3I4D - JenaLib

Asymmetric Unit (73, 73)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	PHE L:97 , TRP L:100 , GLU L:104 , ILE L:117 , ALA L:120 , PHE L:121 , PHE L:123 , ALA L:124 , TYR L:148 , GLY L:149 , HIS L:153 , VAL L:241 , BCL L:602 , BCL L:604 , TYR M:210 , ALA M:213 , LEU M:214 , TRP M:252 , MET M:256	BINDING SITE FOR RESIDUE BPH L 402
02	AC2	SOFTWARE	SER L:178 , PHE L:179 , THR L:182 , HIS L:190 , LEU L:193 , VAL L:194 , GLU L:212 , ASP L:213 , PHE L:216 , TYR L:222 , SER L:223 , ILE L:224 , GLY L:225 , THR L:226 , ILE L:229 , UQ1 L:503 , LDA L:919 , LDA L:920 , PHE M:67 , LEU M:86 , PHE M:90 , BPH M:401 , SPO M:600 , BCL M:601	BINDING SITE FOR RESIDUE U10 L 502
03	AC3	SOFTWARE	TRP L:263 , TRP L:266 , U10 L:502 , HOH L:552 , HOH L:553 , LDA L:920 , LEU M:89 , PHE M:90	BINDING SITE FOR RESIDUE UQ1 L 503
04	AC4	SOFTWARE	ALA L:124 , ALA L:127 , LEU L:131 , TRP L:156 , VAL L:157 , THR L:160 , TYR L:162 , ASN L:166 , PHE L:167 , HIS L:168 , HIS L:173 , ALA L:176 , ILE L:177 , SER L:244 , CYS L:247 , MET L:248 , BPH L:402 , BCL L:604 , TYR M:210 , BCL M:601 , BCL M:603	BINDING SITE FOR RESIDUE BCL L 602
05	AC5	SOFTWARE	TYR L:128 , PHE L:146 , ILE L:150 , HIS L:153 , LEU L:154 , HOH L:289 , BPH L:402 , BCL L:602 , PHE M:197 , GLY M:203 , ILE M:206 , ALA M:207 , TYR M:210 , LEU M:214 , U10 M:501 , LDA M:903	BINDING SITE FOR RESIDUE BCL L 604
06	AC6	SOFTWARE	HIS H:126 , GLU L:72 , TYR L:73 , LYS L:82 , HOH L:339 , GOL L:730 , THR M:21 , HOH M:332	BINDING SITE FOR RESIDUE PO4 L 703
07	AC7	SOFTWARE	GLU H:94 , PHE H:96 , PHE L:24 , TRP L:25 , HOH L:333 , HOH L:381	BINDING SITE FOR RESIDUE PO4 L 705
08	AC8	SOFTWARE	TYR L:162 , GLY L:165 , ASN L:166 , ASN M:187 , GOL M:726	BINDING SITE FOR RESIDUE PO4 L 706
09	AC9	SOFTWARE	THR H:48 , GOL H:729 , MET L:139 , GLY L:140 , ALA L:141 , TYR L:144	BINDING SITE FOR RESIDUE PO4 L 708
10	BC1	SOFTWARE	ILE L:250 , TRP L:262 , GOL L:733	BINDING SITE FOR RESIDUE DIO L 711
11	BC2	SOFTWARE	SER L:52 , TYR L:67 , ALA L:81 , HOH L:311 , HOH L:477	BINDING SITE FOR RESIDUE GOL L 722
12	BC3	SOFTWARE	THR H:63 , PHE H:64 , ALA L:198 , ASN L:199 , PRO L:200 , HOH L:308 , HOH L:312 , HOH L:338 , HOH L:444	BINDING SITE FOR RESIDUE GOL L 723
13	BC4	SOFTWARE	LEU H:241 , GLY L:112 , ILE L:113 , TYR L:115 , HOH L:459 , GLU M:2 , ARG M:228	BINDING SITE FOR RESIDUE GOL L 724
