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(-) Description

Title :  NEGATIVE STAIN EM OF BG505 SOSIP.664 IN COMPLEX WITH SCD4, 17B, AND 8ANC195
 
Authors :  L. Scharf, H. Wang, H. Gao, S. Chen, A. Mcdowall, P. Bjorkman
Date :  10 Jul 15  (Deposition) - 05 Aug 15  (Release) - 10 Aug 16  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  17.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Keywords :  Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Scharf, H. Wang, H. Gao, S. Chen, A. W. Mcdowall, P. J. Bjorkman
Broadly Neutralizing Antibody 8Anc195 Recognizes Closed And Open States Of Hiv-1 Env.
Cell(Cambridge, Mass. ) V. 162 1379 2015
PubMed-ID: 26359989  |  Reference-DOI: 10.1016/J.CELL.2015.08.035

(-) Compounds

Molecule 1 - HIV-1 YU2 GP120
    Chains: A, E, I
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HIV-1
    Organism Scientific: HUMAN IMMUNODEFICIENCY VIRUS 1
    Organism Taxid: 11676
    Strain: YU2
 
Molecule 2 - T-CELL SURFACE GLYCOPROTEIN CD4
    Chains: B, F, J
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: T-CELL SURFACE ANTIGEN T4/LEU-3
 
Molecule 3 - FAB OF BROADLY NEUTRALIZING ANTIBODY 17B
    Chains: C, G, K
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 4 - FAB OF BROADLY NEUTRALIZING ANTIBODY 17B
    Chains: D, H, L
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 5 - FAB OF BROADLY NEUTRALIZING ANTIBODY 8ANC195
    Chains: M, O, Q
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 6 - FAB OF BROADLY NEUTRALIZING ANTIBODY 8ANC195
    Chains: N, P, R
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293-6E
    Expression System Common: HUMAN
    Expression System Plasmid: PTT5
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  123456789101112131415161718
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 45)

Asymmetric/Biological Unit (1, 45)
No.NameCountTypeFull Name
1NAG45Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (45, 45)

Asymmetric Unit (45, 45)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:88BINDING SITE FOR MONO-SACCHARIDE NAG A 588 BOUND TO ASN A 88
02AC2SOFTWARELEU A:125 , ASN A:197BINDING SITE FOR MONO-SACCHARIDE NAG A 697 BOUND TO ASN A 197
03AC3SOFTWAREASN A:234 , THR A:236 , GLN A:352 , THR N:75BINDING SITE FOR MONO-SACCHARIDE NAG A 734 BOUND TO ASN A 234
04AC4SOFTWARELEU A:86 , ASN A:241BINDING SITE FOR MONO-SACCHARIDE NAG A 741 BOUND TO ASN A 241
05AC5SOFTWAREASN A:262 , ASN A:377 , CYS A:445 , SER A:446 , SER A:447BINDING SITE FOR MONO-SACCHARIDE NAG A 762 BOUND TO ASN A 262
06AC6SOFTWAREASN A:276 , THR A:278 , ASN A:279BINDING SITE FOR MONO-SACCHARIDE NAG A 776 BOUND TO ASN A 276
07AC7SOFTWAREGLU A:268 , GLU A:269 , ILE A:270 , ASN A:289 , GLN A:344BINDING SITE FOR MONO-SACCHARIDE NAG A 789 BOUND TO ASN A 289
08AC8SOFTWAREASN A:295 , ARG A:444 , SER A:446BINDING SITE FOR MONO-SACCHARIDE NAG A 795 BOUND TO ASN A 295
09AC9SOFTWAREASN A:356BINDING SITE FOR MONO-SACCHARIDE NAG A 856 BOUND TO ASN A 356
10BC1SOFTWAREASN A:386 , GLN A:389BINDING SITE FOR MONO-SACCHARIDE NAG A 886 BOUND TO ASN A 386
11BC2SOFTWARETHR A:392 , ASN A:394 , LYS A:398 , LEU A:407BINDING SITE FOR MONO-SACCHARIDE NAG A 894 BOUND TO ASN A 394
12BC3SOFTWAREASN A:408 , GLY A:411 , ARG A:412BINDING SITE FOR MONO-SACCHARIDE NAG A 908 BOUND TO ASN A 408
13BC4SOFTWAREVAL A:293 , SER A:446 , ASN A:448BINDING SITE FOR MONO-SACCHARIDE NAG A 948 BOUND TO ASN A 448
14BC5SOFTWAREASN A:463BINDING SITE FOR MONO-SACCHARIDE NAG A 963 BOUND TO ASN A 463
15BC6SOFTWAREASN E:88BINDING SITE FOR MONO-SACCHARIDE NAG E 588 BOUND TO ASN E 88
16BC7SOFTWARELEU E:125 , ASN E:197BINDING SITE FOR MONO-SACCHARIDE NAG E 697 BOUND TO ASN E 197
17BC8SOFTWAREASN E:234 , THR E:236 , GLN E:352 , THR P:75BINDING SITE FOR MONO-SACCHARIDE NAG E 734 BOUND TO ASN E 234
18BC9SOFTWARELEU E:86 , ASN E:241BINDING SITE FOR MONO-SACCHARIDE NAG E 741 BOUND TO ASN E 241
19CC1SOFTWAREASN E:262 , ASN E:377 , CYS E:445 , SER E:446 , SER E:447BINDING SITE FOR MONO-SACCHARIDE NAG E 762 BOUND TO ASN E 262
20CC2SOFTWAREASN E:276 , THR E:278 , ASN E:279BINDING SITE FOR MONO-SACCHARIDE NAG E 776 BOUND TO ASN E 276
21CC3SOFTWAREGLU E:268 , GLU E:269 , ILE E:270 , ASN E:289 , GLN E:344BINDING SITE FOR MONO-SACCHARIDE NAG E 789 BOUND TO ASN E 289
22CC4SOFTWAREASN E:295 , ARG E:444 , SER E:446BINDING SITE FOR MONO-SACCHARIDE NAG E 795 BOUND TO ASN E 295
23CC5SOFTWAREASN E:356BINDING SITE FOR MONO-SACCHARIDE NAG E 856 BOUND TO ASN E 356
24CC6SOFTWAREASN E:386 , GLN E:389BINDING SITE FOR MONO-SACCHARIDE NAG E 886 BOUND TO ASN E 386
25CC7SOFTWARETHR E:392 , ASN E:394 , LYS E:398 , LEU E:407BINDING SITE FOR MONO-SACCHARIDE NAG E 894 BOUND TO ASN E 394
26CC8SOFTWAREASN E:408 , GLY E:411 , ARG E:412BINDING SITE FOR MONO-SACCHARIDE NAG E 908 BOUND TO ASN E 408
27CC9SOFTWAREVAL E:293 , SER E:446 , ASN E:448BINDING SITE FOR MONO-SACCHARIDE NAG E 948 BOUND TO ASN E 448
28DC1SOFTWAREASN E:463BINDING SITE FOR MONO-SACCHARIDE NAG E 963 BOUND TO ASN E 463
29DC2SOFTWAREASN I:88BINDING SITE FOR MONO-SACCHARIDE NAG I 588 BOUND TO ASN I 88
30DC3SOFTWARELEU I:125 , ASN I:197BINDING SITE FOR MONO-SACCHARIDE NAG I 697 BOUND TO ASN I 197
31DC4SOFTWAREASN I:234 , THR I:236 , GLN I:352 , THR R:75BINDING SITE FOR MONO-SACCHARIDE NAG I 734 BOUND TO ASN I 234
32DC5SOFTWARELEU I:86 , ASN I:241BINDING SITE FOR MONO-SACCHARIDE NAG I 741 BOUND TO ASN I 241
33DC6SOFTWAREASN I:262 , ASN I:377 , CYS I:445 , SER I:446 , SER I:447BINDING SITE FOR MONO-SACCHARIDE NAG I 762 BOUND TO ASN I 262
34DC7SOFTWAREASN I:276 , THR I:278 , ASN I:279BINDING SITE FOR MONO-SACCHARIDE NAG I 776 BOUND TO ASN I 276
35DC8SOFTWAREGLU I:268 , GLU I:269 , ILE I:270 , ASN I:289 , GLN I:344BINDING SITE FOR MONO-SACCHARIDE NAG I 789 BOUND TO ASN I 289
36DC9SOFTWAREASN I:295 , ARG I:444 , SER I:446BINDING SITE FOR MONO-SACCHARIDE NAG I 795 BOUND TO ASN I 295
37EC1SOFTWAREASN I:356BINDING SITE FOR MONO-SACCHARIDE NAG I 856 BOUND TO ASN I 356
38EC2SOFTWAREASN I:386 , GLN I:389BINDING SITE FOR MONO-SACCHARIDE NAG I 886 BOUND TO ASN I 386
39EC3SOFTWARETHR I:392 , ASN I:394 , LYS I:398 , LEU I:407BINDING SITE FOR MONO-SACCHARIDE NAG I 894 BOUND TO ASN I 394
40EC4SOFTWAREASN I:408 , GLY I:411 , ARG I:412BINDING SITE FOR MONO-SACCHARIDE NAG I 908 BOUND TO ASN I 408
41EC5SOFTWAREVAL I:293 , SER I:446 , ASN I:448BINDING SITE FOR MONO-SACCHARIDE NAG I 948 BOUND TO ASN I 448
42EC6SOFTWAREASN I:463BINDING SITE FOR MONO-SACCHARIDE NAG I 963 BOUND TO ASN I 463
43EC7SOFTWAREASN N:82BBINDING SITE FOR MONO-SACCHARIDE NAG N1000 BOUND TO ASN N 82B
44EC8SOFTWAREASN P:82BBINDING SITE FOR MONO-SACCHARIDE NAG P1000 BOUND TO ASN P 82B
45EC9SOFTWAREASN R:82BBINDING SITE FOR MONO-SACCHARIDE NAG R1000 BOUND TO ASN R 82B

