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(-) Description

Title :  CRYO-ET SUBTOMOGRAM AVERAGING OF BG505 SOSIP.664 IN COMPLEX WITH SCD4, 17B, AND 8ANC195
 
Authors :  L. Scharf, H. Wang, H. Gao, S. Chen, A. Mcdowall, P. Bjorkman
Date :  15 Jul 15  (Deposition) - 05 Aug 15  (Release) - 15 Feb 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  23.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Keywords :  Viral Protein-Immune System Complex, Virus (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Scharf, H. Wang, H. Gao, S. Chen, A. W. Mcdowall, P. J. Bjorkman
Broadly Neutralizing Antibody 8Anc195 Recognizes Closed And Open States Of Hiv-1 Env.
Cell V. 162 1379 2015
PubMed-ID: 26359989  |  Reference-DOI: 10.1016/J.CELL.2015.08.035

(-) Compounds

Molecule 1 - HIV-1 GP120
    Chains: A, G, M
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Organism Common: HIV-1
    Organism Scientific: HUMAN IMMUNODEFICIENCY VIRUS 1
    Organism Taxid: 11676
 
Molecule 2 - T-CELL SURFACE GLYCOPROTEIN CD4
    Chains: B, H, N
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Fragment: SOLUBLE CD4 D1-D2 DOMAINS, RESIDUES26-208
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: T-CELL SURFACE ANTIGEN T4/LEU-3, CD4
 
Molecule 3 - FAB OF BROADLY NEUTRALIZING ANTIBODY 17B
    Chains: C, I, O
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 4 - FAB OF BROADLY NEUTRALIZING ANTIBODY 17B
    Chains: D, J, P
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 5 - FAB OF BROADLY NEUTRALIZING ANTIBODY 8ANC195 VARIANT G52K5
    Chains: E, K, Q
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 6 - FAB OF BROADLY NEUTRALIZING ANTIBODY 8ANC195 VARIANT G52K5
    Chains: F, L, R
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  123456789101112131415161718
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 45)

Asymmetric/Biological Unit (1, 45)
No.NameCountTypeFull Name
1NAG45Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (45, 45)

