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(-)Asym./Biol. Unit
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(-) Description

Title :  ADENOVIRUS FIBRE SHAFT SEQUENCE N-TERMINALLY FUSED TO THE BACTERIOPHAGE T4 FIBRITIN FOLDON TRIMERISATION MOTIF WITH A LONG LINKER
 
Authors :  K. Papanikolopoulou, S. Teixeira, H. Belrhali, V. T. Forsyth, A. Mitra M. J. Van Raaij
Date :  16 Apr 04  (Deposition) - 30 Jul 04  (Release) - 15 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Adenovirus, Chimera, Fiber Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Papanikolopoulou, S. Teixeira, H. Belrhali, V. T. Forsyth, A. Mitraki, M. J. Van Raaij
Adenovirus Fibre Shaft Sequences Fold Into The Native Tripl Beta-Spiral Fold When N-Terminally Fused To The Bacteriophage T4 Fibritin Foldon Trimerisation Motif
J. Mol. Biol. V. 342 219 2004
PubMed-ID: 15313619  |  Reference-DOI: 10.1016/J.JMB.2004.07.008
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FIBRITIN, FIBER PROTEIN
    Atcc: VR-846 AND 11303-B4
    Chains: A, B, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PT7.7
    Expression System Strain: JM109(DE3)
    Expression System Taxid: 562
    Fragment: SHAFT DOMAIN PLUS FOLDON DOMAIN, RESIDUES 319-392 AND 457- 483
    Organism Scientific: HUMAN ADENOVIRUS C, ENTEROBACTERIA PHAGE T4
    Organism Taxid: 129951, 10665
    Other Details: ARTIFICIAL FUSION PROTEIN OF ADENOVIRUS TYPE 2 FIBRE SHAFT RESIDUES 319-398 - BACTERIOPHAGE T4 FIBRITIN FOLDON RESIDUES 457-483 WITH A GLY-SER LINKER IN BETWEEN
    Synonym: ARTIFICAL FUSION OF ADENOVIRUS FIBRE SHAFT WITH BACTERIOPHAGE T4 FIBRITIN FOLDON, WHISKER ANTIGEN CONTROL PROTEIN, COLLAR PROTEIN

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1V1I)

(-) Sites  (0, 0)

(no "Site" information available for 1V1I)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1V1I)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Ser A:351 -Pro A:352
2Ser B:351 -Pro B:352
3Ser C:351 -Pro C:352

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1V1I)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1V1I)

(-) Exons   (0, 0)

(no "Exon" information available for 1V1I)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:102
 aligned with SPIKE_ADE02 | P03275 from UniProtKB/Swiss-Prot  Length:582

    Alignment length:252
                                   328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568  
          SPIKE_ADE02   319 VSIKKSSGLNFDNTAIAINAGKGLEFDTNTSESPDINPIKTKIGSGIDYNENGAMITKLGAGLSFDNSGAITIGNKNDDKLTLWTTPDPSPNCRIHSDNDCKFTLVLTKCGSQVLATVAALAVSGDLSSMTGTVASVSIFLRFDQNGVLMENSSLKKHYWNFRNGNSTNANPYTNAVGFMPNLLAYPKTQSQTAKNNIVSQVYLHGDKTKPMILTITLNGTSESTETSEVSTYSMSFTWSWESGKYTTETFA 570
               SCOP domains d1v1ia1 A:319-393 Adenovirus                                               ------------------------------------------------------------------------------------------------------d1v1          ia2 A   :457-483             F                 ibrit      in  SCOP domains
               CATH domains 1v1iA01 A:319-392 reovirus attachment protein sigma1; domain 1            ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhh.eeee..eeee.....eee............eee.....eee.....eee.....eee.....eee..------------------------------------------------------------------------------------------------------....----------.....---..eeeee.------------.e-----------------eee.h------hhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1v1i A 319 VSIKKSSGLNFDNTAIAINAGKGLEFDTNTSESPDINPIKTKIGSGIDYNENGAMITKLGAGLSFDNSGAITIGN------------------------------------------------------------------------------------------------------GYIP----------EAPRD---GQAYVRKD------------GE-----------------WVLLS------TFL 483
                                   328       338       348       358       368       378       388    |    -         -         -         -         -         -         -         -         -         -       459|        - |   | 466      |  -       474|        -       477  |    481  
                                                                                                    393                                                                                                    457  |        461 465 466    473          474|               476 480    481  
                                                                                                                                                                                                              460                                     475                               


