4QVH - JenaLib

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Title :   CRYSTAL STRUCTURE OF THE ESSENTIAL MYCOBACTERIUM TUBERCULOSIS PHOSPHOPANTETHEINYL TRANSFERASE PPTT, SOLVED AS A FUSION PROTEIN WITH MALTOSE BINDING PROTEIN

Authors :   J. Jung, G. Bashiri, J. M. Johnston, E. N. Baker

Date :   15 Jul 14 (Deposition) - 17 Dec 14 (Release) - 21 Oct 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.75

Chains :   Asym. Unit : A,B
Biol. Unit 1: A (1x),B (1x)

Keywords :   A/B-Fold, Phosphopantetheinyl Transferase, Acyl Carrier Protein, Peptidyl Carrier Protein, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Jung, G. Bashiri, J. M. Johnston, A. S. Brown, D. F. Ackerley, E. N. Baker
Crystal Structure Of The Essential Mycobacterium Tuberculosis Phosphopantetheinyl Transferase Pptt, Solved A A Fusion Protein With Maltose Binding Protein.
J. Struct. Biol. V. 188 274 2014
PubMed-ID: 25450595 | Reference-DOI: 10.1016/J.JSB.2014.10.004

Molecule 1 - MALTOSE-BINDING PERIPLASMIC PROTEIN, 4'-PHOSPHOPANTETHEINYL TRANSFERASE CHIMERA
	(coa	:	APO-[ACYL-CARRIER PROTEIN]PANTETHEINEPHOSPHOTRANSFERASE)
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMALX
	Expression System Strain	:	BL21 (DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PMALX
	Gene	:	MALE, PPTT
	Organism Scientific	:	ESCHERICHIA COLI, MYCOBACTERIUM TUBERCULOSIS
	Organism Taxid	:	562, 83332
	Strain	:	H37RV
	Synonym	:	MBP, MMBP, MALTODEXTRIN-BINDING PROTEIN, PHOSPHOPANTETHEINYL
	Transferase Pptt (coa	:	APO-[ACP]PANTETHEINEPHOSPHOTRANSFERASE)

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A (1x)	B (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 15)

No.	Name	Count	Type	Full Name
1	COA	2	Ligand/Ion	COENZYME A
2	FLC	2	Ligand/Ion	CITRATE ANION
3	GOL	7	Ligand/Ion	GLYCEROL
4	MAL	2	Ligand/Ion	MALTOSE
5	MG	2	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (4, 7)

No.	Name	Count	Type	Full Name
1	COA	1	Ligand/Ion	COENZYME A
2	FLC	1	Ligand/Ion	CITRATE ANION
3	GOL	4	Ligand/Ion	GLYCEROL
4	MAL	1	Ligand/Ion	MALTOSE
5	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:15 , LYS A:16 , TRP A:63 , ALA A:64 , ASP A:66 , ARG A:67 , GLU A:112 , GLU A:154 , PRO A:155 , TYR A:156 , TRP A:341 , ARG A:345 , HOH A:706 , HOH A:753 , HOH A:876 , HOH A:942 , HOH A:1095	BINDING SITE FOR RESIDUE MAL A 601
02	AC2	SOFTWARE	ARG A:419 , ARG A:427 , LYS A:446 , LYS A:449 , GLY A:450 , GLU A:451 , PRO A:452 , LEU A:462 , THR A:463 , HIS A:464 , ASP A:485 , GLU A:487 , LYS A:527 , GLU A:528 , TYR A:531 , LYS A:532 , PHE A:535 , TRP A:541 , LEU A:542 , GLY A:543 , PHE A:544 , MG A:603 , HOH A:702 , HOH A:819 , HOH A:845 , HOH A:875	BINDING SITE FOR RESIDUE COA A 602
03	AC3	SOFTWARE	ASP A:485 , ALA A:486 , GLU A:487 , COA A:602 , HOH A:754	BINDING SITE FOR RESIDUE MG A 603
04	AC4	SOFTWARE	PRO A:410 , LEU A:411 , ARG A:414 , SER A:415 , HOH A:898 , GLY B:447 , ASP B:448 , GLU B:451 , LYS B:539	BINDING SITE FOR RESIDUE GOL A 604
05	AC5	SOFTWARE	MET A:372 , THR A:373 , VAL A:374 , GLY A:375 , GLU A:394 , TYR A:396 , HOH A:763 , HOH A:811	BINDING SITE FOR RESIDUE GOL A 605
06	AC6	SOFTWARE	GLY A:447 , ASP A:448 , LYS A:539 , HOH A:878 , PRO B:410 , LEU B:411 , ARG B:414 , SER B:415	BINDING SITE FOR RESIDUE GOL A 606
07	AC7	SOFTWARE	ASN A:295 , LYS A:296 , ARG A:317 , HOH A:778 , HOH A:844 , HOH A:1093	BINDING SITE FOR RESIDUE GOL A 607
08	AC8	SOFTWARE	VAL A:416 , ARG A:419 , HOH A:703 , HOH A:764 , HOH A:845 , HOH A:980 , HOH A:981 , HOH A:988 , HOH A:1065 , HOH A:1081 , ASP B:448 , LYS B:449 , PHE B:535 , LYS B:539	BINDING SITE FOR RESIDUE FLC A 608
09	AC9	SOFTWARE	ASP B:15 , LYS B:16 , TRP B:63 , ALA B:64 , ASP B:66 , ARG B:67 , GLU B:112 , GLU B:154 , PRO B:155 , TYR B:156 , TRP B:341 , ARG B:345 , HOH B:714 , HOH B:769 , HOH B:770 , HOH B:907	BINDING SITE FOR RESIDUE MAL B 601
10	BC1	SOFTWARE	ARG B:419 , ARG B:427 , LYS B:446 , LYS B:449 , GLY B:450 , GLU B:451 , PRO B:452 , LEU B:462 , THR B:463 , HIS B:464 , ASP B:485 , GLU B:487 , LYS B:527 , GLU B:528 , TYR B:531 , LYS B:532 , PHE B:535 , TRP B:541 , LEU B:542 , GLY B:543 , PHE B:544 , MG B:603 , HOH B:702 , HOH B:726 , HOH B:729 , HOH B:955 , HOH B:1037	BINDING SITE FOR RESIDUE COA B 602
11	BC2	SOFTWARE	ASP B:485 , ALA B:486 , GLU B:487 , GLU B:528 , COA B:602 , HOH B:707	BINDING SITE FOR RESIDUE MG B 603
12	BC3	SOFTWARE	MET B:372 , THR B:373 , VAL B:374 , GLY B:375 , GLU B:394 , HOH B:773	BINDING SITE FOR RESIDUE GOL B 604
13	BC4	SOFTWARE	HIS B:548 , ARG B:565 , LEU B:567 , HOH B:1052	BINDING SITE FOR RESIDUE GOL B 605
14	BC5	SOFTWARE	GLU A:132 , ARG B:480 , PRO B:577 , LEU B:578 , THR B:579 , THR B:580	BINDING SITE FOR RESIDUE GOL B 606
15	BC6	SOFTWARE	ASP A:448 , LYS A:449 , PHE A:535 , LYS A:539 , HOH A:716 , HOH A:838 , HOH A:1044 , VAL B:416 , HOH B:726 , HOH B:753 , HOH B:1047 , HOH B:1062	BINDING SITE FOR RESIDUE FLC B 607

