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(-) Description

Title :  CRYSTAL STRUCTURE OF STING CTD
 
Authors :  S. Ouyang, H. Ru, N. Shaw, Y. Jiang, F. Niu, Y. Zhu, W. Qiu, Y. Li, Z. -J. Liu
Date :  29 Mar 12  (Deposition) - 16 May 12  (Release) - 03 Jul 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.45
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Sting/Mita/Eris/Mpys/Tmem173, Innate Immune System, Type I Interferon, Dimerization, C-Di-Gmp, 5 Helices And 5 Strands In Single Domain, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Ouyang, X. Song, Y. Wang, H. Ru, N. Shaw, Y. Jiang, F. Niu, Y. Zhu, W. Qiu, K. Parvatiyar, Y. Li, R. Zhang, G. Cheng, Z. J. Liu
Structural Analysis Of The Sting Adaptor Protein Reveals A Hydrophobic Dimer Interface And Mode Of Cyclic Di-Gmp Binding
Immunity V. 36 1073 2012
PubMed-ID: 22579474  |  Reference-DOI: 10.1016/J.IMMUNI.2012.03.019

(-) Compounds

Molecule 1 - TRANSMEMBRANE PROTEIN 173
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: C-TERMINAL DOMAIN
    Gene: STING/MITA/ERIS/MPYS/TMEM173
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ENDOPLASMIC RETICULUM INTERFERON STIMULATOR, ERIS, MEDIATOR OF IRF3 ACTIVATION, HMITA, STIMULATOR OF INTERFERON GENES PROTEIN, HSTING

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4EF5)

(-) Sites  (0, 0)

(no "Site" information available for 4EF5)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EF5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4EF5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EF5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EF5)

(-) Exons   (0, 0)

(no "Exon" information available for 4EF5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:177
                                                                                                                                                                                                                 
               SCOP domains d4ef5a_ A: Tyrosinase cofactor MelC1                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeee.......hhhhh...eeeeee.....eeeeeee..eeeeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.......eeeeee.......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ef5 A 152 NFNVAHGLAWSYYIGYLRLILPELQARIRTYNQHYNNLLRGAVSQRLYILLPLDCGVPDNLSMADPNIRFLDKLPYSNSIYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLEDILADAPESQNNCRLIAYQEPASSFSLSQEVLRHLRQEEKEEVTV 343
                                   161       171       181       191       201       211       221    || 244       254       264       274       284       294       304       314   ||  326       336       
                                                                                                    226|                                                                           318|                      
                                                                                                     240                                                                            321
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EF5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EF5)

(-) Gene Ontology  (36, 36)

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  4ef5
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  STING_HUMAN | Q86WV6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        STING_HUMAN | Q86WV6: 4ef4 4emt 4emu 4f5d 4f5e 4f5w 4f5y 4f9e 4f9g 4ksy 4loh 4loi 4qxo 4qxp 4qxq 4qxr 5bqx 5jej

(-) Related Entries Specified in the PDB File

4ef4