No.	Name	Count	Type	Full Name
1	6MZ	1	Mod. Nucleotide	N6-METHYLADENOSINE-5'-MONOPHOSPHATE
2	CM0	1	Mod. Nucleotide	5-(CARBOXYMETHOXY) URIDINE-5'-MONOPHOSPHATE
3	K	22	Ligand/Ion	POTASSIUM ION
4	MG	170	Ligand/Ion	MAGNESIUM ION
5	PAR	1	Ligand/Ion	PAROMOMYCIN
6	ZN	2	Ligand/Ion	ZINC ION

No.	Name	Evidence	Residues	Description
001	AC1	SOFTWARE	G A:1405 , U A:1406 , C A:1407 , A A:1408 , C A:1490 , G A:1491 , A A:1492 , A A:1493 , G A:1494 , U A:1495	BINDING SITE FOR RESIDUE PAR Z 1
002	AC2	SOFTWARE	G A:284 , G A:285	BINDING SITE FOR RESIDUE MG Z 4
003	AC3	SOFTWARE	G A:730 , G A:731	BINDING SITE FOR RESIDUE MG Z 5
004	AC4	SOFTWARE	G A:1120	BINDING SITE FOR RESIDUE MG Z 6
005	AC5	SOFTWARE	C A:519 , A A:520	BINDING SITE FOR RESIDUE MG Z 7
006	AC6	SOFTWARE	G A:581 , G A:758	BINDING SITE FOR RESIDUE MG Z 10
007	AC7	SOFTWARE	G A:592 , G A:593 , G A:594 , U A:646 , K A:1771	BINDING SITE FOR RESIDUE MG Z 12
008	AC8	SOFTWARE	G A:1048 , U A:1049 , ALA N:2	BINDING SITE FOR RESIDUE MG Z 14
009	AC9	SOFTWARE	G A:260 , U A:261 , U A:264 , ARG T:83	BINDING SITE FOR RESIDUE MG Z 15
010	BC1	SOFTWARE	C A:58 , A A:59 , U A:387 , G A:388	BINDING SITE FOR RESIDUE MG Z 16
011	BC2	SOFTWARE	G A:11 , U A:12 , G A:21 , G A:22	BINDING SITE FOR RESIDUE MG Z 17
012	BC3	SOFTWARE	A A:665 , G A:666 , G A:667	BINDING SITE FOR RESIDUE MG Z 19
013	BC4	SOFTWARE	C A:882	BINDING SITE FOR RESIDUE MG Z 20
014	BC5	SOFTWARE	G A:584	BINDING SITE FOR RESIDUE MG Z 23
015	BC6	SOFTWARE	C A:749 , G A:750	BINDING SITE FOR RESIDUE MG Z 31
016	BC7	SOFTWARE	A A:684 , G A:685	BINDING SITE FOR RESIDUE MG Z 32
017	BC8	SOFTWARE	A A:766	BINDING SITE FOR RESIDUE MG Z 34
018	BC9	SOFTWARE	A A:768	BINDING SITE FOR RESIDUE MG Z 35
019	CC1	SOFTWARE	G A:773 , G A:774	BINDING SITE FOR RESIDUE MG Z 37
020	CC2	SOFTWARE	A A:780 , G A:800	BINDING SITE FOR RESIDUE MG Z 39
021	CC3	SOFTWARE	G A:576 , C A:578	BINDING SITE FOR RESIDUE MG Z 40
022	CC4	SOFTWARE	G A:362	BINDING SITE FOR RESIDUE MG Z 42
023	CC5	SOFTWARE	A A:509 , A A:510	BINDING SITE FOR RESIDUE MG Z 45
024	CC6	SOFTWARE	U A:560 , C A:562	BINDING SITE FOR RESIDUE MG Z 46
025	CC7	SOFTWARE	U A:14	BINDING SITE FOR RESIDUE MG Z 47
026	CC8	SOFTWARE	A A:572	BINDING SITE FOR RESIDUE MG Z 48
027	CC9	SOFTWARE	G A:21	BINDING SITE FOR RESIDUE MG Z 49
028	DC1	SOFTWARE	C A:48 , U A:49 , G A:115	BINDING SITE FOR RESIDUE MG Z 50
029	DC2	SOFTWARE	G A:595 , C A:596 , G A:597 , U A:598	BINDING SITE FOR RESIDUE MG Z 51
030	DC3	SOFTWARE	G A:825 , G A:874	BINDING SITE FOR RESIDUE MG Z 52
031	DC4	SOFTWARE	G A:858 , G A:869	BINDING SITE FOR RESIDUE MG Z 53
032	DC5	SOFTWARE	A A:860	BINDING SITE FOR RESIDUE MG Z 56
033	DC6	SOFTWARE	G A:637 , G A:638	BINDING SITE FOR RESIDUE MG Z 57
034	DC7	SOFTWARE	G A:885 , G A:886 , U A:911	BINDING SITE FOR RESIDUE MG Z 58
035	DC8	SOFTWARE	A A:937 , A A:938	BINDING SITE FOR RESIDUE MG Z 60
036	DC9	SOFTWARE	C A:934	BINDING SITE FOR RESIDUE MG Z 61
037	EC1	SOFTWARE	C A:962	BINDING SITE FOR RESIDUE MG Z 62
038	EC2	SOFTWARE	G A:1370 , G A:1371	BINDING SITE FOR RESIDUE MG Z 64
039	EC3	SOFTWARE	C A:620 , A A:621	BINDING SITE FOR RESIDUE MG Z 67
040	EC4	SOFTWARE	G A:587 , G A:588	BINDING SITE FOR RESIDUE MG Z 70
041	EC5	SOFTWARE	G A:944 , G A:945	BINDING SITE FOR RESIDUE MG Z 72
042	EC6	SOFTWARE	U A:1351	BINDING SITE FOR RESIDUE MG Z 73
043	EC7	SOFTWARE	A A:964 , U A:1199	BINDING SITE FOR RESIDUE MG Z 74
044	EC8	SOFTWARE	C A:979 , C A:980 , U A:981 , G A:1222	BINDING SITE FOR RESIDUE MG Z 75
045	EC9	SOFTWARE	C A:980	BINDING SITE FOR RESIDUE MG Z 76
046	FC1	SOFTWARE	G A:1013	BINDING SITE FOR RESIDUE MG Z 78
047	FC2	SOFTWARE	G A:1053 , C A:1054 , G A:1197 , K A:1780	BINDING SITE FOR RESIDUE MG Z 79
048	FC3	SOFTWARE	C A:1054 , G A:1197 , G A:1198	BINDING SITE FOR RESIDUE MG Z 80
049	FC4	SOFTWARE	G A:1294 , G A:1295	BINDING SITE FOR RESIDUE MG Z 81
050	FC5	SOFTWARE	G A:1441 , THR T:35	BINDING SITE FOR RESIDUE MG Z 82
051	FC6	SOFTWARE	G A:1461 , G A:1462	BINDING SITE FOR RESIDUE MG Z 83
052	FC7	SOFTWARE	G A:1417 , G A:1482	BINDING SITE FOR RESIDUE MG Z 86
053	FC8	SOFTWARE	A A:915	BINDING SITE FOR RESIDUE MG Z 87
054	FC9	SOFTWARE	G A:299 , A A:300 , G A:558 , U A:560 , G A:566	BINDING SITE FOR RESIDUE MG Z 89
055	GC1	SOFTWARE	G A:324	BINDING SITE FOR RESIDUE MG Z 90
056	GC2	SOFTWARE	A A:572 , A A:573 , A A:574	BINDING SITE FOR RESIDUE MG Z 91
057	GC3	SOFTWARE	A A:608	BINDING SITE FOR RESIDUE MG Z 93
058	GC4	SOFTWARE	G A:700	BINDING SITE FOR RESIDUE MG Z 94