(-) SS Bonds  (51, 51)

Asymmetric/Biological Unit
No.Residues
1A:119 -A:205
2A:126 -A:196
3A:218 -A:247
4A:228 -A:239
5A:296 -A:331
6A:378 -A:445
7A:385 -A:418
8B:16 -B:84
9B:130 -B:159
10C:23 -C:88
11C:134 -C:194
12D:22 -D:92
13D:140 -D:196
14E:119 -E:205
15E:126 -E:196
16E:218 -E:247
17E:228 -E:239
18E:296 -E:331
19E:378 -E:445
20E:385 -E:418
21F:16 -F:84
22F:130 -F:159
23G:23 -G:88
24G:134 -G:194
25H:22 -H:92
26H:140 -H:196
27I:119 -I:205
28I:126 -I:196
29I:218 -I:247
30I:228 -I:239
31I:296 -I:331
32I:378 -I:445
33I:385 -I:418
34J:16 -J:84
35J:130 -J:159
36K:23 -K:88
37K:134 -K:194
38L:22 -L:92
39L:140 -L:196
40M:23 -M:88
41M:134 -M:194
42N:22 -N:92
43N:140 -N:196
44O:23 -O:88
45O:134 -O:194
46P:22 -P:92
47P:140 -P:196
48Q:23 -Q:88
49Q:134 -Q:194
50R:22 -R:92
51R:140 -R:196

(-) Cis Peptide Bonds  (27, 27)

Asymmetric/Biological Unit
No.Residues
1Trp C:94 -Pro C:95
2Tyr C:140 -Pro C:141
3Phe D:146 -Pro D:147
4Glu D:148 -Pro D:149
5Trp G:94 -Pro G:95
6Tyr G:140 -Pro G:141
7Phe H:146 -Pro H:147
8Glu H:148 -Pro H:149
9Trp K:94 -Pro K:95
10Tyr K:140 -Pro K:141
11Phe L:146 -Pro L:147
12Glu L:148 -Pro L:149
13Ser M:7 -Pro M:8
14Tyr M:94 -Pro M:95
15Tyr M:140 -Pro M:141
16Phe N:146 -Pro N:147
17Glu N:148 -Pro N:149
18Ser O:7 -Pro O:8
19Tyr O:94 -Pro O:95
20Tyr O:140 -Pro O:141
21Phe P:146 -Pro P:147
22Glu P:148 -Pro P:149
23Ser Q:7 -Pro Q:8
24Tyr Q:94 -Pro Q:95
25Tyr Q:140 -Pro Q:141
26Phe R:146 -Pro R:147
27Glu R:148 -Pro R:149

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5A7X)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5A7X)

(-) Exons   (0, 0)

