Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  (M)L214A MUTANT OF THE RHODOBACTER SPHAEROIDES REACTION CENTER
 
Authors :  R. G. Saer, A. Hardjasa, M. E. P Murphy, J. T. Beatty
Date :  04 Jan 13  (Deposition) - 01 May 13  (Release) - 01 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym./Biol. Unit :  H,L,M
Keywords :  Electron Transfer, Chromatophore, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. G. Saer, A. Hardjasa, F. I. Rosell, A. G. Mauk, M. E. Murphy, J. T. Beatty
Role Of Rhodobacter Sphaeroides Photosynthetic Reaction Center Residue M214 In The Composition, Absorbance Properties, And Conformations Of Ha And Ba Cofactors.
Biochemistry V. 52 2206 2013
PubMed-ID: 23480277  |  Reference-DOI: 10.1021/BI400207M

(-) Compounds

Molecule 1 - REACTION CENTER PROTEIN L CHAIN
    ChainsL
    EngineeredYES
    Expression SystemRHODOBACTER SPHAEROIDES
    Expression System Strain2.4.1
    Expression System Taxid1063
    Expression System Vector TypePLASMID
    GenePUFL, PUHA
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid1063
    Strain2.4.1
    SynonymPHOTOSYNTHETIC REACTION CENTER L SUBUNIT
 
Molecule 2 - REACTION CENTER PROTEIN M CHAIN
    ChainsM
    EngineeredYES
    Expression SystemRHODOBACTER SPHAEROIDES
    Expression System Strain2.4.1
    Expression System Taxid1063
    Expression System Vector TypePLASMID
    GenePUFM
    MutationYES
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid1063
    Strain2.4.1
    SynonymPHOTOSYNTHETIC REACTION CENTER M SUBUNIT
 
Molecule 3 - REACTION CENTER PROTEIN H CHAIN
    ChainsH
    EngineeredYES
    Expression SystemRHODOBACTER SPHAEROIDES
    Expression System Strain2.4.1
    Expression System Taxid1063
    Expression System Vector TypePLASMID
    GenePUFL, PUHA
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid1063
    Strain2.4.1
    SynonymPHOTOSYNTHETIC REACTION CENTER H SUBUNIT

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit HLM

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (12, 33)

Asymmetric/Biological Unit (12, 33)
No.NameCountTypeFull Name
1BCL4Ligand/IonBACTERIOCHLOROPHYLL A
2BPH2Ligand/IonBACTERIOPHEOPHYTIN A
3CDL1Ligand/IonCARDIOLIPIN
4FE1Ligand/IonFE (III) ION
5GGD1Ligand/IonNONADEC-10-ENOIC ACID 2-[3,4-DIHYDROXY-6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-TETRAHYDRO-PYRAN-2-YLOXY]-1-OCTADEC-9-ENOYLOXYMETHYL-ETHYL ESTER
6GOL11Ligand/IonGLYCEROL
7HTO1Ligand/IonHEPTANE-1,2,3-TRIOL
8LDA3Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
9PC11Ligand/Ion1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
10PO45Ligand/IonPHOSPHATE ION
11SPO1Ligand/IonSPHEROIDENE
12U102Ligand/IonUBIQUINONE-10

(-) Sites  (33, 33)

Asymmetric Unit (33, 33)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPHE L:97 , TRP L:100 , GLU L:104 , ILE L:117 , ALA L:120 , PHE L:121 , ALA L:124 , HIS L:153 , VAL L:241 , BCL L:308 , TYR M:210 , ALA M:213 , ALA M:214 , TRP M:252 , MET M:256BINDING SITE FOR RESIDUE BPH L 301
02AC2SOFTWAREALA L:186 , LEU L:189 , HIS L:190 , LEU L:193 , GLU L:212 , ASP L:213 , PHE L:216 , TYR L:222 , SER L:223 , ILE L:224 , GLY L:225 , THR L:226 , ILE L:229 , PC1 M:410BINDING SITE FOR RESIDUE U10 L 302
03AC3SOFTWAREPHE L:97 , ALA L:124 , ALA L:127 , LEU L:131 , VAL L:157 , TYR L:162 , ASN L:166 , PHE L:167 , HIS L:168 , HIS L:173 , ALA L:176 , ILE L:177 , PHE L:180 , SER L:244 , CYS L:247 , MET L:248 , BCL L:308 , TYR M:210 , BCL M:401 , BCL M:402 , U10 M:407BINDING SITE FOR RESIDUE BCL L 303
04AC4SOFTWAREHIS H:126 , GLU L:72 , TYR L:73 , LYS L:82 , THR M:21BINDING SITE FOR RESIDUE PO4 L 304
05AC5SOFTWAREGLN L:87 , TRP L:142BINDING SITE FOR RESIDUE HTO L 305
06AC6SOFTWARETHR H:63 , PHE H:64 , HOH H:426 , ALA L:198 , ASN L:199 , PRO L:200 , CDL M:409BINDING SITE FOR RESIDUE GOL L 306
07AC7SOFTWAREALA L:78 , LEU L:80BINDING SITE FOR RESIDUE GOL L 307
08AC8SOFTWARETYR L:128 , PHE L:146 , ILE L:150 , HIS L:153 , LEU L:154 , BPH L:301 , BCL L:303 , HOH L:426 , PHE M:197 , GLY M:203 , ILE M:206 , ALA M:207 , TYR M:210 , GLY M:211 , LDA M:403BINDING SITE FOR RESIDUE BCL L 308
09AC9SOFTWAREGOL H:303 , GLN L:62 , LDA M:403BINDING SITE FOR RESIDUE GOL L 309
10BC1SOFTWARELEU L:44 , ILE L:88 , ILE L:91 , CYS L:92BINDING SITE FOR RESIDUE PO4 L 310
11BC2SOFTWARESER L:52 , TYR L:67 , LEU L:80 , ALA L:81 , GLY L:83 , HOH L:425BINDING SITE FOR RESIDUE GOL L 311
12BC3SOFTWARETYR L:148BINDING SITE FOR RESIDUE GOL L 312
13BC4SOFTWAREASP H:46 , GLY H:47 , SER L:4 , ARG L:7 , HOH L:414 , HOH L:424 , HOH L:428BINDING SITE FOR RESIDUE GOL L 313
14BC5SOFTWAREHIS L:168 , MET L:174 , ILE L:177 , SER L:178 , THR L:182 , BCL L:303 , HOH L:403 , MET M:122 , ILE M:179 , HIS M:182 , LEU M:183 , THR M:186 , BCL M:402 , BPH M:406 , SPO M:408BINDING SITE FOR RESIDUE BCL M 401
15BC6SOFTWAREVAL L:157 , PHE L:181 , BCL L:303 , LEU M:160 , THR M:186 , ASN M:187 , PHE M:189 , SER M:190 , ASN M:195 , LEU M:196 , PHE M:197 , HIS M:202 , SER M:205 , ILE M:206 , TYR M:210 , VAL M:276 , GLY M:280 , ILE M:284 , BCL M:401 , BPH M:406BINDING SITE FOR RESIDUE BCL M 402
