with RS12_THET8 | Q5SHN3 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
         RS12_THET8       2 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAA   126
               SCOP domains d2uubl1 L:5-122 Ribosomal protein S12                                                                                 ------- SCOP domains
               CATH domains 2uubL00 L:5-129 Nucleic acid-binding proteins                                                                                 CATH domains
               Pfam domains Ribosomal_S12-2uubL01 L:5-126                                                                                             --- Pfam domains
         Sec.struct. author .hhhhhhhhh..................eeeeeeeeeee.........eeeeeeee....eeeee............eeee............ee.............................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) -----------------------------------------RIBOSOMA---------------------------------------------------------------------------- PROSITE (7)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub L     5 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAA   129
                                    14        24        34        44        54        64        74        84        94       104       114       124     

Chain M from PDB  Type:PROTEIN  Length:125
 aligned with RS13_THET8 | P80377 from UniProtKB/Swiss-Prot  Length:126

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
         RS13_THET8       2 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK   126
               SCOP domains d2uubm1 M:2-126 Ribosomal protein S13                                                                                         SCOP domains
               CATH domains -----------------------------------------------------------------------2uubM02 M:73-126 30s ribosomal protein s13, domain 2   CATH domains
               Pfam domains -Ribosomal_S13-2uubM01 M:3-109                                                                              ----------------- Pfam domains
         Sec.struct. author ............hhhhhhh.....hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhh...........hhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --RIBOSOMAL_S13_2  PDB: M:4-112 UniProt: 4-112                                                                 -------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------RIBOSOMAL_S13_------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
               2uub M     2 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK   126
                                    11        21        31        41        51        61        71        81        91       101       111       121     

Chain N from PDB  Type:PROTEIN  Length:60
 aligned with RS14Z_THEAQ | A0A0N0BLP2 from UniProtKB/Swiss-Prot  Length:61

    Alignment length:60
                                    11        21        31        41        51        61
        RS14Z_THEAQ       2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRYFGLCRICLRELAHKGQLPGVKKASW    61
               SCOP domains d2uubn1 N:2-61 Ribosomal protein S14                         SCOP domains
               CATH domains 2uubN00 N:2-61 30s Ribosomal Protein S14; Chain N            CATH domains
               Pfam domains ----Ribosomal_S14-2uubN01 N:6-60                           - Pfam domains
         Sec.struct. author .hhhhhhhhh....hhhhh...................hhhhhhhhhhhh.....ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ------------------------------------------------------------ PROSITE (3)
                PROSITE (4) ---------------------RIBOSOMAL_S14          ---------------- PROSITE (4)
                 Transcript ------------------------------------------------------------ Transcript
               2uub N     2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW    61
                                    11        21        31        41        51        61

Chain N from PDB  Type:PROTEIN  Length:60
 aligned with RS14Z_THET8 | P0DOY6 from UniProtKB/Swiss-Prot  Length:61

    Alignment length:60
                                    11        21        31        41        51        61
        RS14Z_THET8       2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW    61
               SCOP domains d2uubn1 N:2-61 Ribosomal protein S14                         SCOP domains
               CATH domains 2uubN00 N:2-61 30s Ribosomal Protein S14; Chain N            CATH domains
               Pfam domains ----Ribosomal_S14-2uubN01 N:6-60                           - Pfam domains
         Sec.struct. author .hhhhhhhhh....hhhhh...................hhhhhhhhhhhh.....ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ------------------------------------------------------------ PROSITE (3)
                PROSITE (4) ------------------------------------------------------------ PROSITE (4)
                PROSITE (5) ---------------------RIBOSOMAL_S14          ---------------- PROSITE (5)
                 Transcript ------------------------------------------------------------ Transcript
               2uub N     2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW    61
                                    11        21        31        41        51        61

Chain O from PDB  Type:PROTEIN  Length:88
 aligned with RS15_THET8 | Q5SJ76 from UniProtKB/Swiss-Prot  Length:89

    Alignment length:88
                                    11        21        31        41        51        61        71        81        
         RS15_THET8       2 PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG    89
               SCOP domains d2uubo1 O:2-89 Ribosomal protein S15                                                     SCOP domains
               CATH domains 2uubO00 O:2-89  [code=1.10.287.10, no name defined]                                      CATH domains
               Pfam domains ----Ribosomal_S15-2uubO01 O:6-88                                                       - Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ---------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ---------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ---------------------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) ---------------------------------------------------------------------------------------- PROSITE (8)
                PROSITE (9) -------------------------------------RIBOSOMAL_S15  PDB: O:39-69    -------------------- PROSITE (9)
                 Transcript ---------------------------------------------------------------------------------------- Transcript
               2uub O     2 PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG    89
                                    11        21        31        41        51        61        71        81        