059	GC5	SOFTWARE	A A:53	BINDING SITE FOR RESIDUE MG Z 95
060	GC6	SOFTWARE	A A:1110 , C A:1189	BINDING SITE FOR RESIDUE MG Z 97
061	GC7	SOFTWARE	A A:865 , C A:866 , G A:1079	BINDING SITE FOR RESIDUE MG Z 98
062	GC8	SOFTWARE	A A:1067 , G A:1068 , G A:1094 , G A:1387	BINDING SITE FOR RESIDUE MG Z 99
063	GC9	SOFTWARE	G A:1224	BINDING SITE FOR RESIDUE MG Z 103
064	HC1	SOFTWARE	G A:903	BINDING SITE FOR RESIDUE MG Z 105
065	HC2	SOFTWARE	C A:924 , G A:925 , G A:927 , U A:1390 , U A:1391	BINDING SITE FOR RESIDUE MG Z 107
066	HC3	SOFTWARE	U A:1498 , A A:1499 , A A:1500 , G A:1504 , G A:1505	BINDING SITE FOR RESIDUE MG Z 112
067	HC4	SOFTWARE	G A:38	BINDING SITE FOR RESIDUE MG Z 115
068	HC5	SOFTWARE	G A:138 , G A:139	BINDING SITE FOR RESIDUE MG Z 116
069	HC6	SOFTWARE	A A:172	BINDING SITE FOR RESIDUE MG Z 117
070	HC7	SOFTWARE	U A:180 , A A:195	BINDING SITE FOR RESIDUE MG Z 119
071	HC8	SOFTWARE	C A:536	BINDING SITE FOR RESIDUE MG Z 124
072	HC9	SOFTWARE	A A:116 , G A:117 , G A:289	BINDING SITE FOR RESIDUE MG Z 125
073	IC1	SOFTWARE	C A:352	BINDING SITE FOR RESIDUE MG Z 126
074	IC2	SOFTWARE	C A:372 , U A:375 , G A:376 , U A:387	BINDING SITE FOR RESIDUE MG Z 127
075	IC3	SOFTWARE	G A:410 , A A:431	BINDING SITE FOR RESIDUE MG Z 128
076	IC4	SOFTWARE	A A:782 , A A:794	BINDING SITE FOR RESIDUE MG Z 132
077	IC5	SOFTWARE	G A:1053 , G A:1058 , C A:1059 , G A:1198 , U A:1199	BINDING SITE FOR RESIDUE MG Z 133
078	IC6	SOFTWARE	C A:1303 , G A:1304 , ASP U:5	BINDING SITE FOR RESIDUE MG Z 134
079	IC7	SOFTWARE	GLU B:20 , ASP B:166 , ASP B:189 , ASP B:191 , ASP B:205	BINDING SITE FOR RESIDUE MG Z 137
080	IC8	SOFTWARE	CYS D:9 , CYS D:12 , LEU D:19 , CYS D:26 , CYS D:31	BINDING SITE FOR RESIDUE ZN Z 138
081	IC9	SOFTWARE	CYS N:24 , CYS N:27 , CYS N:40 , CYS N:43	BINDING SITE FOR RESIDUE ZN Z 139
082	JC1	SOFTWARE	G A:46 , C A:366 , U A:367 , G A:394	BINDING SITE FOR RESIDUE MG Z 141
083	JC2	SOFTWARE	G A:146 , G A:147 , MG A:1703	BINDING SITE FOR RESIDUE MG Z 142
084	JC3	SOFTWARE	G A:145 , G A:146 , MG A:1702	BINDING SITE FOR RESIDUE MG Z 143
085	JC4	SOFTWARE	U A:182 , G A:183	BINDING SITE FOR RESIDUE MG Z 145
086	JC5	SOFTWARE	U A:788 , U A:789 , A A:792	BINDING SITE FOR RESIDUE MG Z 146
087	JC6	SOFTWARE	U A:789 , A A:790 , G A:791	BINDING SITE FOR RESIDUE MG Z 147
088	JC7	SOFTWARE	U A:1528 , G A:1529 , G A:1530	BINDING SITE FOR RESIDUE MG Z 148
089	JC8	SOFTWARE	C A:518 , G A:530 , PRO L:48 , C X:3	BINDING SITE FOR RESIDUE MG Z 149
090	JC9	SOFTWARE	C A:518 , G A:529 , PRO L:48 , ASN L:49	BINDING SITE FOR RESIDUE MG Z 150
091	KC1	SOFTWARE	G A:1491 , THR L:44	BINDING SITE FOR RESIDUE MG Z 151
092	KC2	SOFTWARE	G A:255 , G A:265 , G A:266 , ILE Q:65	BINDING SITE FOR RESIDUE MG Z 153
093	KC3	SOFTWARE	C A:817 , G A:818 , C A:1527 , U A:1528	BINDING SITE FOR RESIDUE MG Z 154
094	KC4	SOFTWARE	LYS G:35 , ASN G:37 , LEU G:38	BINDING SITE FOR RESIDUE MG Z 157
095	KC5	SOFTWARE	C A:795 , C A:796 , U A:1506	BINDING SITE FOR RESIDUE MG Z 159
096	KC6	SOFTWARE	G A:69 , G A:70 , G A:98 , U A:99	BINDING SITE FOR RESIDUE MG Z 160
097	KC7	SOFTWARE	G A:575 , G A:576 , G A:758 , G A:821 , C A:880	BINDING SITE FOR RESIDUE MG Z 161
098	KC8	SOFTWARE	C A:58 , A A:59 , C A:386 , U A:387	BINDING SITE FOR RESIDUE MG Z 162
099	KC9	SOFTWARE	A A:33 , C A:398	BINDING SITE FOR RESIDUE MG Z 163
100	LC1	SOFTWARE	U A:37 , G A:38	BINDING SITE FOR RESIDUE MG Z 164
101	LC2	SOFTWARE	U A:12 , C A:526 , G A:527 , A A:914	BINDING SITE FOR RESIDUE MG Z 165
102	LC3	SOFTWARE	G A:902 , G A:903 , U A:1512	BINDING SITE FOR RESIDUE MG Z 166
103	LC4	SOFTWARE	U A:833 , C A:834 , G A:852 , G A:853	BINDING SITE FOR RESIDUE MG Z 167
104	LC5	SOFTWARE	U A:561 , LYS L:20	BINDING SITE FOR RESIDUE MG Z 168
105	LC6	SOFTWARE	A A:563 , C A:564 , ARG L:15 , TYR Q:32	BINDING SITE FOR RESIDUE MG Z 169
106	LC7	SOFTWARE	C A:934 , A A:935 , C A:936	BINDING SITE FOR RESIDUE MG Z 170
107	LC8	SOFTWARE	U A:921 , G A:922 , U A:1393	BINDING SITE FOR RESIDUE MG Z 171
108	LC9	SOFTWARE	G A:15 , A A:16 , U A:920 , A A:1396	BINDING SITE FOR RESIDUE MG Z 172
109	MC1	SOFTWARE	C A:174 , C A:175	BINDING SITE FOR RESIDUE MG Z 173
110	MC2	SOFTWARE	A A:969 , C A:970	BINDING SITE FOR RESIDUE MG Z 174
111	MC3	SOFTWARE	C A:972	BINDING SITE FOR RESIDUE MG Z 175
112	MC4	SOFTWARE	U A:1073 , G A:1074 , G A:1082 , U A:1083	BINDING SITE FOR RESIDUE MG Z 176
113	MC5	SOFTWARE	C A:121 , G A:124 , U A:125 , G A:126 , C A:235 , G A:236 , C A:237	BINDING SITE FOR RESIDUE MG Z 178