(no "SS Bond" information available for 4QVH)

(no "Cis Peptide Bond" information available for 4QVH)

(no "SAP(SNP)/Variant" information available for 4QVH)

(no "PROSITE Motif" information available for 4QVH)

(no "Exon" information available for 4QVH)

Asymmetric Unit

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Chain A from PDB  Type:PROTEIN  Length:596
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.....hhhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhh......eeeee..hhhhhhhh........hhhhhh..hhhhhhhhee..ee..eeeeee..eeeee.........hhhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh..eeeeee..eeeeeeee..hhhhhhhhhhhhhhhhh.......hhhhhhhhhhh..eeeeeehhhhhhhhhh...eeee............eeeeeeeee.....hhhhhhhhhhhh..hhhhhhhhhhhh...ee.hhhhhhhhh.hhhhhhhhhhhhhhee.....hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh........hhhhhhhhhhh.eeeeee............hhhhhh..hhhhhhhhhhhhhhhhhhhhhh.......ee.hhh.ee....eeeeeeee..eeeeeeee......eeeeeee......hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeee.....eeeeeeee.............eeeeeeeee..eeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qvh A   2 KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAMTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARSVAKRRNEFITVRHCARIALDQLGVPPAPILKGDKGEPCWPDGMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPNGVLDAISLPAERADMPRTMPAALHWDRILFCAKEATYKAWFPLTKRWLGFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL 598
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592      
                                                                                                                                                                                                                                                                       239|                                                                                                                                                                                                                                                                                                                                                                     
                                                                                                                                                                                                                                                                        241

Chain B from PDB  Type:PROTEIN  Length:595
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.....hhhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhh......eeeee..hhhhhhhh........hhhhhh..hhhhhhhhee..ee..eeeeee..eeeee.........hhhhhhhhhhhhhh...eee.....hhhhhhhhhhhh..eeee....eeeeee..hhhhhhhhhhhhhhhhh.......hhhhhhhhhhh..eeeeeehhhhhhhhhhh...eeee............eeeeeeeee.....hhhhhhhhhhhh..hhhhhhhhhhhh...ee.hhhhhhhhh.hhhhhhhhhhhhhhee.....hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh........hhhhhhhhhhh.eeeeee.........hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.......ee.hhh.ee....eeeeeeee..eeeeeeee......eeeeeee......hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeee.....eeeeeeee.............eeeeeeeee..eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qvh B   2 KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAMTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARSVAKRRNEFITVRHCARIALDQLGVPPAPILKGDKGEPCWPDGMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPNGVLDAISLPAERADMPRTMPAALHWDRILFCAKEATYKAWFPLTKRWLGFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL 598
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171||     183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593     
                                                                                                                                                                                                    172|                                                                                                                                                                                                                                                                                                                                                                                                                                       
                                                                                                                                                                                                     175

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(no "SCOP Domain" information available for 4QVH)

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(no "Related Entries Specified in the PDB File" available for 4QVH)

Description

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Ligands, Modified Residues, Ions (5, 15)

Sites (15, 15)

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