Asymmetric Unit (45, 45)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:88Binding site for Mono-Saccharide NAG A 588 bound to ASN A 88
02AC2SOFTWARELEU A:125 , ASN A:197Binding site for Mono-Saccharide NAG A 697 bound to ASN A 197
03AC3SOFTWAREASN A:234 , THR A:236 , GLN A:352 , VAL F:27 , THR F:29 , PHE F:30 , GLY F:31 , LEU F:32 , TYR F:33 , TRP F:55 , VAL F:72 , ASP F:73 , LEU F:74 , PRO F:77CBinding site for Mono-Saccharide NAG A 734 bound to ASN A 234
04AC4SOFTWARELEU A:86 , ASN A:241Binding site for Mono-Saccharide NAG A 741 bound to ASN A 241
05AC5SOFTWAREASN A:262 , ASN A:377 , CYS A:445 , SER A:446 , SER A:447Binding site for Mono-Saccharide NAG A 762 bound to ASN A 262
06AC6SOFTWAREASN A:276 , THR A:278 , ASN A:279 , GLN F:1 , ILE F:2 , HIS F:3 , TYR F:25 , GLY F:26 , VAL F:27Binding site for Mono-Saccharide NAG A 776 bound to ASN A 276
07AC7SOFTWAREGLU A:268 , GLU A:269 , ILE A:270 , ASN A:289 , GLN A:344Binding site for Mono-Saccharide NAG A 789 bound to ASN A 289
08AC8SOFTWAREASN A:295 , ARG A:444 , SER A:446Binding site for Mono-Saccharide NAG A 795 bound to ASN A 295
09AC9SOFTWAREASN A:356Binding site for Mono-Saccharide NAG A 856 bound to ASN A 356
10BC1SOFTWAREASN A:386 , GLN A:389Binding site for Mono-Saccharide NAG A 886 bound to ASN A 386
11BC2SOFTWARETHR A:392 , ASN A:394 , LYS A:398 , LEU A:407Binding site for Mono-Saccharide NAG A 894 bound to ASN A 394
12BC3SOFTWAREASN A:408 , GLY A:411 , ARG A:412Binding site for Mono-Saccharide NAG A 908 bound to ASN A 408
13BC4SOFTWAREVAL A:293 , SER A:446 , ASN A:448Binding site for Mono-Saccharide NAG A 948 bound to ASN A 448
14BC5SOFTWAREASN A:463Binding site for Mono-Saccharide NAG A 963 bound to ASN A 463
15BC6SOFTWAREASN F:82BBinding site for Mono-Saccharide NAG F1000 bound to ASN F 82B
16BC7SOFTWAREASN G:88 , TRP L:52Binding site for Mono-Saccharide NAG G 588 bound to ASN G 88
17BC8SOFTWARELEU G:125 , ASN G:197Binding site for Mono-Saccharide NAG G 697 bound to ASN G 197
18BC9SOFTWAREASN G:234 , THR G:236 , GLN G:352 , LYS L:23 , ALA L:24 , TYR L:25 , VAL L:27 , PHE L:30 , VAL L:72 , LEU L:74 , SER L:77A , PRO L:77B , PRO L:77C , ILE L:77DBinding site for Mono-Saccharide NAG G 734 bound to ASN G 234
19CC1SOFTWARELEU G:86 , ASN G:241Binding site for Mono-Saccharide NAG G 741 bound to ASN G 241
20CC2SOFTWAREASN G:262 , ASN G:377 , CYS G:445 , SER G:446 , SER G:447Binding site for Mono-Saccharide NAG G 762 bound to ASN G 262
21CC3SOFTWAREASN G:276 , THR G:278 , ASN G:279 , HIS L:3 , TYR L:25Binding site for Mono-Saccharide NAG G 776 bound to ASN G 276
22CC4SOFTWAREGLU G:268 , GLU G:269 , ILE G:270 , ASN G:289 , GLN G:344Binding site for Mono-Saccharide NAG G 789 bound to ASN G 289
23CC5SOFTWAREASN G:295 , ARG G:444 , SER G:446Binding site for Mono-Saccharide NAG G 795 bound to ASN G 295
24CC6SOFTWAREASN G:356Binding site for Mono-Saccharide NAG G 856 bound to ASN G 356
25CC7SOFTWAREASN G:386 , GLN G:389Binding site for Mono-Saccharide NAG G 886 bound to ASN G 386
26CC8SOFTWARETHR G:392 , ASN G:394 , LYS G:398 , LEU G:407Binding site for Mono-Saccharide NAG G 894 bound to ASN G 394
27CC9SOFTWAREASN G:408 , GLY G:411 , ARG G:412Binding site for Mono-Saccharide NAG G 908 bound to ASN G 408
28DC1SOFTWAREVAL G:293 , SER G:446 , ASN G:448Binding site for Mono-Saccharide NAG G 948 bound to ASN G 448
29DC2SOFTWAREASN G:463Binding site for Mono-Saccharide NAG G 963 bound to ASN G 463
30DC3SOFTWAREASN L:82BBinding site for Mono-Saccharide NAG L1000 bound to ASN L 82B
31DC4SOFTWAREASN M:88 , TYR Q:94 , GLN R:50 , TRP R:52 , LYS R:56 , SER R:58Binding site for Mono-Saccharide NAG M 588 bound to ASN M 88
32DC5SOFTWARELEU M:125 , ASN M:197Binding site for Mono-Saccharide NAG M 697 bound to ASN M 197
33DC6SOFTWAREASN M:234 , THR M:236 , GLN M:352 , SER R:21 , CYS R:22 , LYS R:23 , SER R:70 , PRO R:77C , ILE R:77D , SER R:78 , SER R:79Binding site for Mono-Saccharide NAG M 734 bound to ASN M 234
34DC7SOFTWARELEU M:86 , ASN M:241 , LYS R:56Binding site for Mono-Saccharide NAG M 741 bound to ASN M 241
35DC8SOFTWAREASN M:262 , ASN M:377 , CYS M:445 , SER M:446 , SER M:447Binding site for Mono-Saccharide NAG M 762 bound to ASN M 262
36DC9SOFTWAREASN M:276 , THR M:278 , ASN M:279 , TYR R:25Binding site for Mono-Saccharide NAG M 776 bound to ASN M 276
37EC1SOFTWAREGLU M:268 , GLU M:269 , ILE M:270 , ASN M:289 , GLN M:344Binding site for Mono-Saccharide NAG M 789 bound to ASN M 289
38EC2SOFTWAREASN M:295 , ARG M:444 , SER M:446Binding site for Mono-Saccharide NAG M 795 bound to ASN M 295
39EC3SOFTWAREASN M:356Binding site for Mono-Saccharide NAG M 856 bound to ASN M 356
40EC4SOFTWAREASN M:386 , GLN M:389Binding site for Mono-Saccharide NAG M 886 bound to ASN M 386
41EC5SOFTWARETHR M:392 , ASN M:394 , LYS M:398 , LEU M:407Binding site for Mono-Saccharide NAG M 894 bound to ASN M 394
42EC6SOFTWAREASN M:408 , GLY M:411 , ARG M:412Binding site for Mono-Saccharide NAG M 908 bound to ASN M 408
43EC7SOFTWAREVAL M:293 , SER M:446 , ASN M:448Binding site for Mono-Saccharide NAG M 948 bound to ASN M 448
44EC8SOFTWAREASN M:463Binding site for Mono-Saccharide NAG M 963 bound to ASN M 463
45EC9SOFTWAREASN R:82BBinding site for Mono-Saccharide NAG R1000 bound to ASN R 82B