114	MC6	SOFTWARE	U A:125 , G A:126	BINDING SITE FOR RESIDUE MG Z 179
115	MC7	SOFTWARE	U A:1510 , G A:1511 , U A:1512 , U A:1522 , G A:1523 , C A:1524	BINDING SITE FOR RESIDUE MG Z 180
116	MC8	SOFTWARE	A A:1500 , G A:1504 , G A:1505 , A A:1507 , G A:1508 , MG A:1735	BINDING SITE FOR RESIDUE MG Z 181
117	MC9	SOFTWARE	A A:1499 , A A:1500 , G A:1508 , G A:1521 , MG A:1734	BINDING SITE FOR RESIDUE MG Z 182
118	NC1	SOFTWARE	A A:1396 , C A:1397 , A A:1398 , G A:1401 , C A:1402	BINDING SITE FOR RESIDUE MG Z 183
119	NC2	SOFTWARE	G A:61 , U A:62 , G A:105	BINDING SITE FOR RESIDUE MG Z 184
120	NC3	SOFTWARE	G A:29	BINDING SITE FOR RESIDUE MG Z 185
121	NC4	SOFTWARE	C A:280 , SER Q:39	BINDING SITE FOR RESIDUE MG Z 186
122	NC5	SOFTWARE	G A:251 , G A:266 , C A:267 , C A:268	BINDING SITE FOR RESIDUE MG Z 187
123	NC6	SOFTWARE	ASP Q:13 , MET Q:15 , GLU Q:49	BINDING SITE FOR RESIDUE MG Z 188
124	NC7	SOFTWARE	G A:316 , G A:317 , G A:318	BINDING SITE FOR RESIDUE MG Z 189
125	NC8	SOFTWARE	C A:314 , A A:315 , G A:318	BINDING SITE FOR RESIDUE MG Z 190
126	NC9	SOFTWARE	A A:315	BINDING SITE FOR RESIDUE MG Z 191
127	OC1	SOFTWARE	A A:329 , G A:332 , G A:333	BINDING SITE FOR RESIDUE MG Z 192
128	OC2	SOFTWARE	C A:403 , A A:547 , G A:548	BINDING SITE FOR RESIDUE MG Z 193
129	OC3	SOFTWARE	A A:563 , C A:564 , U A:565 , G A:566 , G A:567	BINDING SITE FOR RESIDUE MG Z 198
130	OC4	SOFTWARE	G A:604 , U A:605 , G A:633 , C A:634	BINDING SITE FOR RESIDUE MG Z 199
131	OC5	SOFTWARE	G A:830 , U A:831 , G A:855 , C A:856	BINDING SITE FOR RESIDUE MG Z 200
132	OC6	SOFTWARE	A A:889 , G A:890	BINDING SITE FOR RESIDUE MG Z 201
133	OC7	SOFTWARE	A A:1324 , C A:1363	BINDING SITE FOR RESIDUE MG Z 202
134	OC8	SOFTWARE	G A:1224 , A A:1225 , C A:1322 , GLN M:101	BINDING SITE FOR RESIDUE MG Z 203
135	OC9	SOFTWARE	A A:1319 , C A:1322	BINDING SITE FOR RESIDUE MG Z 204
136	PC1	SOFTWARE	U A:1083 , G A:1084 , ARG E:27	BINDING SITE FOR RESIDUE MG Z 205
137	PC2	SOFTWARE	U A:1330 , THR M:20 , ILE M:22 , TYR M:23 , ILE M:25	BINDING SITE FOR RESIDUE MG Z 206
138	PC3	SOFTWARE	A A:1238 , A A:1299 , C A:1335	BINDING SITE FOR RESIDUE MG Z 207
139	PC4	SOFTWARE	G A:926 , G A:1505 , C A:1543	BINDING SITE FOR RESIDUE MG Z 209
140	PC5	SOFTWARE	ALA D:82 , SER D:83 , LYS D:85 , GLY D:87 , THR D:89	BINDING SITE FOR RESIDUE MG Z 210
141	PC6	SOFTWARE	ARG F:80 , ARG F:82 , VAL F:85	BINDING SITE FOR RESIDUE MG Z 212
142	PC7	SOFTWARE	ILE E:13	BINDING SITE FOR RESIDUE MG Z 213
143	PC8	SOFTWARE	C A:940	BINDING SITE FOR RESIDUE MG Z 214
144	PC9	SOFTWARE	G A:876 , ALA H:7 , THR H:11 , ARG H:14	BINDING SITE FOR RESIDUE MG Z 215
145	QC1	SOFTWARE	ARG H:14 , HIS H:82 , ILE H:83	BINDING SITE FOR RESIDUE MG Z 216
146	QC2	SOFTWARE	U A:1495	BINDING SITE FOR RESIDUE MG Z 217
147	QC3	SOFTWARE	U A:1498	BINDING SITE FOR RESIDUE MG Z 218
148	QC4	SOFTWARE	A A:965 , G A:1197 , G A:1198	BINDING SITE FOR RESIDUE MG Z 219
149	QC5	SOFTWARE	G A:293 , A A:303 , U A:304 , G A:305	BINDING SITE FOR RESIDUE K Z 220
150	QC6	SOFTWARE	U A:133 , U A:229 , G A:230	BINDING SITE FOR RESIDUE K Z 221
151	QC7	SOFTWARE	U A:863	BINDING SITE FOR RESIDUE K Z 222
152	QC8	SOFTWARE	G A:577	BINDING SITE FOR RESIDUE K Z 223
153	QC9	SOFTWARE	G A:895	BINDING SITE FOR RESIDUE K Z 224
154	RC1	SOFTWARE	C A:291 , U A:304 , G A:305	BINDING SITE FOR RESIDUE K Z 225
155	RC2	SOFTWARE	G A:576 , G A:577	BINDING SITE FOR RESIDUE K Z 226
156	RC3	SOFTWARE	G A:898	BINDING SITE FOR RESIDUE K Z 227
157	RC4	SOFTWARE	U A:512 , U A:534 , A A:535	BINDING SITE FOR RESIDUE K Z 229
158	RC5	SOFTWARE	G A:664	BINDING SITE FOR RESIDUE K Z 230
159	RC6	SOFTWARE	A A:495 , A A:496	BINDING SITE FOR RESIDUE K Z 231
160	RC7	SOFTWARE	G A:594 , G A:595 , MG A:1609	BINDING SITE FOR RESIDUE K Z 232
161	RC8	SOFTWARE	G A:557 , G A:558	BINDING SITE FOR RESIDUE K Z 236
162	RC9	SOFTWARE	G A:688 , G A:700	BINDING SITE FOR RESIDUE K Z 238
163	SC1	SOFTWARE	U A:129 , G A:231 , G A:232	BINDING SITE FOR RESIDUE K Z 241
164	SC2	SOFTWARE	C A:1352 , LYS U:3	BINDING SITE FOR RESIDUE K Z 242
165	SC3	SOFTWARE	G A:490 , G A:491	BINDING SITE FOR RESIDUE K Z 243
166	SC4	SOFTWARE	G A:226 , G A:227	BINDING SITE FOR RESIDUE K Z 244
167	SC5	SOFTWARE	U A:1381 , ARG G:78	BINDING SITE FOR RESIDUE K Z 245
168	SC6	SOFTWARE	G A:928 , G A:929	BINDING SITE FOR RESIDUE K Z 246
169	SC7	SOFTWARE	C A:1054 , U A:1196 , G A:1197 , MG A:1663	BINDING SITE FOR RESIDUE K Z 250
170	SC8	SOFTWARE	GLU E:83	BINDING SITE FOR RESIDUE K Z 251