14	BC5	SOFTWARE	PRO H:67 , GLY H:125 , GLU L:205 , MET L:206 , ARG L:207 , HIS L:211 , GLU M:22	BINDING SITE FOR RESIDUE GOL L 725
15	BC6	SOFTWARE	ASN L:60 , HOH L:544	BINDING SITE FOR RESIDUE GOL L 727
16	BC7	SOFTWARE	ARG H:89 , HOH H:328 , ASP L:261 , HOH L:372 , GOL L:733	BINDING SITE FOR RESIDUE GOL L 728
17	BC8	SOFTWARE	GLU L:72 , PO4 L:703	BINDING SITE FOR RESIDUE GOL L 730
18	BC9	SOFTWARE	GLY L:77 , ALA L:78 , GLY L:84 , GLN L:87 , HOH L:546	BINDING SITE FOR RESIDUE GOL L 731
19	CC1	SOFTWARE	HOH L:478	BINDING SITE FOR RESIDUE GOL L 732
20	CC2	SOFTWARE	ARG H:89 , TRP L:255 , TRP L:262 , DIO L:711 , GOL L:728 , LDA L:919	BINDING SITE FOR RESIDUE GOL L 733
21	CC3	SOFTWARE	THR H:90 , PRO L:12 , ASN L:20 , HOH L:358 , HOH L:372	BINDING SITE FOR RESIDUE GOL L 734
22	CC4	SOFTWARE	HIS L:116 , PHE L:119 , GLN M:4	BINDING SITE FOR RESIDUE GOL L 744
23	CC5	SOFTWARE	HIS H:141 , THR L:58 , ASN L:60 , LEU L:63 , HOH L:373	BINDING SITE FOR RESIDUE HT3 L 751
24	CC6	SOFTWARE	ILE L:46 , ILE L:64 , LDA L:904	BINDING SITE FOR RESIDUE HTO L 753
25	CC7	SOFTWARE	LDA H:901 , PRO L:28 , HOH L:332 , MET M:256 , GLY M:257 , PHE M:258 , HOH M:415	BINDING SITE FOR RESIDUE LDA L 902
26	CC8	SOFTWARE	LDA H:906 , TYR L:148 , HOH L:365 , HTO L:753	BINDING SITE FOR RESIDUE LDA L 904
27	CC9	SOFTWARE	ALA L:101 , ARG L:109 , TYR L:115 , LDA L:917	BINDING SITE FOR RESIDUE LDA L 905
28	DC1	SOFTWARE	GLN L:87 , THR L:90 , TRP L:142	BINDING SITE FOR RESIDUE LDA L 908
29	DC2	SOFTWARE	ILE L:91 , HOH L:314	BINDING SITE FOR RESIDUE LDA L 913
30	DC3	SOFTWARE	VAL H:92 , SER H:93 , HOH H:488 , LDA L:919	BINDING SITE FOR RESIDUE LDA L 914
31	DC4	SOFTWARE	VAL L:220 , HOH M:530 , BCL M:601 , LDA M:918	BINDING SITE FOR RESIDUE LDA L 915
32	DC5	SOFTWARE	ALA L:122 , LEU L:126 , PHE L:242 , LDA L:905	BINDING SITE FOR RESIDUE LDA L 917
33	DC6	SOFTWARE	MET L:174 , TRP L:265 , U10 L:502 , GOL L:733 , LDA L:914	BINDING SITE FOR RESIDUE LDA L 919
34	DC7	SOFTWARE	U10 L:502 , UQ1 L:503	BINDING SITE FOR RESIDUE LDA L 920
35	DC8	SOFTWARE	LEU L:234 , LEU L:235 , SER L:239 , ILE M:6	BINDING SITE FOR RESIDUE LDA L 921
36	DC9	SOFTWARE	PHE L:181 , LEU L:185 , LEU L:189 , LEU L:219 , U10 L:502 , SER M:59 , TRP M:66 , ALA M:125 , VAL M:126 , TRP M:129 , THR M:146 , ALA M:149 , PHE M:150 , ALA M:153 , THR M:277 , BCL M:601 , BCL M:603	BINDING SITE FOR RESIDUE BPH M 401
