Chain A from PDB Type:PROTEIN Length:108
aligned with BRD2_HUMAN | P25440 from UniProtKB/Swiss-Prot Length:801
Alignment length:108
357 367 377 387 397 407 417 427 437 447
BRD2_HUMAN 348 EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhh..hhhhhhhhh...hhhhhh..hhhhhh....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (1) ----------------BROMODOMAIN_2 PDB: A:364-436 UniProt: 364-436 ------------------- PROSITE (1)
PROSITE (2) ---------------------BROMODOMAIN_1 PDB: A:369-428 UniProt: 369-428 --------------------------- PROSITE (2)
Transcript 1 Exon 1.20b PDB: A:348-400 UniProt: 276-400 Exon 1.20g PDB: A:401-443 UniProt: 401-443Exon 1.21b Transcript 1
2e3k A 348 EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
357 367 377 387 397 407 417 427 437 447
Chain B from PDB Type:PROTEIN Length:110
aligned with BRD2_HUMAN | P25440 from UniProtKB/Swiss-Prot Length:801
Alignment length:118
347 357 367 377 387 397 407 417 427 437 447
BRD2_HUMAN 338 HQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .h--------hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh..hhhhhh....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --------------------------BROMODOMAIN_2 PDB: B:364-436 UniProt: 364-436 ------------------- PROSITE (1)
PROSITE (2) -------------------------------BROMODOMAIN_1 PDB: B:369-428 UniProt: 369-428 --------------------------- PROSITE (2)
Transcript 1 Exon 1.20b PDB: B:1-400 (gaps) UniProt: 276-400 [INCOMPLETE] Exon 1.20g PDB: B:401-443 UniProt: 401-443Exon 1.21b Transcript 1
2e3k B 1 HM--------EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
| -| 357 367 377 387 397 407 417 427 437 447
2 348
Chain C from PDB Type:PROTEIN Length:108
aligned with BRD2_HUMAN | P25440 from UniProtKB/Swiss-Prot Length:801
Alignment length:108
357 367 377 387 397 407 417 427 437 447
BRD2_HUMAN 348 EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhh..hhhhhhhhh...hhhhhh..hhhhhh....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (1) ----------------BROMODOMAIN_2 PDB: C:364-436 UniProt: 364-436 ------------------- PROSITE (1)
PROSITE (2) ---------------------BROMODOMAIN_1 PDB: C:369-428 UniProt: 369-428 --------------------------- PROSITE (2)
Transcript 1 Exon 1.20b PDB: C:348-400 UniProt: 276-400 Exon 1.20g PDB: C:401-443 UniProt: 401-443Exon 1.21b Transcript 1
2e3k C 348 EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
357 367 377 387 397 407 417 427 437 447
Chain D from PDB Type:PROTEIN Length:109
aligned with BRD2_HUMAN | P25440 from UniProtKB/Swiss-Prot Length:801
Alignment length:110
355 365 375 385 395 405 415 425 435 445 455
BRD2_HUMAN 346 LSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author h-hhhhhhhhhhhhhhh..hhhhhhhhh...hhhhhh..hhhhhh....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ------------------BROMODOMAIN_2 PDB: D:364-436 UniProt: 364-436 ------------------- PROSITE (1)
PROSITE (2) -----------------------BROMODOMAIN_1 PDB: D:369-428 UniProt: 369-428 --------------------------- PROSITE (2)
Transcript 1 Exon 1.20b PDB: D:2-400 (gaps) UniProt: 276-400 Exon 1.20g PDB: D:401-443 UniProt: 401-443Exon 1.21b Transcript 1
2e3k D 2 M-EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
| | 355 365 375 385 395 405 415 425 435 445 455
2 |
348
Chain Q from PDB Type:PROTEIN Length:15
aligned with H4_YEAST | P02309 from UniProtKB/Swiss-Prot Length:103
Alignment length:15
11
H4_YEAST 2 SGRGKGGKGLGKGGA 16
SCOP domains --------------- SCOP domains
CATH domains --------------- CATH domains
Pfam domains --------------- Pfam domains
Sec.struct. author ............... Sec.struct. author
SAPs(SNPs) --------------- SAPs(SNPs)
PROSITE -------------HI PROSITE
Transcript 2 Exon 2.1 Transcript 2
2e3k Q 1 SGRGkGGKGLGkGGA 15
| 10 |
5-ALY 12-ALY
Chain R from PDB Type:PROTEIN Length:13
aligned with H4_YEAST | P02309 from UniProtKB/Swiss-Prot Length:103
Alignment length:13
13
H4_YEAST 4 RGKGGKGLGKGGA 16
SCOP domains ------------- SCOP domains
CATH domains ------------- CATH domains
Pfam domains ------------- Pfam domains
Sec.struct. author ............. Sec.struct. author
SAPs(SNPs) ------------- SAPs(SNPs)
PROSITE -----------HI PROSITE
Transcript 2 Exon 2.1 Transcript 2
2e3k R 3 RGkGGKGLGkGGA 15
| 12
5-ALY 12-ALY
Legend: |
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |