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(-) Description

Title :  CRYSTAL STRUCTURE OF DROSOPHILA MELANOGASTER KINESIN-1 MOTOR DOMAIN DIMER-TAIL COMPLEX
 
Authors :  H. Y. K. Kaan, D. D. Hackney, F. Kozielski
Date :  19 Jan 11  (Deposition) - 24 Aug 11  (Release) - 30 Sep 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D,W,X,Y
Biol. Unit 1:  A,Y  (2x)
Biol. Unit 2:  B,X  (2x)
Biol. Unit 3:  C,D,W  (1x)
Keywords :  Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  H. Y. K. Kaan, D. D. Hackney, F. Kozielski
The Structure Of The Kinesin-1 Motor-Tail Complex Reveals The Mechanism Of Autoinhibition.
Science V. 333 883 2011
PubMed-ID: 21836017  |  Reference-DOI: 10.1126/SCIENCE.1204824

(-) Compounds

Molecule 1 - KINESIN HEAVY CHAIN
    ChainsA, B, C, D
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21
    Expression System Taxid511693
    Expression System VariantCODONPLUS
    FragmentMOTOR DOMAIN, RESIDUES 1-365
    Organism CommonFRUIT FLY
    Organism ScientificDROSOPHILA MELANOGASTER
    Organism Taxid7227
    SynonymKINESIN
 
Molecule 2 - KINESIN HEAVY CHAIN
    ChainsW, X, Y
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentTAIL DOMAIN RESIDUES 937-952
    Organism CommonFRUIT FLY
    Organism ScientificDROSOPHILA MELANOGASTER
    Organism Taxid7227
    SynonymKINESIN

 Structural Features

(-) Chains, Units

  1234567
Asymmetric Unit ABCDWXY
Biological Unit 1 (2x)A     Y
Biological Unit 2 (2x) B   X 
Biological Unit 3 (1x)  CDW  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1ADP4Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG4Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:18 , ARG A:20 , PRO A:21 , SER A:95 , SER A:96 , GLY A:97 , LYS A:98 , THR A:99 , HIS A:100 , MG A:800 , HOH A:2185 , HOH A:2186 , HOH A:2187 , HOH A:2188 , HOH A:2189 , HOH A:2190 , HOH A:2191 , HOH A:2192 , HOH A:2193 , HOH A:2194 , HOH A:2195 , HOH A:2196 , THR B:202BINDING SITE FOR RESIDUE ADP A 603
2AC2SOFTWARETHR A:99 , ADP A:603 , HOH A:2150 , HOH A:2156 , HOH A:2190 , HOH A:2196BINDING SITE FOR RESIDUE MG A 800
3AC3SOFTWARETHR A:202 , ASN A:205 , ARG B:18 , PRO B:21 , THR B:94 , SER B:95 , SER B:96 , GLY B:97 , LYS B:98 , THR B:99 , HIS B:100 , MG B:800 , HOH B:2137 , HOH B:2164 , HOH B:2165 , HOH B:2166 , HOH B:2168 , HOH B:2169 , HOH B:2170 , HOH B:2171 , HOH B:2172 , HOH B:2173 , HOH B:2174BINDING SITE FOR RESIDUE ADP B 603
4AC4SOFTWARETHR B:99 , ADP B:603 , HOH B:2052 , HOH B:2137 , HOH B:2170 , HOH B:2171BINDING SITE FOR RESIDUE MG B 800
5AC5SOFTWAREARG C:18 , PRO C:21 , GLN C:93 , THR C:94 , SER C:95 , SER C:96 , GLY C:97 , LYS C:98 , THR C:99 , HIS C:100 , MG C:800 , HOH C:2043 , HOH C:2139 , HOH C:2174 , HOH C:2175 , HOH C:2176 , HOH C:2177 , HOH C:2178 , HOH C:2179 , HOH C:2180BINDING SITE FOR RESIDUE ADP C 603
6AC6SOFTWARETHR C:99 , ADP C:603 , HOH C:2068 , HOH C:2139 , HOH C:2177 , HOH C:2178BINDING SITE FOR RESIDUE MG C 800
7AC7SOFTWAREARG D:18 , ARG D:20 , PRO D:21 , GLN D:93 , THR D:94 , SER D:95 , SER D:96 , GLY D:97 , LYS D:98 , THR D:99 , HIS D:100 , MG D:800 , HOH D:2074 , HOH D:2091 , HOH D:2092 , HOH D:2093 , HOH D:2094 , HOH D:2095 , HOH D:2096BINDING SITE FOR RESIDUE ADP D 603
8AC8SOFTWARETHR D:99 , ADP D:603 , HOH D:2069 , HOH D:2074 , HOH D:2092 , HOH D:2093BINDING SITE FOR RESIDUE MG D 800

