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(-) Description

Title :  FIBRITIN DELETION MUTANT E (BACTERIOPHAGE T4)
 
Authors :  Y. Tao, S. V. Strelkov, V. V. Mesyanzhinov, M. G. Rossmann
Date :  18 Jan 97  (Deposition) - 23 Jul 97  (Release) - 16 Nov 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Bacteriophage T4, Fibritin, Structural Protein, Bacteriophage Assembly, Attachment Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Tao, S. V. Strelkov, V. V. Mesyanzhinov, M. G. Rossmann
Structure Of Bacteriophage T4 Fibritin: A Segmented Coiled Coil And The Role Of The C-Terminal Domain.
Structure V. 5 789 1997
PubMed-ID: 9261070  |  Reference-DOI: 10.1016/S0969-2126(97)00233-5
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FIBRITIN
    Cell Line: BL21
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Gene: WAC E
    Expression System Plasmid: BL21
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET19B
    Expression System Vector Type: PLASMID
    Fragment: DELETION MUTANT E, DEL(368-486)
    Gene: WAC
    Organism Scientific: ENTEROBACTERIA PHAGE T4
    Organism Taxid: 10665
    Synonym: GPWAC E

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2ZN1Ligand/IonZINC ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2ZN-1Ligand/IonZINC ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:425BINDING SITE FOR RESIDUE CL A 484
2AC2SOFTWAREASP A:449 , GLU A:475BINDING SITE FOR RESIDUE ZN A 565

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1AA0)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:113
 aligned with WAC_BPT4 | P10104 from UniProtKB/Swiss-Prot  Length:487

    Alignment length:113
                                   381       391       401       411       421       431       441       451       461       471       481   
             WAC_BPT4   372 VSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL 484
               SCOP domains d1aa0a_ A: Fibritin                                                                                               SCOP domains
               CATH domains 1aa0A00 A:371-483 6-Phosphogluconate Dehydrogenase, domain 3                                                      CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh......hhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee..eeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                 1aa0 A 371 VSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVLLSTFL 483
                                   380       390       400       410       420       430       440       450       460       470       480
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Coiled coil proteins (689)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1AA0)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A   (WAC_BPT4 | P10104)
cellular component
    GO:0019012    virion    The complete fully infectious extracellular virus particle.

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  1aa0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        WAC_BPT4 | P10104: 1avy 1ox3 1rfo 1v1h 1v1i 2bsg 2ibl 2kbl 3a1m 3j2o 4mmq 4mmr 4mms 4mmt 4mmu 4mmv 4ncu 4ncv 4ncw

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