(-) SS Bonds  (54, 54)

Asymmetric/Biological Unit
No.Residues
1A:119 -A:205
2A:126 -A:196
3A:218 -A:247
4A:228 -A:239
5A:296 -A:331
6A:331 -A:385
7A:378 -A:445
8A:385 -A:418
9B:16 -B:84
10B:130 -B:159
11C:23 -C:88
12C:134 -C:194
13D:22 -D:92
14D:140 -D:196
15E:23 -E:88
16E:134 -E:194
17F:22 -F:92
18F:140 -F:196
19G:119 -G:205
20G:126 -G:196
21G:218 -G:247
22G:228 -G:239
23G:296 -G:331
24G:331 -G:385
25G:378 -G:445
26G:385 -G:418
27H:16 -H:84
28H:130 -H:159
29I:23 -I:88
30I:134 -I:194
31J:22 -J:92
32J:140 -J:196
33K:23 -K:88
34K:134 -K:194
35L:22 -L:92
36L:140 -L:196
37M:119 -M:205
38M:126 -M:196
39M:218 -M:247
40M:228 -M:239
41M:296 -M:331
42M:331 -M:385
43M:378 -M:445
44M:385 -M:418
45N:16 -N:84
46N:130 -N:159
47O:23 -O:88
48O:134 -O:194
49P:22 -P:92
50P:140 -P:196
51Q:23 -Q:88
52Q:134 -Q:194
53R:22 -R:92
54R:140 -R:196

(-) Cis Peptide Bonds  (27, 27)

Asymmetric/Biological Unit
No.Residues
1Trp C:94 -Pro C:95
2Tyr C:140 -Pro C:141
3Phe D:146 -Pro D:147
4Glu D:148 -Pro D:149
5Ser E:7 -Pro E:8
6Tyr E:94 -Pro E:95
7Tyr E:140 -Pro E:141
8Phe F:146 -Pro F:147
9Glu F:148 -Pro F:149
10Trp I:94 -Pro I:95
11Tyr I:140 -Pro I:141
12Phe J:146 -Pro J:147
13Glu J:148 -Pro J:149
14Ser K:7 -Pro K:8
15Tyr K:94 -Pro K:95
16Tyr K:140 -Pro K:141
17Phe L:146 -Pro L:147
18Glu L:148 -Pro L:149
19Trp O:94 -Pro O:95
20Tyr O:140 -Pro O:141
21Phe P:146 -Pro P:147
22Glu P:148 -Pro P:149
23Ser Q:7 -Pro Q:8
24Tyr Q:94 -Pro Q:95
25Tyr Q:140 -Pro Q:141
26Phe R:146 -Pro R:147
27Glu R:148 -Pro R:149

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5A8H)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5A8H)

(-) Exons   (0, 0)