No.	Residues
1	D:26	-	D:31

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIBOSOMAL_S13_2	PS50159	Ribosomal protein S13 family profile.	RS13_THET8	4-112	1	M:4-112
2	S5_DSRBD	PS50881	S5 double stranded RNA-binding domain profile.	RS5_THET8	6-69	1	E:6-69
3	RIBOSOMAL_S2_1	PS00962	Ribosomal protein S2 signature 1.	RS2_THET8	7-18	1	B:7-18
4	RIBOSOMAL_S7	PS00052	Ribosomal protein S7 signature.	RS7_THET8	20-46	1	G:20-46
5	RIBOSOMAL_S14	PS00527	Ribosomal protein S14 signature.	RS14Z_THEAQ	23-45	1	N:23-45
				RS14Z_THET8	23-45	1	N:23-45
6	RIBOSOMAL_S5	PS00585	Ribosomal protein S5 signature.	RS5_THET8	23-55	1	E:23-55
7	RIBOSOMAL_S10	PS00361	Ribosomal protein S10 signature.	RS10_THET8	27-42	1	J:27-42
8	RIBOSOMAL_S18	PS00057	Ribosomal protein S18 signature.	RS18_THET8	32-55	1	R:32-55
9	KH_TYPE_2	PS50823	Type-2 KH domain profile.	RS3_THET8	39-107	1	C:39-107
10	RIBOSOMAL_S15	PS00362	Ribosomal protein S15 signature.	RS15_THET8	39-69	1	O:39-69
11	RIBOSOMAL_S12	PS00055	Ribosomal protein S12 signature.	RS12_THET8	43-50	1	L:46-53
12	RIBOSOMAL_S6	PS01048	Ribosomal protein S6 signature.	RS6_THET8	44-53	1	F:44-53
13	RIBOSOMAL_S19	PS00323	Ribosomal protein S19 signature.	RS19_THET8	53-77	1	S:53-77
14	RIBOSOMAL_S17	PS00056	Ribosomal protein S17 signature.	RS17_THET8	54-66	1	Q:54-66
				RS17_THEAQ	54-66	1	Q:54-66
15	RIBOSOMAL_S9	PS00360	Ribosomal protein S9 signature.	RS9_THET2	67-85	1	I:67-85
				RS9_THET8	67-85	1	I:67-85
16	RIBOSOMAL_S13_1	PS00646	Ribosomal protein S13 signature.	RS13_THET8	88-101	1	M:88-101
17	RIBOSOMAL_S11	PS00054	Ribosomal protein S11 signature.	RS11_THET8	95-117	1	K:95-117
18	RIBOSOMAL_S4	PS00632	Ribosomal protein S4 signature.	RS4_THET8	97-121	1	D:97-121
19	S4	PS50889	S4 RNA-binding domain profile.	RS4_THET8	99-161	1	D:99-161
20	RIBOSOMAL_S8	PS00053	Ribosomal protein S8 signature.	RS8_THEAQ	108-125	1	H:108-125
				RS8_THET8	108-125	1	H:108-125
21	RIBOSOMAL_S3	PS00548	Ribosomal protein S3 signature.	RS3_THET8	163-197	1	C:163-197

Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:RNA  Length:1512
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               2uua A     5 UGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCCUUUCU  1544
                                    14        24        34        44        54        64        76       |89   ||  101       111       121       130       140       150       160       170       180      189A||||||189K|      198     ||219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439|      450       461|      480       490     ||501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841|      857       867       877       887       897       907       917       927       937       947       957       967       977       987       997    | 1006      1016      1026    ||1032      1042      1052      1062      1072      1082      1092      1102      1112      1122      1132      1142      1152      1162   || 1173      1183      1193      1203      1213      1223      1233      1243      1253      1263      1273      1283      1293      1303      1313      1323      1333      1343      1353      1363|     1372      1382      1392      1402      1412      1422      1432      1442||    1457      1467      1477      1487      1497      1507      1517      1527     |1542  
                                                                                               73|      84|   93|                              129A                                                         189A|||||189J||            204|                                                                                                                                                                                                                            439|              458|||    477|              496|                                                                                                                                                                                                                                                                                                                                                    841|                                                                                                                                                     1001A                         1030A|||                                                                                                                                    1166|                                                                                                                                                                                               1363A                                                                           1442A| 1447||                                                                         1533|     
                                                                                                76       88    96                                                                                            189B|||||189K|             216                                                                                                                                                                                                                             441               460||     479               498                                                                                                                                                                                                                                                                                                                                                     848                                                                                                                                                                                    1030B||                                                                                                                                     1168                                                                                                                                                                                                                                                                                1442B  1452|                                                                          1539     
                                                                                                                                                                                                              189C|||||189L                                                                                                                                                                                                                                                                461|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       1030C|                                                                                                                                                                                                                                                                                                                                                                                                                                 1456                                                                                   
                                                                                                                                                                                                               189D|||||                                                                                                                                                                                                                                                                    470                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        1030D                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
                                                                                                                                                                                                                189E||||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                 189F|||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                  189G||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                   189H|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                    189I                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            

Chain B from PDB  Type:PROTEIN  Length:235
 aligned with RS2_THET8 | P80371 from UniProtKB/Swiss-Prot  Length:256

    Alignment length:235
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236     
          RS2_THET8       7 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQE   241
               SCOP domains d2uuab1 B:7-240 Ribosomal protein S2                                                                                                                                                                                                      - SCOP domains
               CATH domains -----------------2uuaB01 B:24-97,B:154-241                                                 --------------------------------------------------------2uuaB01 B:24-97,B:154-241 Glucose-6-phosphate isomerase like protein; domain 1           CATH domains
               Pfam domains ---Ribosomal_S2-2uuaB01 B:10-226                                                                                                                                                                                            --------------- Pfam domains
         Sec.struct. author ..................hhhhhh.eeeee..eeeehhhhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh....ee..........hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh...........eeee.....hhhhhhhhhhh...eeeee....hhhhh.eeee....hhhhhhhhhhhhhhhhhh........hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) RIBOSOMAL_S2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua B     7 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQE   241
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236     

Chain C from PDB  Type:PROTEIN  Length:207
 aligned with RS3_THET8 | P80372 from UniProtKB/Swiss-Prot  Length:239

    Alignment length:207
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       
          RS3_THET8       2 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEVI   208
               SCOP domains d2uuac1 C:2-106 Ribosomal protein S3 N-terminal domain                                                   d2uuac2 C:107-207 Ribosomal protein S3 C-terminal domain                                             - SCOP domains
               CATH domains ---------------2uuaC01 C:17-107  [code=3.30.300.20, no name defined]                                      2uuaC02 C:108-208  [code=3.30.1140.32, no name defined]                                               CATH domains
               Pfam domains ------------------------------------KH_2-2uuaC01 C:38-111                                                     -------Ribosomal_S3_C-2uuaC02 C:119-202                                                    ------ Pfam domains
         Sec.struct. author ..........................hhhhhhhhhhhhhhhhhhhh..........ee....ee..eee..hhhhhh..hhhhhhhhhhhhhhh.......eee......hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeeeeee.hhhh...eeeeeeee..........eeeeeeee......eeeeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (8)
                PROSITE (9) -------------------------------------KH_TYPE_2  PDB: C:39-107 UniProt: 39-107                             ----------------------------------------------------------------------------------------------------- PROSITE (9)
                PROSITE (1) -----------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_S3  PDB: C:163-197       ----------- PROSITE (1)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua C     2 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEVI   208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       

Chain D from PDB  Type:PROTEIN  Length:208
 aligned with RS4_THET8 | P80373 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        
          RS4_THET8       2 GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR   209
               SCOP domains d2uuad1 D:2-209 Ribosomal protein S4                                                                                                                                                                             SCOP domains
               CATH domains 2uuaD01 D:2-97,D:195-209 Ribosomal Protein S4 Delta 41; Chain A, domain 1                       2uuaD02 D:98-194                                                                                 2uuaD01         CATH domains
               Pfam domains Ribosomal_S4-2uuaD02 D:2-98                                                                      S4-2uuaD01 D:99-146                             --------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhh....................................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhh....hhhhhhhhhhh..eee..ee............eeee.hhhh.hhhhhhhhhhh........eeee....eeee....hhhhh....hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -----------------------------------------------------------------------------------------------RIBOSOMAL_S4             ---------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -------------------------------------------------------------------------------------------------S4  PDB: D:99-161 UniProt: 99-161                              ------------------------------------------------ PROSITE (5)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua D     2 GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR   209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        

Chain E from PDB  Type:PROTEIN  Length:151
 aligned with RS5_THET8 | Q5SHQ5 from UniProtKB/Swiss-Prot  Length:162

