Chain H from PDB Type:PROTEIN Length:216
SCOP domains --------------------------------------------------------------------------------------------------------------------d2ojzh1 H:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 2ojzH01 H:1-114 Immunoglobulins 2ojzH02 H:115-228 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhheeeeeee.....eeeeeeee..eeee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeee............eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eeeeeeeee..eeeeeeeeeee.........eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2ojz H 1 EVQLEESGPELVKPGASVKISCKASGYTFTDYYMNWLRQKPGQGLEWIGWVYPGSIKYNEKFKDKATLTADTSSSIVYMHLSSLTSDDNAVYFCTRWTYGSSFDYWGEGTLLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR 228
10 20 30 40 50 || 61 71 81 ||| 88 98 | 107 117 127 || 139 149 |||164 || 175 || 187 199|| 210 220 ||
52A| 82A|| 100A 130| 154||| 169| 180| 196||| 223|
55 82B| 133 156|| 171 183 199|| 226
82C 157| 200|
162 202
Chain I from PDB Type:PROTEIN Length:216
SCOP domains --------------------------------------------------------------------------------------------------------------------d2ojzi1 I:114-228 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 2ojzI01 I:1-114 Immunoglobulins 2ojzI02 I:115-228 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhheeeeeee.....eeeeeeee..eeee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeee............eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeeee.........eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2ojz I 1 EVQLEESGPELVKPGASVKISCKASGYTFTDYYMNWLRQKPGQGLEWIGWVYPGSIKYNEKFKDKATLTADTSSSIVYMHLSSLTSDDNAVYFCTRWTYGSSFDYWGEGTLLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR 228
10 20 30 40 50 || 61 71 81 ||| 88 98 | 107 117 127 || 139 149 |||164 || 175 || 187 199|| 210 220 ||
52A| 82A|| 100A 130| 154||| 169| 180| 196||| 223|
55 82B| 133 156|| 171 183 199|| 226
82C 157| 200|
162 202
Chain L from PDB Type:PROTEIN Length:218
aligned with A2NHM3_MOUSE | A2NHM3 from UniProtKB/TrEMBL Length:219
Alignment length:218
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
A2NHM3_MOUSE 1 DVLMTQTPLSLPVSLGDQASISCRSSQSIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE 218
SCOP domains d2ojzl1 L:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d2ojzl2 L:108-213 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 2ojzL01 L:1-108 Immunoglobulins -2ojzL02 L:110-209 Immunoglobulins ---- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ojz L 1 DILMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPTLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHIPLTFGAGTKLEVKRSDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE 213
10 20 27C|| 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205
27A||||
27B|||
27C||
27D|
27E
Chain M from PDB Type:PROTEIN Length:218
aligned with A2NHM3_MOUSE | A2NHM3 from UniProtKB/TrEMBL Length:219
Alignment length:218
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
A2NHM3_MOUSE 1 DVLMTQTPLSLPVSLGDQASISCRSSQSIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE 218
SCOP domains d2ojzm1 M:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d2ojzm2 M:108-213 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 2ojzM01 M:1-108 Immunoglobulins -2ojzM02 M:110-209 Immunoglobulins ---- CATH domains
Pfam domains (1) --V-set-2ojzM03 M:3-106 ------------C1-set-2ojzM01 M:119-206 ------- Pfam domains (1)
Pfam domains (2) --V-set-2ojzM04 M:3-106 ------------C1-set-2ojzM02 M:119-206 ------- Pfam domains (2)
Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ojz M 1 DILMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPTLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHIPLTFGAGTKLEVKRSDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE 213
10 20 27C|| 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205
27A||||
27B|||
27C||
27D|
27E
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |