SCOP Search:   
        by sunid, keyword
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(use 'Shift Left-Click' to collapse/expand all levels downwards; use 'Control Left-Click' to collapse/expand all levels upwards)
 
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Fold: DCoH-like (107)
(-)
Superfamily: C-terminal domain of arginine repressor (10)
(-)
Family: automated matches (3)
(-)
Protein domain: automated matches (3)
(-)
Mycobacterium tuberculosis [TaxId: 83332] (3)
2ZFZA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN HEXAMER OF ARGR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH ARGININE
3BUEA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN HEXAMER OF ARGR FROM MYCOBACTERIUM TUBERCULOSIS
3CAGA:; E:; F:; B:; C:; D:CRYSTAL STRUCTURE OF THE OLIGOMERIZATION DOMAIN HEXAMER OF THE ARGININE REPRESSOR PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH 9 ARGININES.
(-)
Family: C-terminal domain of arginine repressor (7)
(-)
Protein domain: C-terminal domain of arginine repressor (7)
(-)
Bacillus stearothermophilus [TaxId: 1422] (2)
1B4AA:79-149; B:79-149; C:79-149; D:79-149; E:79-149; F:79-149STRUCTURE OF THE ARGININE REPRESSOR FROM BACILLUS STEAROTHERMOPHILUS
1B4BA:; B:; C:STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF THE ARGININE REPRESSOR FROM BACILLUS STEAROTHERMOPHILUS
(-)
Bacillus subtilis [TaxId: 1423] (2)
1F9NA:79-149; B:79-149; C:79-149; D:79-149; E:79-149; F:79-149CRYSTAL STRUCTURE OF AHRC, THE ARGININE REPRESSOR/ACTIVATOR PROTEIN FROM BACILLUS SUBTILIS
2P5MA:; B:; C:C-TERMINAL DOMAIN HEXAMER OF AHRC BOUND WITH L-ARGININE
(-)
Escherichia coli [TaxId: 562] (3)
1XXAA:; B:; C:; D:; E:; F:C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR/ L-ARGININE COMPLEX; PB DERIVATIVE
1XXBA:; E:; F:; B:; C:; D:C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR/ L-ARGININE COMPLEX
1XXCA:; B:; C:; D:; E:; F:C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR
(-)
Superfamily: GAD domain-like (9)
(-)
Family: GAD domain (8)
(-)
Protein domain: Glutamyl-tRNA(gln) amidotransferase subunit E, GatE, insert domain (2)
(-)
Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
2D6FC:271-395; D:271-395CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN)
(-)
Pyrococcus abyssi [TaxId: 29292] (1)
1ZQ1C:277-407; D:277-407STRUCTURE OF GATDE TRNA-DEPENDENT AMIDOTRANSFERASE FROM PYROCOCCUS ABYSSI
(-)
Protein domain: Prokaryotic AspRS, insert domain (6)
(-)
Escherichia coli [TaxId: 562] (3)
1C0AA:288-420CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE : TRNAASP : ASPARTYL-ADENYLATE COMPLEX
1EQRA:288-420; B:288-420; C:288-420CRYSTAL STRUCTURE OF FREE ASPARTYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI
1IL2A:288-420; B:1288-1420CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE:YEAST TRNAASP:ASPARTYL-ADENYLATE COMPLEX
(-)
Thermus thermophilus, AspRS-1 [TaxId: 274] (3)
1EFWA:295-414; B:295-414CRYSTAL STRUCTURE OF ASPARTYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED TO TRNAASP FROM ESCHERICHIA COLI
1G51A:295-414; B:1295-1414ASPARTYL TRNA SYNTHETASE FROM THERMUS THERMOPHILUS AT 2.4 A RESOLUTION
1L0WA:295-414; B:1295-1414ASPARTYL-TRNA SYNTHETASE-1 FROM SPACE-GROWN CRYSTALS
(-)
Family: PH0730 C-terminal domain-like (1)
(-)
Protein domain: Hypothetical protein PH0730 (1)
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
2P8TA:83-199HYPOTHETICAL PROTEIN PH0730 FROM PYROCOCCUS HORIKOSHII OT3
(-)
Superfamily: PCD-like (11)
(-)
Family: automated matches (2)
(-)
Protein domain: automated matches (2)
(-)
Brucella melitensis [TaxId: 29459] (1)
3JSTA:; B:CRYSTAL STRUCTURE OF TRANSCRIPTIONAL COACTIVATOR/PTERIN DEHYDRATASE FROM BRUCELLA MELITENSIS
(-)
Geobacillus kaustophilus [TaxId: 1462] (1)
2EBBA:CRYSTAL STRUCTURE OF PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE (PTERIN CARBINOLAMINE DEHYDRATASE) FROM GEOBACILLUS KAUSTOPHILUS HTA426
(-)
Family: PCD-like (9)
(-)
Protein domain: automated matches (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
4C45A:CRYSTAL STRUCTURE OF HUMAN PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE 2 (PCBD2)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
