1RWD - JenaLib

Title :   BACKBONE NMR STRUCTURE OF A MUTANT P. FURIOSUS RUBREDOXIN USING RESIDUAL DIPOLAR COUPLINGS

Authors :   F. Tian, H. Valafar, J. H. Prestegard, Southeast Collaboratory For Structural Genomics (Secsg)

Date :   16 Dec 03 (Deposition) - 23 Dec 03 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A

Keywords :   Nmr, Residual Dipolar Couplings, Structural Genomics, Psi, Protein Structure Initiative, Southeast Collaboratory For Structural Genomics, Secsg, Electron Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. Tian, H. Valafar, J. H. Prestegard
A Dipolar Coupling Based Strategy For Simultaneous Resonance Assignment And Structure Determination Of Protein Backbones
J. Am. Chem. Soc. V. 123 11791 2001
PubMed-ID: 11716736 | Reference-DOI: 10.1021/JA011806H
(for further references see the PDB file header)

Compounds

Molecule 1 - RUBREDOXIN
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PTRC99A
	Expression System Strain	:	NCM533
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	RUB, PF1282
	Mutation	:	YES
	Organism Scientific	:	PYROCOCCUS FURIOSUS
	Organism Taxid	:	2261
	Synonym	:	RD

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

NMR Structure

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:50
 aligned with RUBR_PYRFU | P24297 from UniProtKB/Swiss-Prot  Length:54

    Alignment length:50
                                    11        21        31        41        51
            RUBR_PYRFU    2 AKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEK 51
               SCOP domains d1rwda_ A: Rubredoxin                              SCOP domains
               CATH domains 1rwdA00 A:1-50  [code=2.20.28.10, no name defined] CATH domains
               Pfam domains -Rubredoxin-1rwdA01 A:2-48                      -- Pfam domains
         Sec.struct. author .................hhhhh.....hhhhh.................. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------RUBREDOXIN -------- PROSITE
                 Transcript -------------------------------------------------- Transcript
                  1rwd A  1 AKYVCKICGYIYDEDAGDPDNGVSPGTKFEEIPDDWVCPICGAPKSEFEK 50
                                    10        20        30        40        50

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Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (1, 1)

Gene Ontology (4, 4)

NMR Structure(hide GO term definitions)

Chain A (RUBR_PYRFU | P24297)

molecular function
	GO:0009055	electron transfer activity	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0005506	iron ion binding	Interacting selectively and non-covalently with iron (Fe) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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