(no "Exon" information available for 5A7X)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:306
                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee...hhhhhhhhhhhhhh........eeeeeee.....eeeeee.............eeee....eeeee........eeee...eee.eeeee.......eee.........eee..........eeeeeeeeeeeeee...eeeeehhhhhhhhhhhhhhhhhhhh...eeee......hhhhhheeeee..eeeee.......ee..........eeeeeeeee.eee......eee.........eeeeeeeeeee..........eeee.....hhhhhhhhhhh.eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5a7x A   86 LENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE  492
                                    95       105       115       125   ||  199       209       219       229       239       249       259       269       279       289       299|      338       348       358       368       378       388       398|      416       426       436       446       456       466       476       486      
                                                                     129|                                                                                                      299|                                                                  398|                                                                                     
                                                                      194                                                                                                       329                                                                   407                                                                                     


Chain B from PDB  Type:PROTEIN  Length:181
                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....ee............eeee.....eeeeee..eeee....hhh.ee.hhhhhh......ee...hhhhheeeeeee..ee..eeeeeeeeee...........eeeeee.......eee.........ee..eeee.........ee...eee..eee...ee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x B    1 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK  181
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180 


Chain C from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee...eeee.....eeeeeee.......eeeeee.......eeee...ee.......eeeee...eeeeee...hhhhheeeeeee........ee....eeee.......eeeee..hhhhhhhh.eeeeeeeeee....eeeeeee......................eeeeeeeee.........eeeeeeee......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x C    1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG  212
                                    10        20        30        40        50        60        70        80        90     || 98       108       118       128       138       148       158       168       178       188       198       208    
                                                                                                                         95A|                                                                                                                     
                                                                                                                          95B                                                                                                                     


Chain D from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee....eeeeeeeee..hhh.eeeeeeee......eeeeee.hhhh.eee.hhhh..eeeeee....eeeeeee.......eeeeeeeee..hhhhh.........ee...eeeee...........ee..........eeeeee..........eeee.hhh.......eeeee.....eeeeeeeeee.hhh....eeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x D    1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK  214
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F|||||  105       115       125       135       145       155       165       175       185       195       205         
                                                                              52A                            82A||               100A|||||100J|                                                                                                                  
                                                                                                              82B|                100B|||||100K                                                                                                                  
                                                                                                               82C                 100C||||||                                                                                                                    
                                                                                                                                    100D|||||                                                                                                                    
                                                                                                                                     100E||||                                                                                                                    
                                                                                                                                      100F|||                                                                                                                    
                                                                                                                                       100G||                                                                                                                    
                                                                                                                                        100H|                                                                                                                    
                                                                                                                                         100I                                                                                                                    


Chain E from PDB  Type:PROTEIN  Length:306
                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee...hhhhhhhhhhhhhh........eeeeeee.....eeeeee.............eeee....eeeee........eeee...eee.eeeee.......eee.........eee..........eeeeeeeeeeeeee...eeeeehhhhhhhhhhhhhhhhhhhh...eeee......hhhhhheeeee..eeeee.......ee..........eeeeeeeee.eee......eee.........eeeeeeeeeee..........eeee.....hhhhhhhhhhh.eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5a7x E   86 LENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE  492
                                    95       105       115       125   ||  199       209       219       229       239       249       259       269       279       289       299|      338       348       358       368       378       388       398|      416       426       436       446       456       466       476       486      
                                                                     129|                                                                                                      299|                                                                  398|                                                                                     
                                                                      194                                                                                                       329                                                                   407                                                                                     


Chain F from PDB  Type:PROTEIN  Length:181
                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....ee............eeee.....eeeeee..eeee....hhh.ee.hhhhhh......ee...hhhhheeeeeee..ee..eeeeeeeeee...........eeeeee.......eee.........ee..eeee.........ee...eee..eee...ee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x F    1 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK  181
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180 


Chain G from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee...eeee.....eeeeeee.......eeeeee.......eeee...ee.......eeeee...eeeeee...hhhhheeeeeee........ee....eeee.......eeeee..hhhhhhhh.eeeeeeeeee....eeeeeee......................eeeeeeeee.........eeeeeeee......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x G    1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG  212
                                    10        20        30        40        50        60        70        80        90     || 98       108       118       128       138       148       158       168       178       188       198       208    
                                                                                                                         95A|                                                                                                                     
                                                                                                                          95B                                                                                                                     


Chain H from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee....eeeeeeeee..hhh.eeeeeeee......eeeeee.hhhh.eee.hhhh..eeeeee....eeeeeee.......eeeeeeeee..hhhhh.........ee...eeeee...........ee..........eeeeee..........eeee.hhh.......eeeee.....eeeeeeeeee.hhh....eeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x H    1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK  214
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F|||||  105       115       125       135       145       155       165       175       185       195       205         
                                                                              52A                            82A||               100A|||||100J|                                                                                                                  
                                                                                                              82B|                100B|||||100K                                                                                                                  
                                                                                                               82C                 100C||||||                                                                                                                    
                                                                                                                                    100D|||||                                                                                                                    
                                                                                                                                     100E||||                                                                                                                    
                                                                                                                                      100F|||                                                                                                                    
                                                                                                                                       100G||                                                                                                                    
                                                                                                                                        100H|                                                                                                                    
                                                                                                                                         100I                                                                                                                    


Chain I from PDB  Type:PROTEIN  Length:306
                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee...hhhhhhhhhhhhhh........eeeeeee.....eeeeee.............eeee....eeeee........eeee...eee.eeeee.......eee.........eee..........eeeeeeeeeeeeee...eeeeehhhhhhhhhhhhhhhhhhhh...eeee......hhhhhheeeee..eeeee.......ee..........eeeeeeeee.eee......eee.........eeeeeeeeeee..........eeee.....hhhhhhhhhhh.eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5a7x I   86 LENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE  492
                                    95       105       115       125   ||  199       209       219       229       239       249       259       269       279       289       299|      338       348       358       368       378       388       398|      416       426       436       446       456       466       476       486      
                                                                     129|                                                                                                      299|                                                                  398|                                                                                     
                                                                      194                                                                                                       329                                                                   407                                                                                     


Chain J from PDB  Type:PROTEIN  Length:181
                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....ee............eeee.....eeeeee..eeee....hhh.ee.hhhhhh......ee...hhhhheeeeeee..ee..eeeeeeeeee...........eeeeee.......eee.........ee..eeee.........ee...eee..eee...ee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x J    1 KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK  181
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180 


Chain K from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee...eeee.....eeeeeee.......eeeeee.......eeee...ee.......eeeee...eeeeee...hhhhheeeeeee........ee....eeee.......eeeee..hhhhhhhh.eeeeeeeeee....eeeeeee......................eeeeeeeee.........eeeeeeee......eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x K    1 DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG  212
                                    10        20        30        40        50        60        70        80        90     || 98       108       118       128       138       148       158       168       178       188       198       208    
                                                                                                                         95A|                                                                                                                     
                                                                                                                          95B                                                                                                                     


Chain L from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee....eeeeeeeee..hhh.eeeeeeee......eeeeee.hhhh.eee.hhhh..eeeeee....eeeeeee.......eeeeeeeee..hhhhh.........ee...eeeee...........ee..........eeeeee..........eeee.hhh.......eeeee.....eeeeeeeeee.hhh....eeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x L    1 EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK  214
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F|||||  105       115       125       135       145       155       165       175       185       195       205         
                                                                              52A                            82A||               100A|||||100J|                                                                                                                  
                                                                                                              82B|                100B|||||100K                                                                                                                  
                                                                                                               82C                 100C||||||                                                                                                                    
                                                                                                                                    100D|||||                                                                                                                    
                                                                                                                                     100E||||                                                                                                                    
                                                                                                                                      100F|||                                                                                                                    
                                                                                                                                       100G||                                                                                                                    
                                                                                                                                        100H|                                                                                                                    
                                                                                                                                         100I                                                                                                                    


Chain M from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x M    1 DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE  213
                                    10        20        30|       39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209    
                                                        30A                                                                                                                                                                                       


Chain N from PDB  Type:PROTEIN  Length:224
                                                                                                                                                                                                                                                                 
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeeee.....eeeeeeee..eeee.hhhh..eeeeee........eeeeee...hhhhheeeeeeeee........ee..ee...ee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeehhhhhhh...eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x N    1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  213
                                    10        20        30     |  39        49  ||    60        70       77C|     ||83        93      100C|||||||101       111       121    || 139       149       159       169       179       189       199       209    
                                                             35A               52|                     77A|||   82A||               100A|||||100J||                       126|                                                                              
                                                                                54                      77B||    82B|                100B|||||100K|                        135                                                                              
                                                                                                         77C|     82C                 100C|||||100L                                                                                                         
                                                                                                          77D                          100D|||||                                                                                                            
                                                                                                                                        100E||||                                                                                                            
                                                                                                                                         100F|||                                                                                                            
                                                                                                                                          100G||                                                                                                            
                                                                                                                                           100H|                                                                                                            
                                                                                                                                            100I                                                                                                            