Chain P from PDB  Type:PROTEIN  Length:84
 aligned with RS16_THET8 | Q5SJH3 from UniProtKB/Swiss-Prot  Length:88

    Alignment length:84
                                    10        20        30        40        50        60        70        80    
         RS16_THET8       1 MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEA    84
               SCOP domains d2uubp1 P:1-83 Ribosomal protein S16                                               - SCOP domains
               CATH domains 2uubP00 P:1-84  [code=3.30.1320.10, no name defined]                                 CATH domains
               Pfam domains -------Ribosomal_S16-2uubP01 P:8-67                                ----------------- Pfam domains
         Sec.struct. author .eeeeeee........eeeeeee..........eeeeee.........eeehhhhhhhhhhh..eehhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
               2uub P     1 MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEA    84
                                    10        20        30        40        50        60        70        80    

Chain Q from PDB  Type:PROTEIN  Length:104
 aligned with RS17_THEAQ | A0A0N0BLS5 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
         RS17_THEAQ       2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEERYKVGDVVEIIEARPISKRKRFRVLRLVEEGRLDLVEKYLVRRQNYASLSKRGGKA   105
               SCOP domains d2uubq1 Q:2-101 Ribosomal protein S17                                                               ---- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------Ribosomal_S17-2uubQ01 Q:8-76                                         ----------------------------- Pfam domains
         Sec.struct. author ...eeeeee.......eeeeeeeeeeee...eeeeeeeeeeeee..........eeeeeeeeeee..eeeeeeeeee..hhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------RIBOSOMAL_S17--------------------------------------- PROSITE (4)
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
               2uub Q     2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSKRGGKA   105
                                    11        21        31        41        51        61        71        81        91       101    

Chain Q from PDB  Type:PROTEIN  Length:104
 aligned with RS17_THET8 | P0DOY7 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
         RS17_THET8       2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSKRGGKA   105
               SCOP domains d2uubq1 Q:2-101 Ribosomal protein S17                                                               ---- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------Ribosomal_S17-2uubQ01 Q:8-76                                         ----------------------------- Pfam domains
         Sec.struct. author ...eeeeee.......eeeeeeeeeeee...eeeeeeeeeeeee..........eeeeeeeeeee..eeeeeeeeee..hhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------RIBOSOMAL_S17--------------------------------------- PROSITE (5)
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
               2uub Q     2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSKRGGKA   105
                                    11        21        31        41        51        61        71        81        91       101    

Chain R from PDB  Type:PROTEIN  Length:73
 aligned with RS18_THET8 | Q5SLQ0 from UniProtKB/Swiss-Prot  Length:88

    Alignment length:73
                                    25        35        45        55        65        75        85   
         RS18_THET8      16 PSRKAKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVRK    88
               SCOP domains ---d2uubr1 R:19-88 Ribosomal protein S18                                  SCOP domains
               CATH domains 2uubR00 R:16-88 30s Ribosomal Protein S18                                 CATH domains
               Pfam domains ------------Ribosomal_S18-2uubR01 R:28-79                       --------- Pfam domains
         Sec.struct. author ....................hhhhhh..........hhhhhh.hhhhhhhhhhhhhhhhhh........ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) ----------------RIBOSOMAL_S18           --------------------------------- PROSITE (8)
                 Transcript ------------------------------------------------------------------------- Transcript
               2uub R    16 PSRKAKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVRK    88
                                    25        35        45        55        65        75        85   

Chain S from PDB  Type:PROTEIN  Length:81
 aligned with RS19_THET8 | Q5SHP2 from UniProtKB/Swiss-Prot  Length:93

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
         RS19_THET8       2 PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRG    82
               SCOP domains d2uubs1 S:2-81 Ribosomal protein S19                                            - SCOP domains
               CATH domains 2uubS00 S:2-82 30s Ribosomal Protein S19; Chain A                                 CATH domains
               Pfam domains -Ribosomal_S19-2uubS01 S:3-82                                                     Pfam domains
         Sec.struct. author ..........hhhhhhhhhh........eeee.......hhhhh..eeeee....eeeee.hhhhh...hhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------RIBOSOMAL_S19            ----- PROSITE (3)
                 Transcript --------------------------------------------------------------------------------- Transcript
               2uub S     2 PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRG    82
                                    11        21        31        41        51        61        71        81 