    Alignment length:151
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154 
          RS5_THET8       5 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKGE   155
               SCOP domains d2uuae2 E:5-73 Ribosomal S5 protein, N-terminal domain               d2uuae1 E:74-154 Ribosomal protein S5, C-terminal domain                         - SCOP domains
               CATH domains 2uuaE01 E:5-68  [code=3.30.160.20, no name defined]             2uuaE02 E:69-143  [code=3.30.230.10, no name defined]                      ------------ CATH domains
               Pfam domains Ribosomal_S5-2uuaE01 E:5-71                                        --------Ribosomal_S5_C-2uuaE02 E:80-153                                           -- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeee..eeeeeeeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhh.eee...........eeeee..eeeeeee......ee.hhhhhhhhhhh....eeeeeee..hhhhhhhhhhhhhhh..hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -S5_DSRBD  PDB: E:6-69 UniProt: 6-69                             -------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ------------------RIBOSOMAL_S5  PDB: E:23-55       ---------------------------------------------------------------------------------------------------- PROSITE (6)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua E     5 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKGE   155
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154 

Chain F from PDB  Type:PROTEIN  Length:101
 aligned with RS6_THET8 | Q5SLP8 from UniProtKB/Swiss-Prot  Length:101

    Alignment length:101
                                    10        20        30        40        50        60        70        80        90       100 
          RS6_THET8       1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQEPFLANA   101
               SCOP domains d2uuaf1 F:1-101 Ribosomal protein S6                                                                  SCOP domains
               CATH domains 2uuaF00 F:1-101  [code=3.30.70.60, no name defined]                                                   CATH domains
               Pfam domains -Ribosomal_S6-2uuaF01 F:2-93                                                                 -------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhhhh.........eeeeeeeee..eeeeeee....eehhhhhhhhhhhhh....eeeeeeee.....ee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ----------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ----------------------------------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) -------------------------------------------RIBOSOMAL_------------------------------------------------ PROSITE (8)
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
               2uua F     1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQEPFLANA   101
                                    10        20        30        40        50        60        70        80        90       100 

Chain G from PDB  Type:PROTEIN  Length:155
 aligned with RS7_THET8 | P17291 from UniProtKB/Swiss-Prot  Length:156

    Alignment length:155
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     
          RS7_THET8       2 ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW   156
               SCOP domains d2uuag1 G:2-156 Ribosomal protein S7                                                                                                                        SCOP domains
               CATH domains 2uuaG00 G:2-156 Ribosomal Protein S7;                                                                                                                       CATH domains
               Pfam domains Ribosomal_S7-2uuaG01 G:2-149                                                                                                                        ------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh..eeeeeee....eeeeeee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------RIBOSOMAL_S7  PDB: G:20-46 -------------------------------------------------------------------------------------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua G     2 ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW   156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     

Chain H from PDB  Type:PROTEIN  Length:138
 aligned with RS8_THEAQ | A0A0M9AFS9 from UniProtKB/Swiss-Prot  Length:138

    Alignment length:138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        
          RS8_THEAQ       1 MLTDPIADMLTRIRNATRVYKESTEVPASRFKEEILKILAREGFIKGYERVEVDGKPYLRIHLKYGPRRQGPDPRPEQVIKHIRRISRPGRRVYVGVKEIPRVRRGLGIAILSTPKGVLTDREARKLGVGGELICEVW   138
               SCOP domains d2uuah1 H:1-138 Ribosomal protein S8                                                                                                       SCOP domains
               CATH domains --2uuaH01 H:3-80  [code=3.30.1370.30, no name defined]                          2uuaH02 H:81-138  [code=3.30.1490.10, no name defined]     CATH domains
               Pfam domains ---Ribosomal_S8-2uuaH01 H:4-138                                                                                                            Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee..................eeee........eehhhhh.hhhhhh.eeeeee..eeeehhhhhhh...eeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) -----------------------------------------------------------------------------------------------------------RIBOSOMAL_S8      ------------- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
               2uua H     1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW   138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        

Chain H from PDB  Type:PROTEIN  Length:138
 aligned with RS8_THET8 | P0DOY9 from UniProtKB/Swiss-Prot  Length:138

    Alignment length:138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        
          RS8_THET8       1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW   138
               SCOP domains d2uuah1 H:1-138 Ribosomal protein S8                                                                                                       SCOP domains
               CATH domains --2uuaH01 H:3-80  [code=3.30.1370.30, no name defined]                          2uuaH02 H:81-138  [code=3.30.1490.10, no name defined]     CATH domains
               Pfam domains ---Ribosomal_S8-2uuaH01 H:4-138                                                                                                            Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee..................eeee........eehhhhh.hhhhhh.eeeeee..eeeehhhhhhh...eeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------RIBOSOMAL_S8      ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
               2uua H     1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW   138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        

Chain I from PDB  Type:PROTEIN  Length:127
 aligned with RS9_THET2 | P62669 from UniProtKB/Swiss-Prot  Length:128

    Alignment length:127
                                    11        21        31        41        51        61        71        81        91       101       111       121       
          RS9_THET2       2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR   128
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2uuaI00 I:2-128  [code=3.30.230.10, no name defined]                                                                            CATH domains
               Pfam domains ------Ribosomal_S9-2uuaI01 I:8-128                                                                                              Pfam domains
         Sec.struct. author ..eee.......eeeeeeee....eee...hhhhhh....hhhhhhhhhhhh.....eeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhh............................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -----------------------------------------------------------------RIBOSOMAL_S9       ------------------------------------------- PROSITE (4)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua I     2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR   128
                                    11        21        31        41        51        61        71        81        91       101       111       121       

Chain I from PDB  Type:PROTEIN  Length:127
 aligned with RS9_THET8 | P80374 from UniProtKB/Swiss-Prot  Length:128

    Alignment length:127
                                    11        21        31        41        51        61        71        81        91       101       111       121       
          RS9_THET8       2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR   128
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2uuaI00 I:2-128  [code=3.30.230.10, no name defined]                                                                            CATH domains
               Pfam domains ------Ribosomal_S9-2uuaI01 I:8-128                                                                                              Pfam domains
         Sec.struct. author ..eee.......eeeeeeee....eee...hhhhhh....hhhhhhhhhhhh.....eeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhh............................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -----------------------------------------------------------------RIBOSOMAL_S9       ------------------------------------------- PROSITE (5)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua I     2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR   128
                                    11        21        31        41        51        61        71        81        91       101       111       121       

