Chain A from PDB Type:RNA Length:1514
5lmq A 5 UGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUACCUCCUUU 1542
14 24 34 44 54 64 76 |89 || 101 111 121 130 140 150 160 170 180 189A||||||189K| 198 ||219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439| 450 461| 480 490 ||501 511 521 531 541 551 561 571 581 591 601 611 621 631 641 651 661 671 681 691 701 711 721 731 741 751 761 771 781 791 801 811 821 831 841| 857 867 877 887 897 907 917 927 937 947 957 967 977 987 997 | 1006 1016 1026 ||1032 1042 1052 1062 1072 1082 1092 1102 1112 1122 1132 1142 1152 1162 || 1173 1183 1193 1203 1213 1223 1233 1243 1253 1263 1273 1283 1293 1303 1313 1323 1333 1343 1353 1363| 1372 1382 1392 1402 1412 1422 1432 1442|| 1457 1467 1477 1487 1497 1507 1517 1527 ||1538
73| 84| 93| 129A 189A|||||189J|| 204| 439| 458||| 477| 496| 841| 1001A 1030A||| 1166| 1363A 1442A| 1447|| 1532|
76 88 96 189B|||||189K| 216 441 460|| 479 498 848 1030B|| 1168 1442B 1452| 1534
189C|||||189L 461| 1030C| 1456
189D||||| 470 1030D
189E||||
189F|||
189G||
189H|
189I
Chain B from PDB Type:PROTEIN Length:234
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .........................eeeee..eeee..hhhhhhhhhhhhhhhhhhhh...eeee.......hhhhhhhhhh...ee..........hhhhhhhhhhhhhhhh....hhhhh....hhhhhhhhhhhhhh.hhhhh........eeee.....hhhhhhhhhhh...eee............ee......hhhhhhhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
5lmq B 7 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQ 240
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236
Chain C from PDB Type:PROTEIN Length:206
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhh.......ee......hhhhhhhhhhhhhhhhhhhh....eeeeeeee....eeeeeee.hhhhhhh...hhhhhhhhhhhhhh....eeeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeeeee.hhhhh....ee..eee.....hhhh.eeeeeeee......eeeeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
5lmq C 2 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEV 207
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201
Chain D from PDB Type:PROTEIN Length:208
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhh...................................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..eee...............eeeee.hhhh.hhhhhhhhhhhh.................ee.............hhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
5lmq D 2 GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR 209
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201
Chain E from PDB Type:PROTEIN Length:150
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeeeeeeeeeee....eeeeeeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhhheee...........eeeee..eeeeeee......ee.hhhhhhhhhhhh...eeeeee...hhhhhhhhhhhhhhhh.hhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
5lmq E 5 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKG 154
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154
Chain F from PDB Type:PROTEIN Length:101
SCOP domains ----------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeee.....hhhhhhhhhhhhhhhhhhh.eeeeeeeeeeee.........eeeeeeeeeeehhhhhhhhhhhhhhh..eeeeeeee.....ee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------- Transcript
5lmq F 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQEPFLANA 101
10 20 30 40 50 60 70 80 90 100
Chain G from PDB Type:PROTEIN Length:155
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..................hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..eeeeeee....eeeeeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhh....hhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
5lmq G 2 ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW 156
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
Chain H from PDB Type:PROTEIN Length:138
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhh...eee..ee..eeeeeee...................eeee........eehhhhh.hhhhhh.eeeeee..eeehhhhhhhhh..eeeeeeee Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
5lmq H 1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW 138
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain I from PDB Type:PROTEIN Length:127
SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeee..eeeeeeeee....eee..eehhhhh...hhhhhhhhhhhhhh....eeeeeeee..hhhhhhhhhhhhhhhhhhhhh....................................... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
5lmq I 2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR 128
11 21 31 41 51 61 71 81 91 101 111 121
Chain J from PDB Type:PROTEIN Length:98
SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.hhhhhhhhhhhhhhhhh..............ee....ee.........ee.eeeeeeeeeeee.....hhhhh..........eeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
5lmq J 3 KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT 100
12 22 32 42 52 62 72 82 92
Chain K from PDB Type:PROTEIN Length:122