Chain O from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x O    1 DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE  213
                                    10        20        30|       39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209    
                                                        30A                                                                                                                                                                                       


Chain P from PDB  Type:PROTEIN  Length:224
                                                                                                                                                                                                                                                                 
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeeee.....eeeeeeee..eeee.hhhh..eeeeee........eeeeee...hhhhheeeeeeeee........ee..ee...ee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeehhhhhhh...eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x P    1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  213
                                    10        20        30     |  39        49  ||    60        70       77C|     ||83        93      100C|||||||101       111       121    || 139       149       159       169       179       189       199       209    
                                                             35A               52|                     77A|||   82A||               100A|||||100J||                       126|                                                                              
                                                                                54                      77B||    82B|                100B|||||100K|                        135                                                                              
                                                                                                         77C|     82C                 100C|||||100L                                                                                                         
                                                                                                          77D                          100D|||||                                                                                                            
                                                                                                                                        100E||||                                                                                                            
                                                                                                                                         100F|||                                                                                                            
                                                                                                                                          100G||                                                                                                            
                                                                                                                                           100H|                                                                                                            
                                                                                                                                            100I                                                                                                            


Chain Q from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x Q    1 DIQMTQSPSTLSASIGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFSGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE  213
                                    10        20        30|       39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209    
                                                        30A                                                                                                                                                                                       


Chain R from PDB  Type:PROTEIN  Length:224
                                                                                                                                                                                                                                                                 
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeeee.....eeeeeeee..eeee.hhhh..eeeeee........eeeeee...hhhhheeeeeeeee........ee..ee...ee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeehhhhhhh...eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5a7x R    1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  213
                                    10        20        30     |  39        49  ||    60        70       77C|     ||83        93      100C|||||||101       111       121    || 139       149       159       169       179       189       199       209    
                                                             35A               52|                     77A|||   82A||               100A|||||100J||                       126|                                                                              
                                                                                54                      77B||    82B|                100B|||||100K|                        135                                                                              
                                                                                                         77C|     82C                 100C|||||100L                                                                                                         
                                                                                                          77D                          100D|||||                                                                                                            
                                                                                                                                        100E||||                                                                                                            
                                                                                                                                         100F|||                                                                                                            
                                                                                                                                          100G||                                                                                                            
                                                                                                                                           100H|                                                                                                            
                                                                                                                                            100I
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5A7X)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5A7X)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5A7X)

(-) Gene Ontology  (72, 76)

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    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ENV_HV1Y2 | P35961
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CD4_HUMAN | P01730: 1cdh 1cdi 1cdj 1cdu 1cdy 1g9m 1g9n 1gc1 1jl4 1opn 1opt 1opw 1q68 1rzj 1rzk 1wbr 1wio 1wip 1wiq 2b4c 2jkr 2jkt 2klu 2nxy 2nxz 2ny0 2ny1 2ny2 2ny3 2ny4 2ny5 2ny6 2qad 3b71 3cd4 3j70 3jcb 3jcc 3jwd 3jwo 3lqa 3o2d 3s4s 3s5l 3t0e 4h8w 4jm2 4p9h 4q6i 4r2g 4r4h 4rqs 5a8h 5cay 5thr 5u1f 5vn3
        ENV_HV1Y2 | P35961: 1g9n 1rzk 1yyl 1yym 2i5y 2i60 2ny7 2qad 3hi1 3tgq 4dvr 4jo3 4jzw 4jzz 4k0a 4ka2 4laj 4r4f 4rqs 4rwy 5a8h

(-) Related Entries Specified in the PDB File

5a8h CRYO-ET SUBTOMOGRAM AVERAGING OF BG505 SOSIP.664 IN COMPLEX WITH SCD4, 17B, AND 8ANC195 RELATED ID: EMD-3086 RELATED DB: EMDB