Chain A from PDB  Type:PROTEIN  Length:102
 aligned with WAC_BPT4 | P10104 from UniProtKB/Swiss-Prot  Length:487

    Alignment length:399
                                    95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475         
             WAC_BPT4    86 VSGDIEALAQIGINKKDISDLKTLTSEHTEILNGTNNTVDSILADIGPFNAEANSVYRTIRNDLLWIKRELGQYTGQDINGLPVVGNPSSGMKHRIINNTDVITSQGIRLSELETKFIESDVGSLTIEVGNLREELGPKPPSFSQNVYSRLNEIDTKQTTVESDISAIKTSIGYPGNNSIITSVNTNTDNIASINLELNQSGGIKQRLTVIETSIGSDDIPSSIKGQIKDNTTSIESLNGIVGENTSSGLRANVSWLNQIVGTDSSGGQPSPPGSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL 484
               SCOP domains d1          v1i                                                                         a1 A:   319-393 Adenov                                          irus                                                                                                                                                   ---------------------------------------------------------------------d1v1ia2 A:457-483 Fibritin  SCOP domains
               CATH domains 1v          1iA                                                                         01 A:   319-392 reovir                                          us at tachment protei n                    sigma1;        domain                                1                                                     ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..----------.hh-------------------------------------------------------------------------hh.ee---ee..eeee.....e------------------------------------------ee...-.........eee...-..-------------------eee....-------.eee...-------------------------------..e-----------ee....------------------------------.eee..---------------------------------------------------------------------...........eeeee..eeee.hhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v1i A 319 VS----------IKK-------------------------------------------------------------------------SSGLN---FDNTAIAINAGKGL------------------------------------------EFDTN-TSESPDINPIKTKIG-SG-------------------IDYNENG-------AMITKLG-------------------------------AGL-----------SFDNSG------------------------------AITIGN---------------------------------------------------------------------GYIPEAPRDGQAYVRKDGEWVLLSTFL 483
                             |       -  | |    -         -         -         -         -         -         -       325  |   |332       342         -         -         -         -  |   |349       359  | ||   -         -     | 369 |     372     |   -         -         -       381         - |    |  -         -         -       390  |      -         -         -         -         -         -         -  |    464       474         
                             |        321 |                                                                       324 328 329          342                                        343 347 |           362 ||                 365   371     372   378                             379 |         382  387                            388  393                                                                   457                          
                           320          323                                                                                                                                             348             363|                                                                       381                                                                                                                                                     
                                                                                                                                                                                                         364                                                                                                                                                                                                                               


Chain B from PDB  Type:PROTEIN  Length:100
 aligned with SPIKE_ADE02 | P03275 from UniProtKB/Swiss-Prot  Length:582

    Alignment length:141
                                   328       338       348       358       368       378       388       398       408       418       428       438       448       458 
          SPIKE_ADE02   319 VSIKKSSGLNFDNTAIAINAGKGLEFDTNTSESPDINPIKTKIGSGIDYNENGAMITKLGAGLSFDNSGAITIGNKNDDKLTLWTTPDPSPNCRIHSDNDCKFTLVLTKCGSQVLATVAALAVSGDLSSMTGTVASVSIFL 459
               SCOP domains d1v1ib1 B:319-392 Adenovirus                                              ----------d1v1ib2 B:458-483 Fibrit                               in SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhh.eeee..eeee.....eee............eee.....eee.....eee.....eee.....eee.----------...........eeee..eeee.hh-------------------------------h. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v1i B 319 VSIKKSSGLNFDNTAIAINAGKGLEFDTNTSESPDINPIKTKIGSGIDYNENGAMITKLGAGLSFDNSGAITIG----------YIPEAPRDGQAYVRKDGEWVLLST-------------------------------FL 483
                                   328       338       348       358       368       378       388   |     -    |  463       473       | -         -         -       482 
                                                                                                   392        458                    481                             482 


Chain B from PDB  Type:PROTEIN  Length:100
 aligned with WAC_BPT4 | P10104 from UniProtKB/Swiss-Prot  Length:487