16BC7SOFTWAREBCL L:308 , GOL L:309 , PRO M:200 , LEU M:204BINDING SITE FOR RESIDUE LDA M 403
17BC8SOFTWARELEU M:38 , TRP M:41BINDING SITE FOR RESIDUE LDA M 404
18BC9SOFTWAREHIS L:190 , HIS L:230 , HIS M:219 , GLU M:234 , HIS M:266BINDING SITE FOR RESIDUE FE M 405
19CC1SOFTWAREPHE L:181 , LEU L:185 , LEU L:189 , LEU L:219 , ALA M:125 , VAL M:126 , TRP M:129 , ALA M:149 , PHE M:150 , ALA M:273 , THR M:277 , BCL M:401 , BCL M:402BINDING SITE FOR RESIDUE BPH M 406
20CC2SOFTWAREPHE L:29 , TRP L:100 , BCL L:303 , HIS M:219 , THR M:222 , ALA M:248 , ALA M:249 , TRP M:252 , MET M:256 , PHE M:258 , ASN M:259 , ALA M:260 , THR M:261 , ILE M:265BINDING SITE FOR RESIDUE U10 M 407
21CC3SOFTWAREPHE M:67 , ILE M:70 , GLY M:71 , TRP M:75 , SER M:119 , PHE M:120 , TRP M:157 , GLY M:161 , TRP M:171 , VAL M:175 , ILE M:179 , HIS M:182 , BCL M:401BINDING SITE FOR RESIDUE SPO M 408
22CC4SOFTWAREALA H:16 , TYR H:30 , HOH H:418 , ASN L:199 , PRO L:200 , GOL L:306 , GLY M:143 , LYS M:144 , HIS M:145 , TRP M:148 , ARG M:267 , HOH M:502BINDING SITE FOR RESIDUE CDL M 409
23CC5SOFTWAREVAL L:220 , U10 L:302 , ALA M:27 , SER M:30 , GLY M:31 , VAL M:32 , LEU M:52BINDING SITE FOR RESIDUE PC1 M 410
24CC6SOFTWAREASN M:28 , GLY M:53 , SER M:54BINDING SITE FOR RESIDUE PO4 M 411
25CC7SOFTWAREMET H:175 , ALA H:176 , ARG L:231 , TYR M:3 , ASN M:5 , SER M:8BINDING SITE FOR RESIDUE PO4 M 412
26CC8SOFTWARELEU M:167 , MET M:168 , LEU M:285 , THR M:289BINDING SITE FOR RESIDUE LDA M 413
27CC9SOFTWAREGLN H:32 , TYR H:40 , ASN H:52 , GLY H:54 , PHE H:56 , GOL H:302 , ARG M:253 , MET M:256 , GLY M:257BINDING SITE FOR RESIDUE GGD H 301
28DC1SOFTWARETRP H:21 , ALA H:25 , ILE H:28 , GGD H:301BINDING SITE FOR RESIDUE GOL H 302
29DC2SOFTWARETRP H:21 , GOL L:309BINDING SITE FOR RESIDUE GOL H 303
30DC3SOFTWAREMET H:134 , LYS H:135 , ALA H:136 , ALA H:137 , ALA H:138 , GLY H:139 , PHE H:140 , GOL H:307 , HOH H:430 , TYR M:295BINDING SITE FOR RESIDUE PO4 H 304
31DC4SOFTWAREHIS H:128 , ASN H:129 , LYS H:132BINDING SITE FOR RESIDUE GOL H 305
32DC5SOFTWAREARG H:177 , PHE H:178 , GLN H:194 , GLU H:230 , CYS H:234 , SER M:227 , ARG M:228 , GLY M:230 , ARG M:233BINDING SITE FOR RESIDUE GOL H 306
33DC6SOFTWAREALA H:138 , GLY H:139 , PHE H:140 , PO4 H:304 , HOH H:430BINDING SITE FOR RESIDUE GOL H 307

