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(-) Description

Title :  CRYSTAL STRUCTURE OF HSTING(GROUP2) IN COMPLEX WITH DMXAA
 
Authors :  P. Gao, D. J. Patel
Date :  21 Jul 14  (Deposition) - 10 Sep 14  (Release) - 08 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.88
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Immune System, Innate Immunity, Cgamp Binding, Membrane (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Gao, T. Zillinger, W. Wang, M. Ascano, P. Dai, G. Hartmann, T. Tuschl L. Deng, W. Barchet, D. J. Patel
Binding-Pocket And Lid-Region Substitutions Render Human Sting Sensitive To The Species-Specific Drug Dmxaa.
Cell Rep V. 8 1668 2014
PubMed-ID: 25199835  |  Reference-DOI: 10.1016/J.CELREP.2014.08.010

(-) Compounds

Molecule 1 - STIMULATOR OF INTERFERON GENES PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: C-TERMINAL DOMAIN (UNP RESIDUES 155-341)
    Gene: TMEM173, ERIS, MITA, STING
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HSTING, ENDOPLASMIC RETICULUM INTERFERON STIMULATOR, ERIS, MEDIATOR OF IRF3 ACTIVATION, HMITA, TRANSMEMBRANE PROTEIN 173

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
11YE1Ligand/Ion(5,6-DIMETHYL-9-OXO-9H-XANTHEN-4-YL)ACETIC ACID
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
11YE2Ligand/Ion(5,6-DIMETHYL-9-OXO-9H-XANTHEN-4-YL)ACETIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:162 , GLY A:166 , TYR A:167 , ARG A:238 , THR A:263 , PRO A:264 , THR A:267 , HOH A:503 , HOH A:506BINDING SITE FOR RESIDUE 1YE A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QXO)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Ser A:305 -Gln A:306

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QXO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QXO)

(-) Exons   (0, 0)

(no "Exon" information available for 4QXO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhh.....eeeeee.......hhhhhh..eeeeee...eee.......eee..eeeeeee..eeeeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh......eeeeee.........hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qxo A 154 SVAHGLAWSYYIGYLRLILPELQARIRTYNQHYNNLLRGAVSQRLYILLPLDCGVPDNLSMADPNIRFRDMLPQQNIDRAGIKNRVYSNSVYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLEDILADAPESQNNCRLIAYQEPADDSSFSLSQEVLRHLRQ 335
                                   163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QXO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QXO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QXO)

(-) Gene Ontology  (36, 36)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        STING_HUMAN | Q86WV6: 4ef4 4ef5 4emt 4emu 4f5d 4f5e 4f5w 4f5y 4f9e 4f9g 4ksy 4loh 4loi 4qxp 4qxq 4qxr 5bqx 5jej

(-) Related Entries Specified in the PDB File

4qxp 4qxq 4qxr