Chain J from PDB  Type:PROTEIN  Length:99
 aligned with RS10_THET8 | Q5SHN7 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:99
                                    12        22        32        42        52        62        72        82        92         
         RS10_THET8       3 KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKTV   101
               SCOP domains d2uuaj1 J:3-100 Ribosomal protein S10                                                             - SCOP domains
               CATH domains 2uuaJ00 J:3-101  [code=3.30.70.600, no name defined]                                                CATH domains
               Pfam domains -Ribosomal_S10-2uuaJ01 J:4-100                                                                    - Pfam domains
         Sec.struct. author .eeeeeee.hhhhhhhhhhhhhhhhhh.......eeeeeeeeeeee.............eeeeeeeeeeeee...................eeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ------------------------RIBOSOMAL_S10   ----------------------------------------------------------- PROSITE (7)
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
               2uua J     3 KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKTV   101
                                    12        22        32        42        52        62        72        82        92         

Chain K from PDB  Type:PROTEIN  Length:119
 aligned with RS11_THET8 | P80376 from UniProtKB/Swiss-Prot  Length:129

    Alignment length:119
                                    20        30        40        50        60        70        80        90       100       110       120         
         RS11_THET8      11 KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRKAS   129
               SCOP domains d2uuak1 K:11-129 Ribosomal protein S11                                                                                  SCOP domains
               CATH domains 2uuaK00 K:11-129  [code=3.30.420.80, no name defined]                                                                   CATH domains
               Pfam domains ------Ribosomal_S11-2uuaK01 K:17-126                                                                                --- Pfam domains
         Sec.struct. author .....eeeeeeee....eeeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee...hhhhhhhhhhh...eeee.ee...........hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------RIBOSOMAL_S11          ------------ PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
               2uua K    11 KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRKAS   129
                                    20        30        40        50        60        70        80        90       100       110       120         

Chain L from PDB  Type:PROTEIN  Length:125
 aligned with RS12_THET8 | Q5SHN3 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
         RS12_THET8       2 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAA   126
               SCOP domains d2uual1 L:5-122 Ribosomal protein S12                                                                                 ------- SCOP domains
               CATH domains 2uuaL00 L:5-129 Nucleic acid-binding proteins                                                                                 CATH domains
               Pfam domains Ribosomal_S12-2uuaL01 L:5-126                                                                                             --- Pfam domains
         Sec.struct. author .hhhhhhhh...................eeeeeee..ee.........eeeeeeee....eeeee............eeee............ee.............................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) -----------------------------------------RIBOSOMA---------------------------------------------------------------------------- PROSITE (7)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua L     5 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAA   129
                                    14        24        34        44        54        64        74        84        94       104       114       124     

Chain M from PDB  Type:PROTEIN  Length:125
 aligned with RS13_THET8 | P80377 from UniProtKB/Swiss-Prot  Length:126

    Alignment length:125
                                    11        21        31        41        51        61        71        81        91       101       111       121     
         RS13_THET8       2 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK   126
               SCOP domains d2uuam1 M:2-126 Ribosomal protein S13                                                                                         SCOP domains
               CATH domains -----------------------------------------------------------------------2uuaM02 M:73-126 30s ribosomal protein s13, domain 2   CATH domains
               Pfam domains -Ribosomal_S13-2uuaM01 M:3-109                                                                              ----------------- Pfam domains
         Sec.struct. author ............hhhhhhhh....hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhh...........hhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --RIBOSOMAL_S13_2  PDB: M:4-112 UniProt: 4-112                                                                 -------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------RIBOSOMAL_S13_------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
               2uua M     2 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK   126
                                    11        21        31        41        51        61        71        81        91       101       111       121     

Chain N from PDB  Type:PROTEIN  Length:60
 aligned with RS14Z_THEAQ | A0A0N0BLP2 from UniProtKB/Swiss-Prot  Length:61

    Alignment length:60
                                    11        21        31        41        51        61
        RS14Z_THEAQ       2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRYFGLCRICLRELAHKGQLPGVKKASW    61
               SCOP domains d2uuan1 N:2-61 Ribosomal protein S14                         SCOP domains
               CATH domains 2uuaN00 N:2-61 30s Ribosomal Protein S14; Chain N            CATH domains
               Pfam domains ----Ribosomal_S14-2uuaN01 N:6-60                           - Pfam domains
         Sec.struct. author .hhhhhhhhh............................hhhhhhhhhhhh.....ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ------------------------------------------------------------ PROSITE (3)
                PROSITE (4) ---------------------RIBOSOMAL_S14          ---------------- PROSITE (4)
                 Transcript ------------------------------------------------------------ Transcript
               2uua N     2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW    61
                                    11        21        31        41        51        61

Chain N from PDB  Type:PROTEIN  Length:60
 aligned with RS14Z_THET8 | P0DOY6 from UniProtKB/Swiss-Prot  Length:61

    Alignment length:60
                                    11        21        31        41        51        61
        RS14Z_THET8       2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW    61
               SCOP domains d2uuan1 N:2-61 Ribosomal protein S14                         SCOP domains
               CATH domains 2uuaN00 N:2-61 30s Ribosomal Protein S14; Chain N            CATH domains
               Pfam domains ----Ribosomal_S14-2uuaN01 N:6-60                           - Pfam domains
         Sec.struct. author .hhhhhhhhh............................hhhhhhhhhhhh.....ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ------------------------------------------------------------ PROSITE (3)
                PROSITE (4) ------------------------------------------------------------ PROSITE (4)
                PROSITE (5) ---------------------RIBOSOMAL_S14          ---------------- PROSITE (5)
                 Transcript ------------------------------------------------------------ Transcript
               2uua N     2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW    61
                                    11        21        31        41        51        61

Chain O from PDB  Type:PROTEIN  Length:88
 aligned with RS15_THET8 | Q5SJ76 from UniProtKB/Swiss-Prot  Length:89