(no "Exon" information available for 5A8H)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:306
                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....ee.hhhhhhhhhhhhhhhhhh........eeeeeee.....eeeeee.............eeee....eeeee..........ee...eee.eeeee.......eee.........eee..........eeeeeeeeeeeeee...eeeeehhhhhhhhhhhhhhhhhhhh...eeee......hhhhhheeeee..eeeee.......ee..........eeeeeeeee.eee......eee.........eeeeeeeeeee..........eeee.....hhhhhhhhhhh.eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5a8h A   86 LENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE  492
                                    95       105       115       125   ||  199       209       219       229       239       249       259       269       279       289       299|      338       348       358       368       378       388       398|      416       426       436       446       456       466       476       486      
                                                                     129|                                                                                                      299|                                                                  398|                                                                                     
                                                                      194                                                                                                       329                                                                   407                                                                                     


Chain B from PDB  Type:PROTEIN  Length:181
                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....ee............eeee.....eeeeee..eeee....hhh.ee.hhhhhh......ee...hhhhheeeeeee..ee..eeeeeeeeee...........eeeeee.......eee.........ee..eeee.........ee...eee..eee...ee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h B    1 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK  181
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180 


Chain C from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee...eeee.....eeeeeee.......eeeeee.......eeee...ee.......eeeee...eeeeee...hhhhheeeeeee........ee....eeee.......eeeee..hhhhhhhh.eeeeeeeeee....eeeeeee......................eeeeeeeee.........eeeeeeee......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h C    1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG  212
                                    10        20        30        40        50        60        70        80        90     || 98       108       118       128       138       148       158       168       178       188       198       208    
                                                                                                                         95A|                                                                                                                     
                                                                                                                          95B                                                                                                                     


Chain D from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee....eeeeeeeee..hhh.eeeeeeee......eeeeee.hhhh.eee.hhhh..eeeeee....eeeeeee.......eeeeeeeee..hhhhh.........ee...eeeee...........ee..........eeeeee..........eeee.hhh.......eeeee.....eeeeeeeeee.hhh....eeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h D    1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK  214
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F|||||  105       115       125       135       145       155       165       175       185       195       205         
                                                                              52A                            82A||               100A|||||100J|                                                                                                                  
                                                                                                              82B|                100B|||||100K                                                                                                                  
                                                                                                               82C                 100C||||||                                                                                                                    
                                                                                                                                    100D|||||                                                                                                                    
                                                                                                                                     100E||||                                                                                                                    
                                                                                                                                      100F|||                                                                                                                    
                                                                                                                                       100G||                                                                                                                    
                                                                                                                                        100H|                                                                                                                    
                                                                                                                                         100I                                                                                                                    


Chain E from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h E    1 DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE  213
                                    10        20        30|       39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209    
                                                        30A                                                                                                                                                                                       


Chain F from PDB  Type:PROTEIN  Length:224
                                                                                                                                                                                                                                                                 
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeeee.....eeeeeeee..eeee.hhhh..eeeeee........eeeeee...hhhhheeeeeeeee........ee..ee...ee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeehhhhhhh...eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h F    1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  213
                                    10        20        30     |  39        49  ||    60        70       77C|     ||83        93      100C|||||||101       111       121    || 139       149       159       169       179       189       199       209    
                                                             35A               52|                     77A|||   82A||               100A|||||100J||                       126|                                                                              
                                                                                54                      77B||    82B|                100B|||||100K|                        135                                                                              
                                                                                                         77C|     82C                 100C|||||100L                                                                                                         
                                                                                                          77D                          100D|||||                                                                                                            
                                                                                                                                        100E||||                                                                                                            
                                                                                                                                         100F|||                                                                                                            
                                                                                                                                          100G||                                                                                                            
                                                                                                                                           100H|                                                                                                            
                                                                                                                                            100I                                                                                                            


Chain G from PDB  Type:PROTEIN  Length:306
                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee...hhhhhhhhhhhhhh........eeeeeee.....eeeeee.............eeee....eeeee........eeee...eee.eeeee.......eee.........eee..........eeeeeeeeeeeeee...eeeeehhhhhhhhhhhhhhhhhhhh...eeee......hhhhhheeeee..eeeee.......ee..........eeeeeeeee.eee......eee.........eeeeeeeeeee..........eeee.....hhhhhhhhhhh.eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5a8h G   86 LENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE  492
                                    95       105       115       125   ||  199       209       219       229       239       249       259       269       279       289       299|      338       348       358       368       378       388       398|      416       426       436       446       456       466       476       486      
                                                                     129|                                                                                                      299|                                                                  398|                                                                                     
                                                                      194                                                                                                       329                                                                   407                                                                                     