37	EC1	SOFTWARE	HIS L:190 , HIS L:230 , HIS M:219 , GLU M:234 , HIS M:266	BINDING SITE FOR RESIDUE FE M 500
38	EC2	SOFTWARE	PHE L:29 , GLY L:35 , PHE L:39 , ALA L:42 , ALA L:43 , ALA L:50 , ARG L:103 , BCL L:604 , HIS M:219 , THR M:222 , ALA M:248 , ALA M:249 , TRP M:252 , MET M:256 , ASN M:259 , ALA M:260 , THR M:261 , ILE M:265	BINDING SITE FOR RESIDUE U10 M 501
39	EC3	SOFTWARE	U10 L:502 , PHE M:67 , ILE M:70 , GLY M:71 , TRP M:75 , SER M:119 , PHE M:120 , TRP M:157 , TRP M:171 , HIS M:182 , BCL M:601	BINDING SITE FOR RESIDUE SPO M 600
40	EC4	SOFTWARE	HIS L:168 , MET L:174 , ILE L:177 , SER L:178 , THR L:182 , HOH L:284 , U10 L:502 , BCL L:602 , LDA L:915 , MET M:122 , ILE M:179 , HIS M:182 , LEU M:183 , THR M:186 , BPH M:401 , SPO M:600 , BCL M:603	BINDING SITE FOR RESIDUE BCL M 601
41	EC5	SOFTWARE	VAL L:157 , TYR L:162 , BCL L:602 , ALA M:153 , LEU M:156 , THR M:186 , ASN M:187 , SER M:190 , LEU M:196 , PHE M:197 , HIS M:202 , SER M:205 , ILE M:206 , TYR M:210 , VAL M:276 , GLY M:280 , ILE M:284 , BPH M:401 , BCL M:601 , LDA M:918	BINDING SITE FOR RESIDUE BCL M 603
42	EC6	SOFTWARE	HOH H:481 , HOH H:483 , VAL M:192 , ASP M:292	BINDING SITE FOR RESIDUE K M 701
43	EC7	SOFTWARE	TYR H:30 , ARG M:267 , TRP M:271 , CDL M:800	BINDING SITE FOR RESIDUE CL M 702
44	EC8	SOFTWARE	ASN M:28 , GLY M:53 , SER M:54 , HOH M:383 , HOH M:384 , HOH M:425 , HOH M:426 , HOH M:431	BINDING SITE FOR RESIDUE PO4 M 704
45	EC9	SOFTWARE	GLU M:173 , TRP M:185 , PHE M:189 , GOL M:740	BINDING SITE FOR RESIDUE PO4 M 707
46	FC1	SOFTWARE	TYR L:162 , PO4 L:706 , LEU M:191 , HOH M:331 , HOH M:338	BINDING SITE FOR RESIDUE GOL M 726
47	FC2	SOFTWARE	HOH L:369 , SER M:30 , GLY M:31 , HOH M:309 , HOH M:529 , HOH M:531	BINDING SITE FOR RESIDUE GOL M 737
48	FC3	SOFTWARE	SER M:172 , GLU M:173 , PO4 M:707 , GOL M:742	BINDING SITE FOR RESIDUE GOL M 740
49	FC4	SOFTWARE	TYR M:3 , GLN M:4 , ASN M:5 , ILE M:6 , PHE M:7 , HOH M:351 , HOH M:385	BINDING SITE FOR RESIDUE GOL M 741
50	FC5	SOFTWARE	GLU M:95 , PRO M:96 , PRO M:97 , PRO M:99 , SER M:172 , HOH M:376 , HOH M:430 , GOL M:740	BINDING SITE FOR RESIDUE GOL M 742
51	FC6	SOFTWARE	PHE H:23 , GLY H:26 , TYR H:30 , ASN L:199 , PRO L:200 , GLY M:143 , LYS M:144 , HIS M:145 , TRP M:148 , ARG M:267 , LEU M:278 , HOH M:443 , HOH M:453 , CL M:702	BINDING SITE FOR RESIDUE CDL M 800