Chain T from PDB  Type:PROTEIN  Length:99
 aligned with RS20_THET8 | P80380 from UniProtKB/Swiss-Prot  Length:106

    Alignment length:99
                                    17        27        37        47        57        67        77        87        97         
         RS20_THET8       8 RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA   106
               SCOP domains d2uubt1 T:8-106 Ribosomal protein S20                                                               SCOP domains
               CATH domains 2uubT00 T:8-106  [code=1.20.58.110, no name defined]                                                CATH domains
               Pfam domains Ribosomal_S20p-2uubT01 T:8-90                                                      ---------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
               2uub T     8 RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA   106
                                    17        27        37        47        57        67        77        87        97         

Chain U from PDB  Type:PROTEIN  Length:25
 aligned with RSHX_THET8 | Q5SIH3 from UniProtKB/Swiss-Prot  Length:27

    Alignment length:25
                                    11        21     
         RSHX_THET8       2 GKGDRRTRRGKIWRGTYGKYRPRKK    26
               SCOP domains d2uubu1 U:2-25          - SCOP domains
               CATH domains ------------------------- CATH domains
               Pfam domains ------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------- SAPs(SNPs)
                    PROSITE ------------------------- PROSITE
                 Transcript ------------------------- Transcript
               2uub U     2 GKGDRRTRRGKIWRGTYGKYRPRKK    26
                                    11        21     

Chain X from PDB  Type:RNA  Length:5
                                       
               2uub X     1 GUUAA     5

Chain Y from PDB  Type:RNA  Length:11
                                             
               2uub Y    30 CCCUxACaAGG    40
                                |  |39 
                               34-CM0  
                                  37-6MZ

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (21, 21)

Asymmetric/Biological Unit
(-)
Class: Peptides (792)

(-) CATH Domains  (21, 22)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (22, 22)

Asymmetric/Biological Unit
(-)
Clan: DSRM (45)
(-)
Clan: H2TH (43)
(-)
Clan: KH (43)
(-)
Clan: OB (224)
(-)
Clan: S11_L18p (67)
(-)
Clan: S4 (23)
(-)
Clan: S5 (103)

(-) Gene Ontology  (13, 146)

Asymmetric/Biological Unit(hide GO term definitions)
Chain B   (RS2_THET8 | P80371)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
    GO:0015935    small ribosomal subunit    The smaller of the two subunits of a ribosome.

Chain C   (RS3_THET8 | P80372)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0003729    mRNA binding    Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
    GO:0003676    nucleic acid binding    Interacting selectively and non-covalently with any nucleic acid.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
    GO:0015935    small ribosomal subunit    The smaller of the two subunits of a ribosome.

Chain D   (RS4_THET8 | P80373)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
    GO:0015935    small ribosomal subunit    The smaller of the two subunits of a ribosome.

Chain E   (RS5_THET8 | Q5SHQ5)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
    GO:0015935    small ribosomal subunit    The smaller of the two subunits of a ribosome.

Chain F   (RS6_THET8 | Q5SLP8)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain G   (RS7_THET8 | P17291)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
    GO:0015935    small ribosomal subunit    The smaller of the two subunits of a ribosome.

Chain H   (RS8_THEAQ | A0A0M9AFS9)

Chain H   (RS8_THET8 | P0DOY9)

Chain I   (RS9_THET8 | P80374)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain J   (RS10_THET8 | Q5SHN7)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain K   (RS11_THET8 | P80376)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain L   (RS12_THET8 | Q5SHN3)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
    GO:0015935    small ribosomal subunit    The smaller of the two subunits of a ribosome.

Chain M   (RS13_THET8 | P80377)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0003676    nucleic acid binding    Interacting selectively and non-covalently with any nucleic acid.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain N   (RS14Z_THEAQ | A0A0N0BLP2)

Chain N   (RS14Z_THET8 | P0DOY6)

Chain O   (RS15_THET8 | Q5SJ76)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain P   (RS16_THET8 | Q5SJH3)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain Q   (RS17_THET8 | P0DOY7)

Chain Q   (RS17_THEAQ | A0A0N0BLS5)

Chain R   (RS18_THET8 | Q5SLQ0)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain S   (RS19_THET8 | Q5SHP2)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
    GO:0015935    small ribosomal subunit    The smaller of the two subunits of a ribosome.

Chain T   (RS20_THET8 | P80380)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain U   (RSHX_THET8 | Q5SIH3)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

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