3HXAA:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF DCOH1THR51SER
(-)
Protein domain: DcoH-like protein DCoH2 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1RU0A:; B:CRYSTAL STRUCTURE OF DCOH2, A PARALOG OF DCOH, THE DIMERIZATION COFACTOR OF HNF-1
(-)
Protein domain: Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) (6)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (4)
1DCHA:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF DCOH, A BIFUNCTIONAL, PROTEIN-BINDING TRANSCRIPTION COACTIVATOR
1DCOA:; C:; D:; E:; F:; G:; H:; B:DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR
1DCPA:; B:; C:; D:; E:; F:; G:; H:DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, COMPLEXED WITH BIOPTERIN
1F93A:; B:; C:; D:CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE DIMERIZATION DOMAIN OF HNF-1 ALPHA AND THE COACTIVATOR DCOH
(-)
Thermus thermophilus [TaxId: 274] (2)
1USMA:DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, PRO9LEU MUTANT
1USOA:; B:DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, PRO9LEU MUTANT
(-)
Superfamily: PH0987 N-terminal domain-like (1)
(-)
Family: PH0987 N-terminal domain-like (1)
(-)
Protein domain: Uncharacterized protein PH0987 (1)
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
2PHCB:2-85CRYSTAL STRUCTURE OF CONSERVED UNCHARACTERIZED PROTEIN PH0987 FROM PYROCOCCUS HORIKOSHII
(-)
Superfamily: RBP11-like subunits of RNA polymerase (76)
(-)
Family: automated matches (2)
(-)
Protein domain: automated matches (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
4C2MK:; Z:STRUCTURE OF RNA POLYMERASE I AT 2.8 A RESOLUTION
4C3IK:STRUCTURE OF 14-SUBUNIT RNA POLYMERASE I AT 3.0 A RESOLUTION, CRYSTAL FORM C2-100
(-)
Family: RBP11/RpoL (31)
(-)
Protein domain: automated matches (6)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (5)
2NVQK:RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH 2'DUTP
3CQZK:CRYSTAL STRUCTURE OF 10 SUBUNIT RNA POLYMERASE II IN COMPLEX WITH THE INHIBITOR ALPHA-AMANITIN
3M3YK:RNA POLYMERASE II ELONGATION COMPLEX C
3S1MK:RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 1)
3S1NK:RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3RZOK:RNA POLYMERASE II INITIATION COMPLEX WITH A 4-NT RNA
(-)
Protein domain: DNA-directed RNA polymerase subunit L, RpoL (1)
(-)
Thermoplasma acidophilum [TaxId: 2303] (1)
1XPPA:; B:; C:; D:CRYSTAL STRUCTURE OF TA1416,DNA-DIRECTED RNA POLYMERASE SUBUNIT L, FROM THERMOPLASMA ACIDOPHILUM
(-)
Protein domain: RPB11 (24)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (23)
1I3QK:RNA POLYMERASE II CRYSTAL FORM I AT 3.1 A RESOLUTION
1I50K:RNA POLYMERASE II CRYSTAL FORM II AT 2.8 A RESOLUTION
1I6HK:RNA POLYMERASE II ELONGATION COMPLEX
1K83K:CRYSTAL STRUCTURE OF YEAST RNA POLYMERASE II COMPLEXED WITH THE INHIBITOR ALPHA AMANITIN
1TWAK:RNA POLYMERASE II COMPLEXED WITH ATP
1TWCK:RNA POLYMERASE II COMPLEXED WITH GTP
1TWFK:RNA POLYMERASE II COMPLEXED WITH UTP AT 2.3 A RESOLUTION
1TWGK:RNA POLYMERASE II COMPLEXED WITH CTP
1TWHK:RNA POLYMERASE II COMPLEXED WITH 2'DATP
2B63K:1-114COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX
2B8KK:1-11412-SUBUNIT RNA POLYMERASE II
2E2HK:1-114RNA POLYMERASE II ELONGATION COMPLEX AT 5 MM MG2+ WITH GTP
2E2IK:1-114RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DGTP
2E2JK:1-114RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH GMPCPP
2JA5K:1-114CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A
2JA6K:1-114CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B
2JA7K:1-114; W:1-114CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C
2JA8K:1-114CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
2NVTK:1-114RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH GMPCPP
2NVXK:1-114RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DUTP
2NVYK:1-114RNA POLYMERASE II FORM II IN 150 MM MN+2
2NVZK:1-114RNA POLYMERASE II ELONGATION COMPLEX WITH UTP, UPDATED 11/2006
2YU9K:1-114RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH UTP