52	FC7	SOFTWARE	HOH H:280 , LDA H:901 , LDA H:910 , BCL L:604 , PRO M:200 , LEU M:204 , TRP M:268	BINDING SITE FOR RESIDUE LDA M 903
53	FC8	SOFTWARE	PHE M:7 , LEU M:38	BINDING SITE FOR RESIDUE LDA M 907
54	FC9	SOFTWARE	LEU M:167 , MET M:168 , GLY M:288 , THR M:289	BINDING SITE FOR RESIDUE LDA M 911
55	GC1	SOFTWARE	PHE M:105 , ALA M:107	BINDING SITE FOR RESIDUE LDA M 912
56	GC2	SOFTWARE	SER M:128 , GLN M:138	BINDING SITE FOR RESIDUE LDA M 916
57	GC3	SOFTWARE	LDA L:915 , ILE M:50 , BCL M:603	BINDING SITE FOR RESIDUE LDA M 918
58	GC4	SOFTWARE	MET H:134 , ALA H:137 , PHE H:140 , HOH H:336 , HOH H:338	BINDING SITE FOR RESIDUE K H 700
59	GC5	SOFTWARE	LYS H:146 , VAL H:198 , GLN H:199 , SER H:200 , HOH H:432 , GOL H:746	BINDING SITE FOR RESIDUE PO4 H 709
60	GC6	SOFTWARE	ARG H:177 , PHE H:178 , PRO H:192 , GLN H:194 , CYS H:234 , SER M:227 , ARG M:228 , GLY M:230 , ARG M:233 , HOH M:327	BINDING SITE FOR RESIDUE GOL H 721
61	GC7	SOFTWARE	ASN H:44 , THR H:48 , PRO H:49 , PO4 L:708	BINDING SITE FOR RESIDUE GOL H 729
62	GC8	SOFTWARE	MET H:242 , HOH H:345 , PRO L:12 , GLY L:13	BINDING SITE FOR RESIDUE GOL H 735
63	GC9	SOFTWARE	GLN H:199 , ARG H:202 , HOH H:487 , GOL H:746	BINDING SITE FOR RESIDUE GOL H 736
64	HC1	SOFTWARE	GLU H:38 , THR H:74 , VAL H:75 , GLY H:77 , PRO H:78 , GLU H:79 , HOH H:276 , HOH H:409 , ARG M:241	BINDING SITE FOR RESIDUE GOL H 738
65	HC2	SOFTWARE	ILE H:160 , SER H:210 , HTO H:752	BINDING SITE FOR RESIDUE GOL H 739
66	HC3	SOFTWARE	HIS H:128 , ASN H:129 , LYS H:132 , HOH H:438	BINDING SITE FOR RESIDUE GOL H 743
67	HC4	SOFTWARE	ARG H:154 , LYS H:197 , GLN H:199 , HIS H:204 , ASN H:206 , HOH H:486 , HOH H:535 , ALA M:1	BINDING SITE FOR RESIDUE GOL H 745
68	HC5	SOFTWARE	GLN H:199 , SER H:200 , ASN H:201 , PO4 H:709 , GOL H:736	BINDING SITE FOR RESIDUE GOL H 746
69	HC6	SOFTWARE	GLY H:162 , GLU H:182 , LEU H:183 , LYS H:184 , GOL H:739	BINDING SITE FOR RESIDUE HTO H 752
70	HC7	SOFTWARE	GLN H:32 , TYR H:40 , LDA H:910 , LDA L:902 , ARG M:253 , PHE M:258 , HOH M:415 , LDA M:903	BINDING SITE FOR RESIDUE LDA H 901
71	HC8	SOFTWARE	TRP H:21 , LDA H:910 , LDA L:904	BINDING SITE FOR RESIDUE LDA H 906
72	HC9	SOFTWARE	ALA H:25 , TYR H:29 , LDA H:910	BINDING SITE FOR RESIDUE LDA H 909
73	IC1	SOFTWARE	TYR H:18 , TRP H:21 , LDA H:901 , LDA H:906 , LDA H:909 , LDA M:903	BINDING SITE FOR RESIDUE LDA H 910