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4IN6)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Gly M:48 -Pro M:49
2Tyr H:40 -Pro H:41
3Val H:75 -Pro H:76
4Ala H:138 -Gly H:139

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IN6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IN6)

(-) Exons   (0, 0)

(no "Exon" information available for 4IN6)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain H from PDB  Type:PROTEIN  Length:240
                                                                                                                                                                                                                                                                                
               SCOP domains d4in6h1 H:11-35          d4in6h2 H:36-250 automated matches                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhh..........................eeeee....eeeee...........eee........eee..hhhhhhhhhhh.................eee.hhh...eeee.......eeee....eeeeeeeeeee....eeeeeeee.....eeeee.hhheee..eeee...hhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4in6 H  11 DLASLAIYSFWIFLAGLIYYLQTENMREGYPLENEDGTPAANQGPFPLPKPKTFILPHGRGTLTVPGPESEDRPIALARTAVSEGFPHAPTGDPMKDGVGPASWVARRDLPELDGHGHNKIKPMKAAAGFHVSAGKNPIGLPVRGCDLEIAGKVVDIWVDIPEQMARFLEVELKDGSTRLLPMQMVKVQSNRVHVNALSSDLFAGIPTIKSPTEVTLLEEDKICGYVAGGLMYAAPKRKS 250
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250

Chain L from PDB  Type:PROTEIN  Length:281
                                                                                                                                                                                                                                                                                                                         
               SCOP domains d4in6l_ L: L (light) subunit                                                                                                                                                                                                                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhh..............ee..eehhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4in6 L   1 ALLSFERKYRVPGGTLVGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWNPQLISVYPPALEYGLGGAPLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLSAANPEKGKEMRTPDHEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGING 281
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280 

Chain M from PDB  Type:PROTEIN  Length:302
                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4in6m_ M: M (medium) subunit                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eee...........hhhhh......hhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh.hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4in6 M   1 AEYQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSAALFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNHG 302
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 4)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IN6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IN6)

(-) Gene Ontology  (13, 74)