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Y65)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Asn A:167 -Arg A:168
2Ala C:49 -Gly C:50
3Ala W:943 -Lys W:944
4Gly W:949 -Gln W:950

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Y65)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1KINESIN_MOTOR_2PS50067 Kinesin motor domain profile.KINH_DROME12-333
 
 
 
  4A:12-333
B:12-333
C:12-333
D:12-333
2KINESIN_MOTOR_1PS00411 Kinesin motor domain signature.KINH_DROME232-243
 
 
 
  4A:232-243
B:232-243
C:232-243
D:232-243
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1KINESIN_MOTOR_2PS50067 Kinesin motor domain profile.KINH_DROME12-333
 
 
 
  2A:12-333
-
-
-
2KINESIN_MOTOR_1PS00411 Kinesin motor domain signature.KINH_DROME232-243
 
 
 
  2A:232-243
-
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1KINESIN_MOTOR_2PS50067 Kinesin motor domain profile.KINH_DROME12-333
 
 
 
  2-
B:12-333
-
-
2KINESIN_MOTOR_1PS00411 Kinesin motor domain signature.KINH_DROME232-243
 
 
 
  2-
B:232-243
-
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1KINESIN_MOTOR_2PS50067 Kinesin motor domain profile.KINH_DROME12-333
 
 
 
  2-
-
C:12-333
D:12-333
2KINESIN_MOTOR_1PS00411 Kinesin motor domain signature.KINH_DROME232-243
 
 
 
  2-
-
C:232-243
D:232-243

(-) Exons   (0, 0)

(no "Exon" information available for 2Y65)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:328
 aligned with KINH_DROME | P17210 from UniProtKB/Swiss-Prot  Length:975

    Alignment length:344
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347    
           KINH_DROME     8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRR 351
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.eeeeee...hhhhhhh.....ee........eeee..eeee..eee....hhhhhhhhhhhhhhhhhhh...eeeeee.....hhhhhhh.........hhhhhhhhhhhhhhhhh...eeeeeeeeeeeee................eee.....eee.........hhhhhhhhhhhhhhhhh....hhhhhhhh.eeeeeeeeeeee.....eeeeeeeeee......----------------.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh....eeeeeeee.....hhhhhhhhhhhhhhhh..eee........hhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----KINESIN_MOTOR_2  PDB: A:12-333 UniProt: 12-333                                                                                                                                                                                                                                                                                    ------------------ PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KINESIN_MOTO------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y65 A   8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEK----------------INKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRR 351
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237      |  -         -   |   267       277       287       297       307       317       327       337       347    
                                                                                                                                                                                                                                                                      244              261                                                                                          

Chain B from PDB  Type:PROTEIN  Length:341
 aligned with KINH_DROME | P17210 from UniProtKB/Swiss-Prot  Length:975

    Alignment length:355
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358     
           KINH_DROME     9 AEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLK 363
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeeeee...hhhhhhh.....ee........eeee..eeee..eee....hhhhhhhhhhhhhhhhhhh...eeeeee.....hhhhhhh.........hhhhhhhhhhhhhhhh....eeeeeeeeeeeee...............eeee.....eeee........hhhhhhhhhhhhhhhhh....hhhhhhh..eeeeeeeeeeee....eeeeeeeeeee.......--------------..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhh........eeeeeeee.....hhhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---KINESIN_MOTOR_2  PDB: B:12-333 UniProt: 12-333                                                                                                                                                                                                                                                                                    ------------------------------ PROSITE (1)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KINESIN_MOTO------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y65 B   9 AEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKV--------------NINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLK 363
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238      |  -         - |     268       278       288       298       308       318       328       338       348       358     
                                                                                                                                                                                                                                                                      245            260                                                                                                       