    Alignment length:88
                                    11        21        31        41        51        61        71        81        
         RS15_THET8       2 PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG    89
               SCOP domains d2uuao1 O:2-89 Ribosomal protein S15                                                     SCOP domains
               CATH domains 2uuaO00 O:2-89  [code=1.10.287.10, no name defined]                                      CATH domains
               Pfam domains ----Ribosomal_S15-2uuaO01 O:6-88                                                       - Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ---------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ---------------------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ---------------------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) ---------------------------------------------------------------------------------------- PROSITE (8)
                PROSITE (9) ---------------------------------------------------------------------------------------- PROSITE (9)
               PROSITE (10) -------------------------------------RIBOSOMAL_S15  PDB: O:39-69    -------------------- PROSITE (10)
                 Transcript ---------------------------------------------------------------------------------------- Transcript
               2uua O     2 PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG    89
                                    11        21        31        41        51        61        71        81        

Chain P from PDB  Type:PROTEIN  Length:84
 aligned with RS16_THET8 | Q5SJH3 from UniProtKB/Swiss-Prot  Length:88

    Alignment length:84
                                    10        20        30        40        50        60        70        80    
         RS16_THET8       1 MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEA    84
               SCOP domains d2uuap1 P:1-83 Ribosomal protein S16                                               - SCOP domains
               CATH domains 2uuaP00 P:1-84  [code=3.30.1320.10, no name defined]                                 CATH domains
               Pfam domains -------Ribosomal_S16-2uuaP01 P:8-67                                ----------------- Pfam domains
         Sec.struct. author .eeeeeee........eeeeeee..........ee.eee.........eeehhhhhhhhhhh..eehhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
               2uua P     1 MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEA    84
                                    10        20        30        40        50        60        70        80    

Chain Q from PDB  Type:PROTEIN  Length:104
 aligned with RS17_THEAQ | A0A0N0BLS5 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
         RS17_THEAQ       2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEERYKVGDVVEIIEARPISKRKRFRVLRLVEEGRLDLVEKYLVRRQNYASLSKRGGKA   105
               SCOP domains d2uuaq1 Q:2-101 Ribosomal protein S17                                                               ---- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------Ribosomal_S17-2uuaQ01 Q:8-76                                         ----------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee..eeeeeeeeeeee...eeeeeeeeeeeee..........eeeeeeeeeee..eeeeeeeeee..hhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------RIBOSOMAL_S17--------------------------------------- PROSITE (4)
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
               2uua Q     2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSKRGGKA   105
                                    11        21        31        41        51        61        71        81        91       101    

Chain Q from PDB  Type:PROTEIN  Length:104
 aligned with RS17_THET8 | P0DOY7 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
         RS17_THET8       2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSKRGGKA   105
               SCOP domains d2uuaq1 Q:2-101 Ribosomal protein S17                                                               ---- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------Ribosomal_S17-2uuaQ01 Q:8-76                                         ----------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee..eeeeeeeeeeee...eeeeeeeeeeeee..........eeeeeeeeeee..eeeeeeeeee..hhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------RIBOSOMAL_S17--------------------------------------- PROSITE (5)
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
               2uua Q     2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSKRGGKA   105
                                    11        21        31        41        51        61        71        81        91       101    

Chain R from PDB  Type:PROTEIN  Length:73
 aligned with RS18_THET8 | Q5SLQ0 from UniProtKB/Swiss-Prot  Length:88

    Alignment length:73
                                    25        35        45        55        65        75        85   
         RS18_THET8      16 PSRKAKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVRK    88
               SCOP domains ---d2uuar1 R:19-88 Ribosomal protein S18                                  SCOP domains
               CATH domains 2uuaR00 R:16-88 30s Ribosomal Protein S18                                 CATH domains
               Pfam domains ------------Ribosomal_S18-2uuaR01 R:28-79                       --------- Pfam domains
         Sec.struct. author .............ee.....hhhhhh..........hhhhhh.hhhhhhhhhhhhhhhhhhh.......ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ------------------------------------------------------------------------- PROSITE (6)
                PROSITE (7) ------------------------------------------------------------------------- PROSITE (7)
                PROSITE (8) ----------------RIBOSOMAL_S18           --------------------------------- PROSITE (8)
                 Transcript ------------------------------------------------------------------------- Transcript
               2uua R    16 PSRKAKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVRK    88
                                    25        35        45        55        65        75        85   

Chain S from PDB  Type:PROTEIN  Length:81
 aligned with RS19_THET8 | Q5SHP2 from UniProtKB/Swiss-Prot  Length:93

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
         RS19_THET8       2 PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRG    82
               SCOP domains d2uuas1 S:2-81 Ribosomal protein S19                                            - SCOP domains
               CATH domains 2uuaS00 S:2-82 30s Ribosomal Protein S19; Chain A                                 CATH domains
               Pfam domains -Ribosomal_S19-2uuaS01 S:3-82                                                     Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhh...............hhhhh..eeeee....eeeee.........hhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------RIBOSOMAL_S19            ----- PROSITE (3)
                 Transcript --------------------------------------------------------------------------------- Transcript
               2uua S     2 PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRG    82
                                    11        21        31        41        51        61        71        81 

Chain T from PDB  Type:PROTEIN  Length:99
 aligned with RS20_THET8 | P80380 from UniProtKB/Swiss-Prot  Length:106

    Alignment length:99
                                    17        27        37        47        57        67        77        87        97         
         RS20_THET8       8 RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA   106
               SCOP domains d2uuat1 T:8-106 Ribosomal protein S20                                                               SCOP domains
               CATH domains 2uuaT00 T:8-106  [code=1.20.58.110, no name defined]                                                CATH domains
               Pfam domains Ribosomal_S20p-2uuaT01 T:8-90                                                      ---------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
               2uua T     8 RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA   106
                                    17        27        37        47        57        67        77        87        97         

Chain U from PDB  Type:PROTEIN  Length:25
 aligned with RSHX_THET8 | Q5SIH3 from UniProtKB/Swiss-Prot  Length:27

    Alignment length:25
                                    11        21     
         RSHX_THET8       2 GKGDRRTRRGKIWRGTYGKYRPRKK    26
               SCOP domains d2uuau1 U:2-25          - SCOP domains
               CATH domains ------------------------- CATH domains
               Pfam domains ------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------- SAPs(SNPs)
                    PROSITE ------------------------- PROSITE
                 Transcript ------------------------- Transcript
               2uua U     2 GKGDRRTRRGKIWRGTYGKYRPRKK    26
                                    11        21     

Chain X from PDB  Type:RNA  Length:5
                                       
               2uua X     1 GUCAA     5

Chain Y from PDB  Type:RNA  Length:13
                                               
               2uua Y    29 UCCCUxACaAGGA    41
                                 |  38   
                                34-CM0   
                                   37-6MZ

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'