SS Bonds (0, 0)

Cis Peptide Bonds (5, 5)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain H from PDB  Type:PROTEIN  Length:239
 aligned with RCEH_RHOSH | P0C0Y7 from UniProtKB/Swiss-Prot  Length:260

    Alignment length:239
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239         
           RCEH_RHOSH    10 FDLASLAIYSFWIFLAGLIYYLQTENMREGYPLENEDGTPAANQGPFPLPKPKTFILPHGRGTLTVPGPESEDRPIALARTAVSEGFPHAPTGDPMKDGVGPASWVARRDLPELDGHGHNKIKPMKAAAGFHVSAGKNPIGLPVRGCDLEIAGKVVDIWVDIPEQMARFLEVELKDGSTRLLPMQMVKVQSNRVHVNALSSDLFAGIPTIKSPTEVTLLEEDKICGYVAGGLMYAAPKR 248
               SCOP domains d3i4dh1 H:10-35           d3i4dh2 H:36-248 Photosynthetic reaction centre                                                                                                                                                                       SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh..........................eeeeehhhheeeee...........eee........eee..hhhhhhhhhhh.................eee.hhh...eeee.......eeee....eeeeeeeeeee....eeeeeeeee....eeeee.hhhee....eee...hhhhh............hhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i4d H  10 FDLASLAIYSFWIFLAGLIYYLQTENMREGYPLENEDGTPAANQGPFPLPKPKTFILPHGRGTLTVPGPESEDRPIALARTAVSEGFPHAPTGDPMKDGVGPASWVARRDLPELDGHGHNKIKPMKAAAGFHVSAGKNPIGLPVRGCDLEIAGKVVDIWVDIPEQMARFLEVELKDGSTRLLPMQMVKVQSNRVHVNALSSDLFAGIPTIKSPTEVTLLEEDKICGYVAGGLMYAAPKR 248
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239

Chain L from PDB  Type:PROTEIN  Length:281
 aligned with RCEL_RHOSH | P0C0Y8 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:281
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 
           RCEL_RHOSH     2 ALLSFERKYRVPGGTLVGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWNPQLISVYPPALEYGLGGAPLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLSAANPEKGKEMRTPDHEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGING 282
               SCOP domains d3i4dl_ L: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhh..............ee..eehhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------REACTION_CENTER            ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i4d L   1 ALLSFERKYRVPGGTLVGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWNPQLISVYPPALEYGLGGAPLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLSAANPEKGKEMRTPDHEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGING 281
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280

Chain M from PDB  Type:PROTEIN  Length:302
 aligned with RCEM_RHOSH | P0C0Y9 from UniProtKB/Swiss-Prot  Length:308

    Alignment length:302
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301  
           RCEM_RHOSH     2 AEYQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNHG 303
               SCOP domains d3i4dm_ M: automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eee...........hhhhh......hhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.....hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh.hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------REACTION_CENTER            --------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i4d M   1 AEYQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNHG 302
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (3, 4)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (13, 37)

Asymmetric/Biological Unit(hide GO term definitions)

