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(-) Description

Title :  THE NECK-LINKER AND ALPHA 7 HELIX OF DROSOPHILA MELANOGASTER KINESIN-1 FUSED TO EB1
 
Authors :  R. K. Phillips, I. Rayment
Date :  11 May 16  (Deposition) - 03 Aug 16  (Release) - 05 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Kinesin, Coiled-Coil, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. K. Phillips, L. G. Peter, S. P. Gilbert, I. Rayment
Family-Specific Kinesin Structures Reveal Neck-Linker Lengt Based On Initiation Of The Coiled-Coil.
J. Biol. Chem. V. 291 20372 2016
PubMed-ID: 27462072  |  Reference-DOI: 10.1074/JBC.M116.737577

(-) Compounds

Molecule 1 - CHIMERA PROTEIN OF KINESIN HEAVY CHAIN AND MICROTUBULE- ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System Taxid469008
    FragmentUNP P17210 RESIDUES 334-365,UNP Q15691 RESIDUES 207-257
    GeneKHC, KIN, CG7765, MAPRE1
    Organism CommonFRUIT FLY, HUMAN
    Organism ScientificDROSOPHILA MELANOGASTER, HOMO SAPIENS
    Organism Taxid7227, 9606
    SynonymAPC-BINDING PROTEIN EB1,END-BINDING PROTEIN 1,EB1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1EDO1Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:75 , TYR A:76 , ALA A:77 , HOH A:226 , HOH A:230 , HOH A:244 , HOH A:249 , LYS B:49binding site for residue EDO A 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JVU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JVU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JVU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JVU)

(-) Exons   (0, 0)

(no "Exon" information available for 5JVU)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:76
                                                                                                           
               SCOP domains ---------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                  5jvu A 11 EELTAEEWKRRYEKEKEKNARLKGKVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVIPD 86
                                    20        30        40        50        60        70        80      

Chain B from PDB  Type:PROTEIN  Length:69
                                                                                                    
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  5jvu B 10 NEELTAEEWKRRYEKEKEKNARLKGKVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYAT 78
                                    19        29        39        49        59        69         

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JVU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JVU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JVU)

(-) Gene Ontology  (70, 76)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KINH_DROME | P172102y5w 2y65 5jvr 5jvs
        MARE1_HUMAN | Q156911pa7 1txq 1ueg 1vka 1wu9 1yib 1yig 2hkq 2hl3 2hl5 2qjz 2r8u 3gjo 3mtu 3mud 3tq7 4xa1 4xa3 4xa6 5jv3 5jvm 5jvp 5jvr 5jvs 5jx1

(-) Related Entries Specified in the PDB File

5jv3 5jvm 5jvp 5jvr 5jvs