Chain C from PDB  Type:PROTEIN  Length:343
 aligned with KINH_DROME | P17210 from UniProtKB/Swiss-Prot  Length:975

    Alignment length:357
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       
           KINH_DROME     7 IPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLK 363
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee.eeeeee...hhhhhhh.....ee........eeee..eeee..eee....hhhhhhhhhhhhhhhhhhh...eeeeee.....hhhhhhh.........hhhhhhhhhhhhhhhh....eeeeeeeeeeeee................eee.....eee.........hhhhhhhhhhhhhhhhh....hhhhhhhh.eeeeeeeeeeee.....eeeeeeeeee......--------------...hhhhhhhhhhhhhhhhh.....hhhhhhhhhhh........eeeeeeee.....hhhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----KINESIN_MOTOR_2  PDB: C:12-333 UniProt: 12-333                                                                                                                                                                                                                                                                                    ------------------------------ PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KINESIN_MOTO------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y65 C   7 IPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEK--------------KNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLK 363
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       | -         -  |    266       276       286       296       306       316       326       336       346       356       
                                                                                                                                                                                                                                                                       244            259                                                                                                        

Chain D from PDB  Type:PROTEIN  Length:338
 aligned with KINH_DROME | P17210 from UniProtKB/Swiss-Prot  Length:975

    Alignment length:353
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359   
           KINH_DROME    10 EDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARL 362
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.eeeeee...hhhhhhhh..............eeee..eeee..eee....hhhhhhhhhhhhhhhhhh....eeeeee.....hhhhhhh.........hhhhhhhhhhhhhhhhh...eeeeeeeeeeeee..eeee......eee.ee.......ee.....ee..hhhhhhhhhhhhhhhh.....hhhhhhhhh.................eeeeeeeeee.......---------------.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhh........eeeeeeee.....hhhhhhhhhhhhhhhh..ee....eee.hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --KINESIN_MOTOR_2  PDB: D:12-333 UniProt: 12-333                                                                                                                                                                                                                                                                                    ----------------------------- PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KINESIN_MOTO----------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y65 D  10 EDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKV---------------INKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARL 362
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239     |   -         - |     269       279       289       299       309       319       329       339       349       359   
                                                                                                                                                                                                                                                                     245             261                                                                                                     

Chain W from PDB  Type:PROTEIN  Length:13
 aligned with KINH_DROME | P17210 from UniProtKB/Swiss-Prot  Length:975

    Alignment length:13
                                   947   
           KINH_DROME   938 PQAQIAKPIRSGQ 950
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author .eeee...eee.. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                PROSITE (1) ------------- PROSITE (1)
                PROSITE (2) ------------- PROSITE (2)
                 Transcript ------------- Transcript
                 2y65 W 938 PQAQIAKPIRSGQ 950
                                   947   

Chain X from PDB  Type:PROTEIN  Length:13
 aligned with KINH_DROME | P17210 from UniProtKB/Swiss-Prot  Length:975

    Alignment length:13
                                   947   
           KINH_DROME   938 PQAQIAKPIRSGQ 950
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ............. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                PROSITE (1) ------------- PROSITE (1)
                PROSITE (2) ------------- PROSITE (2)
                 Transcript ------------- Transcript
                 2y65 X 938 PQAQIAKPIRSGQ 950
                                   947   

Chain Y from PDB  Type:PROTEIN  Length:12
 aligned with KINH_DROME | P17210 from UniProtKB/Swiss-Prot  Length:975