Chain H from PDB  Type:PROTEIN  Length:181
                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....ee............eeee.....eeeeee..eeee....hhh.ee.hhhhhh......ee...hhhhheeeeeee..ee..eeeeeeeeee...........eeeeee.......eee.........ee..eeee.........ee...eee..eee...ee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h H    1 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK  181
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180 


Chain I from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee...eeee.....eeeeeee.......eeeeee.......eeee...ee.......eeeee...eeeeee...hhhhheeeeeee........ee....eeee.......eeeee..hhhhhhhh.eeeeeeeeee....eeeeeee......................eeeeeeeee.........eeeeeeee......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h I    1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG  212
                                    10        20        30        40        50        60        70        80        90     || 98       108       118       128       138       148       158       168       178       188       198       208    
                                                                                                                         95A|                                                                                                                     
                                                                                                                          95B                                                                                                                     


Chain J from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee....eeeeeeeee..hhh.eeeeeeee......eeeeee.hhhh.eee.hhhh..eeeeee....eeeeeee.......eeeeeeeee..hhhhh.........ee...eeeee...........ee..........eeeeee..........eeee.hhh.......eeeee.....eeeeeeeeee.hhh....eeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h J    1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK  214
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F|||||  105       115       125       135       145       155       165       175       185       195       205         
                                                                              52A                            82A||               100A|||||100J|                                                                                                                  
                                                                                                              82B|                100B|||||100K                                                                                                                  
                                                                                                               82C                 100C||||||                                                                                                                    
                                                                                                                                    100D|||||                                                                                                                    
                                                                                                                                     100E||||                                                                                                                    
                                                                                                                                      100F|||                                                                                                                    
                                                                                                                                       100G||                                                                                                                    
                                                                                                                                        100H|                                                                                                                    
                                                                                                                                         100I                                                                                                                    


Chain K from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h K    1 DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE  213
                                    10        20        30|       39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209    
                                                        30A                                                                                                                                                                                       


Chain L from PDB  Type:PROTEIN  Length:224
                                                                                                                                                                                                                                                                 
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeeee.....eeeeeeee..eeee.hhhh..eeeeee........eeeeee...hhhhheeeeeeeee........ee..ee...ee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeehhhhhhh...eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h L    1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  213
                                    10        20        30     |  39        49  ||    60        70       77C|     ||83        93      100C|||||||101       111       121    || 139       149       159       169       179       189       199       209    
                                                             35A               52|                     77A|||   82A||               100A|||||100J||                       126|                                                                              
                                                                                54                      77B||    82B|                100B|||||100K|                        135                                                                              
                                                                                                         77C|     82C                 100C|||||100L                                                                                                         
                                                                                                          77D                          100D|||||                                                                                                            
                                                                                                                                        100E||||                                                                                                            
                                                                                                                                         100F|||                                                                                                            
                                                                                                                                          100G||                                                                                                            
                                                                                                                                           100H|                                                                                                            
                                                                                                                                            100I                                                                                                            


Chain M from PDB  Type:PROTEIN  Length:306
                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee...hhhhhhhhhhhhhh........eeeeeee.....eeeeee.............eeee....eeeee........eeee...eee.eeeee.......eee.........eee..........eeeeeeeeeeeeee...eeeeehhhhhhhhhhhhhhhhhhhh...eeee......hhhhhheeeee..eeeee.......ee..........eeeeeeeee.eee......eee.........eeeeeeeeeee..........eeee.....hhhhhhhhhhh.eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5a8h M   86 LENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE  492
                                    95       105       115       125   ||  199       209       219       229       239       249       259       269       279       289       299|      338       348       358       368       378       388       398|      416       426       436       446       456       466       476       486      
                                                                     129|                                                                                                      299|                                                                  398|                                                                                     
                                                                      194                                                                                                       329                                                                   407                                                                                     


Chain N from PDB  Type:PROTEIN  Length:181
                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....ee............eeee.....eeeeee..eeee....hhh.ee.hhhhhh......ee...hhhhheeeeeee..ee..eeeeeeeeee...........eeeeee.......eee.........ee..eeee.........ee...eee..eee...ee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h N    1 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK  181
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180 