    Alignment length:399
                                    95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475         
             WAC_BPT4    86 VSGDIEALAQIGINKKDISDLKTLTSEHTEILNGTNNTVDSILADIGPFNAEANSVYRTIRNDLLWIKRELGQYTGQDINGLPVVGNPSSGMKHRIINNTDVITSQGIRLSELETKFIESDVGSLTIEVGNLREELGPKPPSFSQNVYSRLNEIDTKQTTVESDISAIKTSIGYPGNNSIITSVNTNTDNIASINLELNQSGGIKQRLTVIETSIGSDDIPSSIKGQIKDNTTSIESLNGIVGENTSSGLRANVSWLNQIVGTDSSGGQPSPPGSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL 484
               SCOP domains d1          v1i                                                                         b1 B:   319-392 Adenov                                          irus                                                                                                                                                  -----------------------------------------------------------------------d1v1ib2 B:458-483 Fibritin SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..----------.hh-------------------------------------------------------------------------hh.ee---ee..eeee.....e------------------------------------------ee...-.........eee...-..-------------------eee....-------.eee...-------------------------------..e-----------ee....------------------------------.eee.-----------------------------------------------------------------------...........eeee..eeee.hhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v1i B 319 VS----------IKK-------------------------------------------------------------------------SSGLN---FDNTAIAINAGKGL------------------------------------------EFDTN-TSESPDINPIKTKIG-SG-------------------IDYNENG-------AMITKLG-------------------------------AGL-----------SFDNSG------------------------------AITIG-----------------------------------------------------------------------YIPEAPRDGQAYVRKDGEWVLLSTFL 483
                             |       -  | |    -         -         -         -         -         -         -       325  |   |332       342         -         -         -         -  |   |349       359  | ||   -         -     | 369 |     372     |   -         -         -       381         - |    |  -         -         -       390 |       -         -         -         -         -         -         -   |   464       474         
                           320        321 |                                                                       324 328 329          342                                        343 347 |           362 ||                 365   371     372   378                             379 |         382  387                            388 392                                                                     458                         
                                        323                                                                                                                                             348             363|                                                                       381                                                                                                                                                     
                                                                                                                                                                                                         364                                                                                                                                                                                                                               


Chain C from PDB  Type:PROTEIN  Length:98
 aligned with SPIKE_ADE02 | P03275 from UniProtKB/Swiss-Prot  Length:582

    Alignment length:141
                                   328       338       348       358       368       378       388       398       408       418       428       438       448       458 
          SPIKE_ADE02   319 VSIKKSSGLNFDNTAIAINAGKGLEFDTNTSESPDINPIKTKIGSGIDYNENGAMITKLGAGLSFDNSGAITIGNKNDDKLTLWTTPDPSPNCRIHSDNDCKFTLVLTKCGSQVLATVAALAVSGDLSSMTGTVASVSIFL 459
               SCOP domains d1v1ic1 C:319-391 Adenovirus                                             ------------d1v1ic2 C:459-483                                        SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------------------------------------------------------------------------------------Fibritin_C-1v1iC01     ------------------------------- - Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------------------Fibritin_C-1v1iC02     ------------------------------- - Pfam domains (2)
           Pfam domains (3) -------------------------------------------------------------------------------------Fibritin_C-1v1iC03     ------------------------------- - Pfam domains (3)
         Sec.struct. author ...hhhh.eeee..eeee.....eee............eee.....eee.....eee......ee.....ee.------------..........eeee..eeee...-------------------------------.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v1i C 319 VSIKKSSGLNFDNTAIAINAGKGLEFDTNTSESPDINPIKTKIGSGIDYNENGAMITKLGAGLSFDNSGAITI------------IPEAPRDGQAYVRKDGEWVLLST-------------------------------FL 483
                                   328       338       348       358       368       378       388  |      -     | 463       473       | -         -         -       482 
                                                                                                  391          459                   481                             482 


Chain C from PDB  Type:PROTEIN  Length:98
 aligned with WAC_BPT4 | P10104 from UniProtKB/Swiss-Prot  Length:487

