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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (5, 22)
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Asymmetric Unit (16, 16)
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Asymmetric Unit
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Asymmetric Unit
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(no "SAP(SNP)/Variant" information available for 1YYL) |
(no "PROSITE Motif" information available for 1YYL) |
(no "Exon" information available for 1YYL) |
Asymmetric UnitChain G from PDB Type:PROTEIN Length:301 aligned with ENV_HV1Y2 | P35961 from UniProtKB/Swiss-Prot Length:843 Alignment length:398 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 ENV_HV1Y2 82 EVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDLRNATNTTSSSWETMEKGEIKNCSFNITTSIRDKVQKEYALFYNLDVVPIDNASYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNNTRKSINIGPGRALYTTGEIIGDIRQAHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 479 SCOP domains d1yylg_ G: automated matches SCOP domains CATH domains 1yylG00 G:83-492 HIV Envelope Protein Gp120; Ch ain G CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1yyl G 83 EVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGA-------------------------------------------------------------GSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGA----------------------------GHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWND--------RNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 492 92 102 112 122 | - - - - - - 195 205 215 225 235 245 255 265 275 285 295 | - - - | 336 346 356 366 376 386 |- 414 424 434 444 454 464 474 484 129 194 299 329 395 412 Chain H from PDB Type:PROTEIN Length:229 SCOP domains d1yylh1 H:1-113 Immunoglobulin heavy chain variable domain, VH d1yylh2 H:114-214 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains CATH domains 1yylH01 H:1-113 Immunoglobulins 1yylH02 H:114-213 Immunoglobulins - CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1yyl H 1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 214 10 20 30 40 50 | 59 69 79 ||| 86 96 ||100F||||| 105 115 125 135 145 155 165 175 185 195 205 52A 82A|| 100A|||||100J| 82B| 100B|||||100K 82C 100C|||||| 100D||||| 100E|||| 100F||| 100G|| 100H| 100I Chain L from PDB Type:PROTEIN Length:214 SCOP domains d1yyll1 L:1-107 Immunoglobulin light chain kappa variable domain, VL-kappa d1yyll2 L:108-212 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains CATH domains 1yylL01 L:1-108 Immunoglobulins 1yylL02 L:109-211 Immunoglobulins - CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1yyl L 1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG 212 10 20 30 40 50 60 70 80 90 || 98 108 118 128 138 148 158 168 178 188 198 208 95A| 95B Chain M from PDB Type:PROTEIN Length:27 SCOP domains -d1yylm1 M:2-27 SCOP domains CATH domains --------------------------- CATH domains Pfam domains --------------------------- Pfam domains SAPs(SNPs) --------------------------- SAPs(SNPs) PROSITE --------------------------- PROSITE Transcript --------------------------- Transcript 1yyl M 1 xNLHFCQLRCKSLGLLGKCAGSfCACx 27 | 10 20 | | 1-MPT 23-BIF 27-VLM Chain P from PDB Type:PROTEIN Length:301 aligned with ENV_HV1Y2 | P35961 from UniProtKB/Swiss-Prot Length:843 Alignment length:398 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 ENV_HV1Y2 82 EVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDLRNATNTTSSSWETMEKGEIKNCSFNITTSIRDKVQKEYALFYNLDVVPIDNASYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNNNTRKSINIGPGRALYTTGEIIGDIRQAHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 479 SCOP domains d1yylp_ P: automated matches SCOP domains CATH domains 1yylP00 P:1083-1492 HIV Envelope Protein Gp120; Chain G CATH domains Pfam domains (1) GP120-1yylP01 P:1083-1492 Pfam domains (1) Pfam domains (2) GP120-1yylP02 P:1083-1492 Pfam domains (2) SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1yyl P 1083 EVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGA-------------------------------------------------------------GSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGA----------------------------GHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWND--------RNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE 1492 1092 1102 1112 1122 | - - - - - - 1195 1205 1215 1225 1235 1245 1255 1265 1275 1285 1295 | - - - | 1336 1346 1356 1366 1376 1386 |- 1414 1424 1434 1444 1454 1464 1474 1484 1129 1194 1299 1329 1395 1412 Chain Q from PDB Type:PROTEIN Length:214 SCOP domains d1yylq1 Q:1001-1107 Immunoglobulin light chain kappa variable domain, VL-kappa d1yylq2 Q:1108-1212 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains CATH domains 1yylQ01 Q:1001-1108 Immunoglobulins 1yylQ02 Q:1109-1211 Immunoglobulins - CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1yyl Q 1001 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG 1212 1010 1020 1030 1040 1050 1060 1070 1080 1090 |1098 1108 1118 1128 1138 1148 1158 1168 1178 1188 1198 1208 1095A| 1095B Chain R from PDB Type:PROTEIN Length:229 SCOP domains d1yylr1 R:1001-1113 Immunoglobulin heavy chain variable domain, VH d1yylr2 R:1114-1214 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains CATH domains 1yylR01 R:1001-1113 Immunoglobulins 1yylR02 R:1114-1213 Immunoglobulins - CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1yyl R 1001 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 1214 1010 1020 1030 1040 1050 | 1059 1069 1079 |||1086 1096 |1100F||||| 1105 1115 1125 1135 1145 1155 1165 1175 1185 1195 1205 1052A 1082A|| 1100A||||1100J| 1082B| 1100B||||1100K 1082C 1100C|||||| 1100D||||| 1100E|||| 1100F||| 1100G|| 1100H| 1100I Chain S from PDB Type:PROTEIN Length:27 SCOP domains -d1yyls1 S:1002-1027 SCOP domains CATH domains --------------------------- CATH domains Pfam domains --------------------------- Pfam domains SAPs(SNPs) --------------------------- SAPs(SNPs) PROSITE --------------------------- PROSITE Transcript --------------------------- Transcript 1yyl S 1001 xNLHFCQLRCKSLGLLGKCAGSfCACx 1027 | 1010 1020 | | 1001-MPT 1023-BIF 1027-VLM
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit(hide GO term definitions) Chain G,P (ENV_HV1Y2 | P35961)
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