Asymmetric/Biological Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    BCL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    BPH  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CDL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FE  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GGD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    HTO  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    LDA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PC1  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SPO  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    U10  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ala H:138 - Gly H:139   [ RasMol ]  
    Gly M:48 - Pro M:49   [ RasMol ]  
    Tyr H:40 - Pro H:41   [ RasMol ]  
    Val H:75 - Pro H:76   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4in6
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  RCEH_RHOS4 | Q3J170
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  RCEH_RHOSH | P0C0Y7
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  RCEL_RHOS4 | Q3J1A5
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  RCEL_RHOSH | P0C0Y8
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  RCEM_RHOS4 | Q3J1A6
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  RCEM_RHOSH | P0C0Y9
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  RCEH_RHOS4 | Q3J170
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RCEH_RHOSH | P0C0Y7
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RCEL_RHOS4 | Q3J1A5
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RCEL_RHOSH | P0C0Y8
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RCEM_RHOS4 | Q3J1A6
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RCEM_RHOSH | P0C0Y9
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RCEH_RHOS4 | Q3J1701aig 1aij 1ds8 1dv3 1dv6 1e14 1e6d 1f6n 1fnp 1fnq 1jgw 1jgx 1jgy 1jgz 1jh0 1k6l 1k6n 1kby 1l9b 1l9j 1m3x 1mps 1ogv 1pcr 1pss 1pst 1qov 1rg5 1rgn 1rqk 1rvj 1ry5 1rzh 1rzz 1s00 1umx 1yf6 1yst 1z9j 1z9k 2bnp 2bns 2boz 2rcr 2wx5 4in5 4n7l 4rcr 5lri
        RCEH_RHOSH | P0C0Y71aig 1aij 1ds8 1dv3 1dv6 1e14 1e6d 1f6n 1fnp 1fnq 1jgw 1jgx 1jgy 1jgz 1jh0 1k6l 1k6n 1kby 1l9b 1l9j 1m3x 1mps 1ogv 1pcr 1pss 1pst 1qov 1rg5 1rgn 1rqk 1rvj 1ry5 1rzh 1rzz 1s00 1umx 1yf6 1yst 1z9j 1z9k 2bnp 2bns 2boz 2gmr 2gnu 2hg3 2hg9 2hh1 2hhk 2hit 2hj6 2j8c 2j8d 2jiy 2jj0 2rcr 2uws 2uwt 2uwu 2uwv 2uww 2ux3 2ux4 2ux5 2uxj 2uxk 2uxl 2uxm 2wx5 3dsy 3dta 3dtr 3dts 3du2 3du3 3duq 3i4d 3v3y 3v3z 3zum 3zuw 4h99 4h9l 4hbh 4hbj 4in5 4in7 4lwy 4n7k 4n7l 4rcr 4tqq 4v9g 5lse 5v33
        RCEL_RHOS4 | Q3J1A51aig 1aij 1ds8 1dv3 1dv6 1e14 1e6d 1f6n 1fnp 1fnq 1jgw 1jgx 1jgy 1jgz 1jh0 1k6l 1k6n 1kby 1l9b 1l9j 1m3x 1mps 1ogv 1pcr 1pss 1pst 1qov 1rg5 1rgn 1rqk 1rvj 1ry5 1rzh 1rzz 1s00 1umx 1yf6 1yst 1z9j 1z9k 2bnp 2bns 2boz 2gmr 2rcr 2wx5 4in5 4n7l 4rcr 5lri
        RCEL_RHOSH | P0C0Y81aig 1aij 1ds8 1dv3 1dv6 1e14 1e6d 1f6n 1fnp 1fnq 1jgw 1jgx 1jgy 1jgz 1jh0 1k6l 1k6n 1kby 1l9b 1l9j 1m3x 1mps 1ogv 1pcr 1pss 1pst 1qov 1rg5 1rgn 1rqk 1rvj 1ry5 1rzh 1rzz 1s00 1umx 1yf6 1yst 1z9j 1z9k 2bnp 2bns 2boz 2gmr 2gnu 2hg3 2hg9 2hh1 2hhk 2hit 2hj6 2j8c 2j8d 2jiy 2jj0 2rcr 2uws 2uwt 2uwu 2uwv 2uww 2ux3 2ux4 2ux5 2uxj 2uxk 2uxl 2uxm 2wx5 3dsy 3dta 3dtr 3dts 3du2 3du3 3duq 3i4d 3v3y 3v3z 3zum 3zuw 4h99 4h9l 4hbh 4hbj 4in5 4in7 4lwy 4n7k 4n7l 4rcr 4tqq 4v9g 5lse 5v33
        RCEM_RHOS4 | Q3J1A61aig 1aij 1ds8 1dv3 1dv6 1e14 1e6d 1f6n 1fnp 1fnq 1jgw 1jgx 1jgy 1jgz 1jh0 1k6l 1k6n 1kby 1l9b 1l9j 1m3x 1mps 1ogv 1pcr 1pss 1pst 1qov 1rg5 1rgn 1rqk 1rvj 1ry5 1rzh 1rzz 1s00 1umx 1yf6 1yst 1z9j 1z9k 2bnp 2bns 2boz 2rcr 2wx5 4in5 4n7l 4rcr 5lri
        RCEM_RHOSH | P0C0Y91aig 1aij 1ds8 1dv3 1dv6 1e14 1e6d 1f6n 1fnp 1fnq 1jgw 1jgx 1jgy 1jgz 1jh0 1k6l 1k6n 1kby 1l9b 1l9j 1m3x 1mps 1ogv 1pcr 1pss 1pst 1qov 1rg5 1rgn 1rqk 1rvj 1ry5 1rzh 1rzz 1s00 1umx 1yf6 1yst 1z9j 1z9k 2bnp 2bns 2boz 2gmr 2gnu 2hg3 2hg9 2hh1 2hhk 2hit 2hj6 2j8c 2j8d 2jiy 2jj0 2rcr 2uws 2uwt 2uwu 2uwv 2uww 2ux3 2ux4 2ux5 2uxj 2uxk 2uxl 2uxm 2wx5 3dsy 3dta 3dtr 3dts 3du2 3du3 3duq 3i4d 3v3y 3v3z 3zum 3zuw 4h99 4h9l 4hbh 4hbj 4in5 4in7 4lwy 4n7k 4n7l 4rcr 4tqq 4v9g 5lse 5v33

(-) Related Entries Specified in the PDB File

4in5 RESIDUE MUTATED TO G INSTEAD OF A
4in7