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3S14K:RNA POLYMERASE II INITIATION COMPLEX WITH A 6-NT RNA
(-)
Family: RNA polymerase alpha subunit dimerisation domain (43)
(-)
Protein domain: RNA polymerase alpha (18)
(-)
Escherichia coli [TaxId: 562] (1)
1BDFA:2-52,A:179-232; B:1-52,B:179-235; C:1-52,C:179-235; D:1-52,D:179-235STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE ALPHA SUBUNIT N-TERMINAL DOMAIN
(-)
Thermus aquaticus [TaxId: 271] (4)
1I6VA:6-49,A:173-229; B:3-49,B:173-232THERMUS AQUATICUS CORE RNA POLYMERASE-RIFAMPICIN COMPLEX
1YNJA:6-49,A:173-231; B:6-49,B:173-228TAQ RNA POLYMERASE-SORANGICIN COMPLEX
1YNNA:6-49,A:173-231; B:6-49,B:173-228TAQ RNA POLYMERASE-RIFAMPICIN COMPLEX
2GHOA:6-49,A:173-231; B:6-49,B:173-228RECOMBINANT THERMUS AQUATICUS RNA POLYMERASE FOR STRUCTURAL STUDIES
(-)
Thermus thermophilus [TaxId: 274] (13)
1IW7A:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE RNA POLYMERASE HOLOENZYME FROM THERMUS THERMOPHILUS AT 2.6A RESOLUTION
1SMYA:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229STRUCTURAL BASIS FOR TRANSCRIPTION REGULATION BY ALARMONE PPGPP
1ZYRA:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH THE ANTIBIOTIC STREPTOLYDIGIN
2A68A:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFABUTIN
2A69A:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFAPENTIN
2A6EA:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME
2A6HA:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC STERPTOLYDIGIN
2BE5A:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH INHIBITOR TAGETITOXIN
2CW0A:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE HOLOENZYME AT 3.3 ANGSTROMS RESOLUTION
2O5IA:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX
3EQLA:1-49,A:173-229; B:1-49,B:173-229; K:1-49,K:173-229; L:1-49,L:173-229CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC MYXOPYRONIN
4G7HA:4-49,A:173-229; B:7-49,B:173-228; K:4-49,K:173-229; L:4-49,L:173-228CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX
4G7OA:4-49,A:173-229; K:4-49,K:173-229; L:4-49,L:173-228; B:7-49,B:173-228CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2 NT OF RNA
(-)
Protein domain: RPB3 (25)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (24)
1I3QC:3-41,C:173-268RNA POLYMERASE II CRYSTAL FORM I AT 3.1 A RESOLUTION
1I50C:3-41,C:173-268RNA POLYMERASE II CRYSTAL FORM II AT 2.8 A RESOLUTION
1I6HC:3-41,C:173-268RNA POLYMERASE II ELONGATION COMPLEX
1K83C:3-41,C:173-268CRYSTAL STRUCTURE OF YEAST RNA POLYMERASE II COMPLEXED WITH THE INHIBITOR ALPHA AMANITIN
1TWAC:3-41,C:173-268RNA POLYMERASE II COMPLEXED WITH ATP
1TWCC:3-41,C:173-268RNA POLYMERASE II COMPLEXED WITH GTP
1TWFC:3-41,C:173-268RNA POLYMERASE II COMPLEXED WITH UTP AT 2.3 A RESOLUTION
1TWGC:3-41,C:173-268RNA POLYMERASE II COMPLEXED WITH CTP
1TWHC:3-41,C:173-268RNA POLYMERASE II COMPLEXED WITH 2'DATP
2B63C:3-37,C:173-268COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX
2B8KC:3-37,C:173-26812-SUBUNIT RNA POLYMERASE II
2E2HC:3-37,C:173-268RNA POLYMERASE II ELONGATION COMPLEX AT 5 MM MG2+ WITH GTP
2E2IC:3-37,C:173-268RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DGTP
2E2JC:3-37,C:173-268RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH GMPCPP
2JA5C:3-37,C:173-268CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A
2JA6C:3-37,C:173-268CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B
2JA7C:3-37,C:173-268; O:3-37,O:173-268CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C
2JA8C:3-37,C:173-268CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
2NVQC:3-41,C:173-268RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH 2'DUTP
2NVTC:3-37,C:173-268RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH GMPCPP
2NVXC:3-37,C:173-268RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DUTP
2NVYC:3-37,C:173-268RNA POLYMERASE II FORM II IN 150 MM MN+2
2NVZC:3-37,C:173-268RNA POLYMERASE II ELONGATION COMPLEX WITH UTP, UPDATED 11/2006
2YU9C:3-37,C:173-268RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH UTP
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3S14C:3-41,C:173-268RNA POLYMERASE II INITIATION COMPLEX WITH A 6-NT RNA