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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE OF GSK3B IN COMPLEX WITH CHIR99021
 
Authors :  A. White, D. Lakshminarasimhan, A. Nadupalli, R. K. Suto
Date :  15 Jan 16  (Deposition) - 25 May 16  (Release) - 27 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Protein Kinase, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. F. Wagner, J. A. Bishop, J. P. Gale, X. Shi, M. Walk, J. Ketterman, D. Patnaik, D. Barker, D. Walpita, A. J. Campbell, S. Nguyen, M. Lewis, L. Ross, M. Weiwer, W. F. An, A. R. Germain, P. P. Nag, S. Metkar, T. Kaya, S. Dandapani, D. E. Olson, A. L. Barbe, F. Lazzaro, J. R. Sacher, J. H. Cheah, D. Fei, J. Perez, B. Munoz, M. Palmer, K. Stegmaier, S. L. Schreiber, E. Scolnick, Y. L. Zhang, S. J. Haggarty, E. B. Holson, J. Q. Pan
Inhibitors Of Glycogen Synthase Kinase 3 With Exquisite Kinome-Wide Selectivity And Their Functional Effects.
Acs Chem. Biol. V. 11 1952 2016
PubMed-ID: 27128528  |  Reference-DOI: 10.1021/ACSCHEMBIO.6B00306

(-) Compounds

Molecule 1 - GLYCOGEN SYNTHASE KINASE-3 BETA
    Chains: A, B
    EC Number: 2.7.11.26, 2.7.11.1
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Plasmid: PACG2T BACULOGOLD
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Gene: GSK3B
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: GSK-3 BETA,SERINE/THREONINE-PROTEIN KINASE GSK3B

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 8)

Asymmetric/Biological Unit (4, 8)
No.NameCountTypeFull Name
165C2Ligand/IonCHIR99021
2MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
3MG2Ligand/IonMAGNESIUM ION
4PTR2Mod. Amino AcidO-PHOSPHOTYROSINE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:62 , GLY A:63 , ASN A:64 , PHE A:67 , ALA A:83 , ASP A:133 , TYR A:134 , VAL A:135 , PRO A:136 , THR A:138 , GLN A:185 , LEU A:188 , CYS A:199 , ASP A:200binding site for residue 65C A 501
2AC2SOFTWAREASP A:264 , GLU A:268binding site for residue MG A 502
3AC3SOFTWAREARG A:96 , ARG A:180 , LYS A:205 , VAL A:214 , VAL B:263 , VAL B:267 , PHE B:291binding site for residue MES A 503
4AC4SOFTWAREILE B:62 , ASN B:64 , PHE B:67 , VAL B:70 , ALA B:83 , ASP B:133 , TYR B:134 , VAL B:135 , THR B:138 , GLN B:185 , LEU B:188binding site for residue 65C B 501
5AC5SOFTWAREASP B:260 , ASP B:264 , GLU B:268binding site for residue MG B 502
6AC6SOFTWAREPHE A:291 , PHE A:293 , ARG B:96 , ARG B:180 , VAL B:214binding site for residue MES B 503

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5HLN)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly B:47 -Pro B:48

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HLN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HLN)

(-) Exons   (0, 0)

(no "Exon" information available for 5HLN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:347
                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee.......eeeeeeeeeeeeee..eeeeeeee.....eeeeeeee.......hhhhhhhhh.......eeeeeee....eeeeeee...eehhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee......eee......ee............hhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh..hhhhhhhhhhhhh..........hhhhh.....hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhh.................hhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hln A  34 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSyICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARI 384
                                    43        53        63        73        83        93       103       113     ||127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
                                                                                                               119|                                                                                         216-PTR                                                                                                                                                                    
                                                                                                                124                                                                                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:347
                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.......eeeeeeeeeeeeee..eeeeeeee.....eeeeeeeeee.....hhhhhhhh........eeeeeeee.....eeeeeeeee...eehhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee......eee......ee............hhhhhhhhhhh......hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh..hhhhhhhhhhhhhhh........hhhhhh....hhhhhhhhhhhh........hhhhhhhhhhhhh....................hhhhhh.hhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hln B  37 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSyICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 383
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       
                                                                                                                                                                                                             216-PTR
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HLN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HLN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HLN)

(-) Gene Ontology  (146, 146)

Asymmetric/Biological Unit(hide GO term definitions)

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    Gly B:47 - Pro B:48   [ RasMol ]  
 

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  5hln
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  GSK3B_HUMAN | P49841
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  2.7.11.1
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  2.7.11.26
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GSK3B_HUMAN | P49841: 1gng 1h8f 1i09 1j1b 1j1c 1o6k 1o6l 1o9u 1pyx 1q3d 1q3w 1q41 1q4l 1q5k 1r0e 1uv5 2jdo 2jdr 2jld 2o5k 2ow3 2uw9 2x39 2xh5 3cqu 3cqw 3du8 3e87 3e88 3e8d 3f7z 3f88 3gb2 3i4b 3l1s 3m1s 3mv5 3ow4 3pup 3q3b 3qkk 3say 3sd0 3zdi 3zrk 3zrl 3zrm 4acc 4acd 4acg 4ach 4afj 4b7t 4dit 4ekk 4iq6 4j1r 4j71 4nm0 4nm3 4nm5 4nm7 4ptc 4pte 4ptg 5f94 5f95 5hlp 5k5n

(-) Related Entries Specified in the PDB File

5hlp