Chain O from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee...eeee.....eeeeeee.......eeeeee.......eeee...ee.......eeeee...eeeeee...hhhhheeeeeee........ee....eeee.......eeeee..hhhhhhhh.eeeeeeeeee....eeeeeee......................eeeeeeeee.........eeeeeeee......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h O    1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG  212
                                    10        20        30        40        50        60        70        80        90     || 98       108       118       128       138       148       158       168       178       188       198       208    
                                                                                                                         95A|                                                                                                                     
                                                                                                                          95B                                                                                                                     


Chain P from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee....eeeeeeeee..hhh.eeeeeeee......eeeeee.hhhh.eee.hhhh..eeeeee....eeeeeee.......eeeeeeeee..hhhhh.........ee...eeeee...........ee..........eeeeee..........eeee.hhh.......eeeee.....eeeeeeeeee.hhh....eeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h P    1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK  214
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F|||||  105       115       125       135       145       155       165       175       185       195       205         
                                                                              52A                            82A||               100A|||||100J|                                                                                                                  
                                                                                                              82B|                100B|||||100K                                                                                                                  
                                                                                                               82C                 100C||||||                                                                                                                    
                                                                                                                                    100D|||||                                                                                                                    
                                                                                                                                     100E||||                                                                                                                    
                                                                                                                                      100F|||                                                                                                                    
                                                                                                                                       100G||                                                                                                                    
                                                                                                                                        100H|                                                                                                                    
                                                                                                                                         100I                                                                                                                    


Chain Q from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h Q    1 DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE  213
                                    10        20        30|       39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209    
                                                        30A                                                                                                                                                                                       


Chain R from PDB  Type:PROTEIN  Length:224
                                                                                                                                                                                                                                                                 
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeeee.....eeeeeeee..eeee.hhhh..eeeeee........eeeeee...hhhhheeeeeeeee........ee..ee...ee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeehhhhhhh...eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a8h R    1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  213
                                    10        20        30     |  39        49  ||    60        70       77C|     ||83        93      100C|||||||101       111       121    || 139       149       159       169       179       189       199       209    
                                                             35A               52|                     77A|||   82A||               100A|||||100J||                       126|                                                                              
                                                                                54                      77B||    82B|                100B|||||100K|                        135                                                                              
                                                                                                         77C|     82C                 100C|||||100L                                                                                                         
                                                                                                          77D                          100D|||||                                                                                                            
                                                                                                                                        100E||||                                                                                                            
                                                                                                                                         100F|||                                                                                                            
                                                                                                                                          100G||                                                                                                            
                                                                                                                                           100H|                                                                                                            
                                                                                                                                            100I
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5A8H)

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(no "CATH Domain" information available for 5A8H)

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(no "Pfam Domain" information available for 5A8H)

(-) Gene Ontology  (72, 76)

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Access by UniProt ID/Accession number
  CD4_HUMAN | P01730
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ENV_HV1Y2 | P35961
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CD4_HUMAN | P01730: 1cdh 1cdi 1cdj 1cdu 1cdy 1g9m 1g9n 1gc1 1jl4 1opn 1opt 1opw 1q68 1rzj 1rzk 1wbr 1wio 1wip 1wiq 2b4c 2jkr 2jkt 2klu 2nxy 2nxz 2ny0 2ny1 2ny2 2ny3 2ny4 2ny5 2ny6 2qad 3b71 3cd4 3j70 3jcb 3jcc 3jwd 3jwo 3lqa 3o2d 3s4s 3s5l 3t0e 4h8w 4jm2 4p9h 4q6i 4r2g 4r4h 4rqs 5a7x 5cay 5thr 5u1f 5vn3
        ENV_HV1Y2 | P35961: 1g9n 1rzk 1yyl 1yym 2i5y 2i60 2ny7 2qad 3hi1 3tgq 4dvr 4jo3 4jzw 4jzz 4k0a 4ka2 4laj 4r4f 4rqs 4rwy 5a7x

(-) Related Entries Specified in the PDB File

5a7x NEGATIVE STAIN EM OF BG505 SOSIP.664 IN COMPLEX WITH SCD4, 17B, AND 8ANC195 RELATED ID: EMD-3096 RELATED DB: EMDB