SCOP domains -------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eeeeeeeee..eeeeeee.....eeeee........hhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....hhhhhhhhhhhhh.eeeeeee...........hhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
5lmq K 8 KKVKRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRKAS 129
17 27 37 47 57 67 77 87 97 107 117 127
Chain L from PDB Type:PROTEIN Length:124
SCOP domains ---------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhh..................eeeeeeeeeee.........eeeeeeee....eeeee............eeeeee...........ee...............hhhhh........ Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
5lmq L 5 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA 128
14 24 34 44 54 64 74 84 94 104 114 124
Chain M from PDB Type:PROTEIN Length:125
SCOP domains ----------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhh....hhhhhhhhhhhh..........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhhh...........hhhhhh.............. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
5lmq M 2 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK 126
11 21 31 41 51 61 71 81 91 101 111 121
Chain N from PDB Type:PROTEIN Length:60
SCOP domains ------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------ Pfam domains
Sec.struct. author ......................................hhhhhhhhhhhh....eee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------ Transcript
5lmq N 2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 61
11 21 31 41 51 61
Chain O from PDB Type:PROTEIN Length:88
SCOP domains ---------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------- Transcript
5lmq O 2 PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG 89
11 21 31 41 51 61 71 81
Chain P from PDB Type:PROTEIN Length:83
SCOP domains ----------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee........eeeeeee..........eeeeee.........eeehhhhhhhhhhhh...hhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------- Transcript
5lmq P 1 MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQE 83
10 20 30 40 50 60 70 80
Chain Q from PDB Type:PROTEIN Length:99
SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeee.....eeeeeeeeeee......eeeeeeeeeee..........eeeeeeeeeee..eeeeeeeeee..hhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
5lmq Q 2 PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSK 100
11 21 31 41 51 61 71 81 91
Chain R from PDB Type:PROTEIN Length:73
SCOP domains ------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhh..ee.....................hhhhhh.hhhhhhhhhhhhhhhhhhh........... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
5lmq R 16 PSRKAKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVRK 88
25 35 45 55 65 75 85
Chain S from PDB Type:PROTEIN Length:82
SCOP domains ---------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............hhhhhhh..........................eeeee....eeeee...................... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------- Transcript
5lmq S 2 PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRGH 83
11 21 31 41 51 61 71 81
Chain T from PDB Type:PROTEIN Length:99
SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
5lmq T 8 RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA 106
17 27 37 47 57 67 77 87 97
Chain V from PDB Type:PROTEIN Length:24
SCOP domains ------------------------ SCOP domains
CATH domains ------------------------ CATH domains
Pfam domains ------------------------ Pfam domains
Sec.struct. author ......hhhhhhhhh......... Sec.struct. author
SAPs(SNPs) ------------------------ SAPs(SNPs)
PROSITE ------------------------ PROSITE
Transcript ------------------------ Transcript
5lmq V 2 GKGDRRTRRGKIWRGTYGKYRPRK 25
11 21
Chain W from PDB Type:PROTEIN Length:71
SCOP domains ----------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeee...hhh.eeeeee....eeeee.hhhhhhh........eeeeee......eeee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------- Transcript
5lmq W 1 AKEKDTIRTEGVVTEALPNATFRVKLDSGPEILAYISGKMRMHYIRILPGDRVVVEITPYDPTRGRIVYRK 71
10 20 30 40 50 60 70
Chain X from PDB Type:PROTEIN Length:168
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...ee.......eeee........eeeehhhhhhhhhhhh.eeeeee......eeeeehhhhhhhhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhhhhhhhhhhhh.eeeeeee......hhhhhhhhhhhhhhhhh...eeeeeeeee...eeeeeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
5lmq X 3 KEYLTNERIRAKQVRVVGPDGKQLGIMDTREALRLAQEMDLDLVLVGPNADPPVARIMDYSKWRYEQQMAEKEARKKAKRTEVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNMLLAPVKV 170
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162
Chain Y from PDB Type:RNA Length:21
5lmq Y 20 AGGCAAGGAGGUAAAAAUGUU 40
29 39
Chain Z from PDB Type:RNA Length:77
5lmq Z 1 CGCGGGGxGGAGCAGCCUGGUAGCUCGUCGGGcUCAUAACCCGAAGxUCGUCGGxuCAAAUCCGGCCCCCGCAACCA 76
|10 |19 29 | 39 | 49 || 59 69
8-4SU 17A 32-OMC 46-G7M 54-5MU
55-PSU
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |