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(-) Description

Title :  X-RAY STRUCTURE OF 113CD-SUBSTITUTED PERDEUTERATED PYROCOCCUS FURIOSUS RUBREDOXIN TO 1.02A RESOLUTION AT 295K IN A QUARTZ CAPILLARY
 
Authors :  M. G. Cuypers, E. P. Mitchell
Date :  11 Feb 15  (Deposition) - 02 Mar 16  (Release) - 24 Aug 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.02
Chains :  Asym./Biol. Unit :  A
Keywords :  Electron Transport, Perdeuterated (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. G. Cuypers, S. A. Mason, E. Mossou, M. Haertlein, V. T. Forsyth, E. P. Mitchell
Macromolecular Structure Phasing By Neutron Anomalous Diffraction.
Sci. Rep. V. 6 31487 2016
PubMed-ID: 27511806  |  Reference-DOI: 10.1038/SREP31487

(-) Compounds

Molecule 1 - RUBREDOXIN
    ChainsA
    Organism ScientificPYROCOCCUS FURIOSUS
    Organism Taxid2261
    Other DetailsPERDEUTERATED, 113-CD SUBSTITUTED, CARBOXYLIC DEUTERONS

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1CD1Ligand/IonCADMIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:5 , CYS A:8 , CYS A:38 , CYS A:41BINDING SITE FOR RESIDUE CD A1054

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5AI3)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:54
                                                                                     
               SCOP domains ------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee.....eee.....hhhh.....hhhhh...............eee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------ Transcript
                  5ai3 A  0 MAKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED 53
                                     9        19        29        39        49    

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5AI3)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5AI3)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RUBR_PYRFU | P242971bq8 1bq9 1brf 1caa 1cad 1iu5 1iu6 1qcv 1rwd 1vcx 1zrp 2pvx 3kyu 3kyv 3kyw 3kyx 3kyy 3ryg 3rz6 3rzt 3ss2 4ar3 4ar4 4ar5 4ar6 4k9f 5ai2 5nw3

(-) Related Entries Specified in the PDB File

5ai2 ANOMALOUS NEUTRON PHASED CRYSTAL STRUCTURE OF 113CD- SUBSTITUTED PERDEUTERATED PYROCOCCUS FURIOSUS RUBREDOXIN TO 1.75A RESOLUTION AT 295K