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(-) Description

Title :  CRYSTAL STRUCTURE OF 14-3-3ZETA IN COMPLEX WITH A PEPTIDE DERIVED FROM EXOS
 
Authors :  D. Bier, A. Glas, G. Hahne, T. Grossmann, C. Ottmann
Date :  15 Oct 13  (Deposition) - 19 Feb 14  (Release) - 12 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.25
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  14-3-3, Adaptor Protein, Protein-Protein Interaction, Cross-Link, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Glas, D. Bier, G. Hahne, C. Rademacher, C. Ottmann, T. N. Grossmann
Constrained Peptides With Target-Adapted Cross-Links As Inhibitors Of A Pathogenic Protein-Protein Interaction.
Angew. Chem. Int. Ed. Engl. V. 53 2489 2014
PubMed-ID: 24504455  |  Reference-DOI: 10.1002/ANIE.201310082

(-) Compounds

Molecule 1 - 14-3-3 PROTEIN ZETA/DELTA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PPROEX HTB
    Expression System Strain: ROSETTA(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 1-230
    Gene: NP_001129171.1, YWHAZ
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: PROTEIN KINASE C INHIBITOR PROTEIN 1, KCIP-1
 
Molecule 2 - EXOENZYME S
    Chains: B
    Engineered: YES
    Fragment: PEPTIDE (UNP RESIDUES 420-430)
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric Unit (1, 5)
No.NameCountTypeFull Name
1P6G5Ligand/IonHEXAETHYLENE GLYCOL
Biological Unit 1 (1, 10)
No.NameCountTypeFull Name
1P6G10Ligand/IonHEXAETHYLENE GLYCOL

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:5 , LYS A:9 , MET A:78 , GLU A:81 , THR A:88 , ALA A:201BINDING SITE FOR RESIDUE P6G A 301
2AC2SOFTWARESER A:110 , LYS A:115 , GLY A:135 , ASP A:136 , ILE A:155 , GLU A:159BINDING SITE FOR RESIDUE P6G A 302
3AC3SOFTWARESER A:99 , GLU A:102 , LEU A:119 , LYS A:122 , GLN A:144 , ALA A:148 , GLU A:151BINDING SITE FOR RESIDUE P6G A 303
4AC4SOFTWAREGLU A:17 , TYR A:19 , ASN A:50 , ALA A:54 , SER A:57 , SER A:58 , HOH A:407BINDING SITE FOR RESIDUE P6G A 304
5AC5SOFTWAREGLN A:32 , GLY A:33 , LYS A:103 , PRO A:107 , ASN A:108 , HOH A:452BINDING SITE FOR RESIDUE P6G A 305
6AC6SOFTWAREARG A:41 , ASN A:42 , SER A:45 , VAL A:46 , LYS A:49 , PHE A:117 , LYS A:120 , TYR A:128 , PRO A:165 , GLY A:169 , LEU A:172 , ASN A:173 , ASP A:213 , ILE A:217 , ASN A:224 , HOH A:405 , HOH B:501 , HOH B:502 , HOH B:503 , HOH B:504 , HOH B:505 , HOH B:506 , HOH B:507 , HOH B:508BINDING SITE FOR CHAIN B OF EXOENZYME S

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4N7G)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Glu A:70 -Gly A:71

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4N7G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4N7G)

(-) Exons   (0, 0)

(no "Exon" information available for 4N7G)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n7g A   1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELTLSEESYKDSTLIMQLLRDNLTLWTS 230
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200  ||   211       221         
                                                                                                                                                                                                                                    203|                         
                                                                                                                                                                                                                                     205                         


Chain B from PDB  Type:PROTEIN  Length:11
                                           
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author .hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 4n7g B 420 QGLLDALDLAS 430
                                   429
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4N7G)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4N7G)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4N7G)

(-) Gene Ontology  (31, 31)

Asymmetric Unit(hide GO term definitions)

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    Glu A:70 - Gly A:71   [ RasMol ]  
 
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        1433Z_HUMAN | P63104: 1ib1 1qja 1qjb 2c1j 2c1n 2o02 2wh0 3cu8 3nkx 3rdh 4bg6 4fj3 4hkc 4ihl 4n7y 4n84 4wrq 4zdr 5d2d 5d3f 5ewz 5exa 5j31 5jit 5jiv 5jm4 5nas 5wxn
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        Q93SQ3_PSEAI | Q93SQ3: 4n7y 4n84 5j31

(-) Related Entries Specified in the PDB File

3ch8 3nkx 4iea 4ihl 4n7y 4n84