    Alignment length:399
                                    95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475         
             WAC_BPT4    86 VSGDIEALAQIGINKKDISDLKTLTSEHTEILNGTNNTVDSILADIGPFNAEANSVYRTIRNDLLWIKRELGQYTGQDINGLPVVGNPSSGMKHRIINNTDVITSQGIRLSELETKFIESDVGSLTIEVGNLREELGPKPPSFSQNVYSRLNEIDTKQTTVESDISAIKTSIGYPGNNSIITSVNTNTDNIASINLELNQSGGIKQRLTVIETSIGSDDIPSSIKGQIKDNTTSIESLNGIVGENTSSGLRANVSWLNQIVGTDSSGGQPSPPGSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL 484
               SCOP domains d1          v1i                                                                         c1 C:   319-391 Adenov                                          irus                                                                                                                                                 -------------------------------------------------------------------------d1v1ic2 C:459-483         SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Fibritin_C-1v1iC01      - Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Fibritin_C-1v1iC02      - Pfam domains (2)
           Pfam domains (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Fibritin_C-1v1iC03      - Pfam domains (3)
         Sec.struct. author ..----------.hh-------------------------------------------------------------------------hh.ee---ee..eeee.....e------------------------------------------ee...-.........eee...-..-------------------eee....-------.eee...-------------------------------...-----------ee....------------------------------.ee.-------------------------------------------------------------------------..........eeee..eeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v1i C 319 VS----------IKK-------------------------------------------------------------------------SSGLN---FDNTAIAINAGKGL------------------------------------------EFDTN-TSESPDINPIKTKIG-SG-------------------IDYNENG-------AMITKLG-------------------------------AGL-----------SFDNSG------------------------------AITI-------------------------------------------------------------------------IPEAPRDGQAYVRKDGEWVLLSTFL 483
                             |       -  | |    -         -         -         -         -         -         -       325  |   |332       342         -         -         -         -  |   |349       359  | ||   -         -     | 369 |     372     |   -         -         -       381         - |    |  -         -         -       390|        -         -         -         -         -         -         -    |  464       474         
                           320        321 |                                                                       324 328 329          342                                        343 347 |           362 ||                 365   371     372   378                             379 |         382  387                            388  |                                                                       459                        
                                        323                                                                                                                                             348             363|                                                                       381                                                391                                                                                                  
                                                                                                                                                                                                         364
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Coiled coil proteins (689)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 3)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Fibritin_C] (7)

(-) Gene Ontology  (9, 10)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C   (WAC_BPT4 | P10104)
cellular component
    GO:0019012    virion    The complete fully infectious extracellular virus particle.

Chain A,B,C   (SPIKE_ADE02 | P03275)
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
    GO:0046718    viral entry into host cell    The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
    GO:0019058    viral life cycle    A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
    GO:0016032    viral process    A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
    GO:0019062    virion attachment to host cell    The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
cellular component
    GO:0042025    host cell nucleus    A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0019028    viral capsid    The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.

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    Ser A:351 - Pro A:352   [ RasMol ]  
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SPIKE_ADE02 | P03275: 1qhv 1qiu 1v1h 1x9t 2c9f 4ar2 4v4u
        WAC_BPT4 | P10104: 1aa0 1avy 1ox3 1rfo 1v1h 2bsg 2ibl 2kbl 3a1m 3j2o 4mmq 4mmr 4mms 4mmt 4mmu 4mmv 4ncu 4ncv 4ncw

(-) Related Entries Specified in the PDB File

1aa0 FIBRITIN DELETION MUTANT E (BACTERIOPHAGE T4)
1avy FIBRITIN DELETION MUTANT M (BACTERIOPHAGE T4)
1ox3 CRYSTAL STRUCTURE OF MINI-FIBRITIN
1qiu A TRIPLE BETA-SPIRAL IN THE ADENOVIRUS FIBRE SHAFT REVEALS A NEW STRUCTURAL MOTIF FOR BIOLOGICAL FIBRES
1rfo TRIMERIC FOLDON OF THE T4 PHAGEHEAD FIBRITIN
1v1h ADENOVIRUS FIBRE SHAFT SEQUENCE N-TERMINALLY FUSED TO THE BACTERIOPHAGE T4 FIBRITIN FOLDON TRIMERISATION MOTIF WITH A SHORT LINKER