Chain H (RCEH_RHOSH | P0C0Y7)

molecular function
	GO:0042314	bacteriochlorophyll binding	Interacting selectively and non-covalently with bacteriochlorophyll, a form of chlorophyll found in photosynthetic bacteria, such as the purple and green bacteria. There are several types, designated a to g. Bacteriochlorophyll a and bacteriochlorophyll b are structurally similar to the chlorophyll a and chlorophyll b found in plants.
	GO:0016168	chlorophyll binding	Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0015979	photosynthesis	The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
	GO:0019684	photosynthesis, light reaction	The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.
	GO:0018298	protein-chromophore linkage	The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0030077	plasma membrane light-harvesting complex	A plasma membrane protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center. Examples of this complex are found in bacterial species.
	GO:0042717	plasma membrane-derived chromatophore membrane	The lipid bilayer associated with a plasma membrane-derived chromatophore; surrounds chromatophores that form complete vesicles.

Chain L (RCEL_RHOSH | P0C0Y8)

molecular function
	GO:0042314	bacteriochlorophyll binding	Interacting selectively and non-covalently with bacteriochlorophyll, a form of chlorophyll found in photosynthetic bacteria, such as the purple and green bacteria. There are several types, designated a to g. Bacteriochlorophyll a and bacteriochlorophyll b are structurally similar to the chlorophyll a and chlorophyll b found in plants.
	GO:0016168	chlorophyll binding	Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0015979	photosynthesis	The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
	GO:0019684	photosynthesis, light reaction	The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.
	GO:0009772	photosynthetic electron transport in photosystem II	A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, Q) through a chain of electron transport molecules in the thylakoid membrane until they reach the ultimate electron acceptor of Photosystem II, which is plastocyanin (PC). The electron is then passed to the P700 chlorophyll a molecules of the reaction centre of photosystem I.
	GO:0018298	protein-chromophore linkage	The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0030077	plasma membrane light-harvesting complex	A plasma membrane protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center. Examples of this complex are found in bacterial species.
	GO:0042717	plasma membrane-derived chromatophore membrane	The lipid bilayer associated with a plasma membrane-derived chromatophore; surrounds chromatophores that form complete vesicles.

Chain M (RCEM_RHOSH | P0C0Y9)

molecular function
	GO:0042314	bacteriochlorophyll binding	Interacting selectively and non-covalently with bacteriochlorophyll, a form of chlorophyll found in photosynthetic bacteria, such as the purple and green bacteria. There are several types, designated a to g. Bacteriochlorophyll a and bacteriochlorophyll b are structurally similar to the chlorophyll a and chlorophyll b found in plants.
	GO:0016168	chlorophyll binding	Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0015979	photosynthesis	The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
	GO:0019684	photosynthesis, light reaction	The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.
	GO:0009772	photosynthetic electron transport in photosystem II	A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, Q) through a chain of electron transport molecules in the thylakoid membrane until they reach the ultimate electron acceptor of Photosystem II, which is plastocyanin (PC). The electron is then passed to the P700 chlorophyll a molecules of the reaction centre of photosystem I.
	GO:0018298	protein-chromophore linkage	The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0030077	plasma membrane light-harvesting complex	A plasma membrane protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center. Examples of this complex are found in bacterial species.
	GO:0042717	plasma membrane-derived chromatophore membrane	The lipid bilayer associated with a plasma membrane-derived chromatophore; surrounds chromatophores that form complete vesicles.

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	Cis Peptide Bonds
		Gly M:48 - Pro M:49	[ RasMol ]
		Lys H:247 - Arg H:248	[ RasMol ]
		Pro H:246 - Lys H:247	[ RasMol ]
		Tyr H:40 - Pro H:41	[ RasMol ]
		Val H:75 - Pro H:76	[ RasMol ]

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (15, 73)

Sites (73, 73)

SS Bonds (0, 0)

Cis Peptide Bonds (5, 5)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (3, 4)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (13, 37)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File