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(-) Description

Title :  FGFR1 KINASE DOMAIN COMPLEX WITH FRAGMENT 2,2-DIMETHYL-2,3-DIHYDROBENZOFURAN-7-CARBOXAMIDE
 
Authors :  W. -K. Paik, C. J. Squire
Date :  05 Feb 17  (Deposition) - 22 Feb 17  (Release) - 22 Feb 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Kinase, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. -K. Paik, Y. Yosaatmadja, I. Leung, C. J. Squire
Fragment Screening Diverse Active Sites
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - FIBROBLAST GROWTH FACTOR RECEPTOR 1
    Chains: A, B
    EC Number: 2.7.10.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 457-763
    Gene: FGFR1, BFGFR, CEK, FGFBR, FLG, FLT2, HBGFR
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: FGFR-1,BASIC FIBROBLAST GROWTH FACTOR RECEPTOR 1,BFGF-R-1, FMS-LIKE TYROSINE KINASE 2,FLT-2,N-SAM,PROTO-ONCOGENE C-FGR

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1WP12Ligand/Ion2,2-DIMETHYL-2,3-DIHYDRO-1-BENZOFURAN-7-CARBOXAMIDE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1WP11Ligand/Ion2,2-DIMETHYL-2,3-DIHYDRO-1-BENZOFURAN-7-CARBOXAMIDE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1WP11Ligand/Ion2,2-DIMETHYL-2,3-DIHYDRO-1-BENZOFURAN-7-CARBOXAMIDE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:484 , ALA A:512 , GLU A:562 , TYR A:563 , ALA A:564 , LEU A:630 , ASP A:641binding site for residue WP1 A 801
2AC2SOFTWAREGLU B:562 , TYR B:563 , ALA B:564 , ASP B:641binding site for residue WP1 B 801

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5UQ0)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5UQ0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5UQ0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5UQ0)

(-) Exons   (0, 0)

(no "Exon" information available for 5UQ0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:266
                                                                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhh.eeeeeeee...eeeeeeee.......eeeeeeee.....hhhhhhhhhhhhhhhhhhh.......eeeee......eeee.....eehhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee.....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.........hhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uq0 A 464 ELPEDPRWELPRDRLVLGKPLGEFGQVVLAEAIGLDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 765
                                   473       483  ||   495      |507       517       527       537       547       557       567       577||     601       611       621       631       641  ||   668       678       688       698       709       719       729       739       749       759      
                                                486|          502|                                                                      578|                                                644|                                         706|                                                         
                                                 489           505                                                                       593                                                 662                                          708                                                         


Chain B from PDB  Type:PROTEIN  Length:256
                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhh.eeeeeeee..eeeeeeee...eeeeeeee.....hhhhhhhhhhhhhhhhhhh.......eeeee......eeee......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee.....hhhhhhhhhhh...hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh..........hhhhhhhhhhhh........hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uq0 B 463 YELPEDPRWELPRDRLVLGKPLGEGQVVLAEAIGLRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLLPVKWMAPEALRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 762
                                   472       482   ||  495    || 511       521       531       541       551       561       571     ||597       607       617       627       637      |664       676       686       696       706       716       726       736       746       756      
                                                 486|       500|                                                                   577|                                               644|       672|                                                                                       
                                                  490        507                                                                    594                                                662        675
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5UQ0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5UQ0)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5UQ0)

(-) Gene Ontology  (99, 99)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FGFR1_HUMAN | P11362: 1agw 1cvs 1evt 1fgi 1fgk 1fq9 1xr0 2cr3 2fgi 3c4f 3dpk 3gqi 3gql 3js2 3krj 3krl 3kxx 3ky2 3ojv 3rhx 3tt0 4f63 4f64 4f65 4nk9 4nka 4nks 4rwi 4rwj 4rwk 4rwl 4uwb 4uwc 4uwy 4v01 4v04 4v05 4wun 4zsa 5a46 5a4c 5am6 5am7 5b7v 5ew8 5flf 5ur1 5vnd

(-) Related Entries Specified in the PDB File

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