    Alignment length:12
                                   947  
           KINH_DROME   938 PQAQIAKPIRSG 949
               SCOP domains ------------ SCOP domains
               CATH domains ------------ CATH domains
               Pfam domains ------------ Pfam domains
         Sec.struct. author ............ Sec.struct. author
                 SAPs(SNPs) ------------ SAPs(SNPs)
                PROSITE (1) ------------ PROSITE (1)
                PROSITE (2) ------------ PROSITE (2)
                 Transcript ------------ Transcript
                 2y65 Y 938 PQAQIAKPIRSG 949
                                   947  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2Y65)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2Y65)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2Y65)

(-) Gene Ontology  (48, 48)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,W,X,Y   (KINH_DROME | P17210)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0008574    ATP-dependent microtubule motor activity, plus-end-directed    Catalysis of movement along a microtubule toward the plus end, coupled to the hydrolysis of ATP.
    GO:0008017    microtubule binding    Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
    GO:0003777    microtubule motor activity    Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
    GO:0003774    motor activity    Catalysis of the generation of force resulting either in movement along a microfilament or microtubule, or in torque resulting in membrane scission, coupled to the hydrolysis of a nucleoside triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0061572    actin filament bundle organization    A process that results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle.
    GO:0008088    axo-dendritic transport    The directed movement of organelles or molecules along microtubules in neuron projections.
    GO:0007411    axon guidance    The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.
    GO:0007409    axonogenesis    De novo generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells. Refers to the morphogenesis or creation of shape or form of the developing axon.
    GO:0051299    centrosome separation    The process in which duplicated centrosome components move away from each other. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle.
    GO:0007303    cytoplasmic transport, nurse cell to oocyte    The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.
    GO:0016482    cytosolic transport    The directed movement of substances or organelles within the cytosol.
    GO:0048813    dendrite morphogenesis    The process in which the anatomical structures of a dendrite are generated and organized. A dendrite is a freely branching protoplasmic process of a nerve cell.
    GO:0046843    dorsal appendage formation    Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.
    GO:0040023    establishment of nucleus localization    The directed movement of the nucleus to a specific location within a cell.
    GO:0001754    eye photoreceptor cell differentiation    The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms.
    GO:0048312    intracellular distribution of mitochondria    Any process that establishes the spatial arrangement of mitochondria within the cell.
    GO:0006886    intracellular protein transport    The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
    GO:0008345    larval locomotory behavior    Locomotory behavior in a larval (immature) organism.
    GO:0030011    maintenance of cell polarity    The maintenance of established anisotropic intracellular organization or cell growth patterns.
    GO:0046785    microtubule polymerization    The addition of tubulin heterodimers to one or both ends of a microtubule.
    GO:0051012    microtubule sliding    The movement of one microtubule along another microtubule.
    GO:0007018    microtubule-based movement    A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
    GO:0048311    mitochondrion distribution    Any process that establishes the spatial arrangement of mitochondria between and within cells.
    GO:0047497    mitochondrion transport along microtubule    The directed movement of a mitochondrion along a microtubule, mediated by motor proteins.
    GO:0048812    neuron projection morphogenesis    The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites.
    GO:0019227    neuronal action potential propagation    The propagation of an action potential along an axon, away from the soma.
    GO:0007269    neurotransmitter secretion    The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium regualated exocytosis during synaptic transmission.
    GO:0007310    oocyte dorsal/ventral axis specification    The establishment, maintenance and elaboration of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.
    GO:0008103    oocyte microtubule cytoskeleton polarization    Establishment and maintenance of a specific axis of polarity of the oocyte microtubule network. The axis is set so that the minus and plus ends of the microtubules of the mid stage oocyte are positioned along the anterior cortex and at the posterior pole, respectively. An example of this is found in Drosophila melanogaster.
    GO:0007315    pole plasm assembly    Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.
    GO:0045451    pole plasm oskar mRNA localization    Any process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
    GO:0007317    regulation of pole plasm oskar mRNA localization    Any process that modulates the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
    GO:0048741    skeletal muscle fiber development    The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
    GO:0035617    stress granule disassembly    The disaggregation of a stress granule into its constituent protein and RNA parts.
    GO:0010970    transport along microtubule    The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity.
cellular component
    GO:0030478    actin cap    Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. An example of this is the actin cap found in Saccharomyces cerevisiae.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005871    kinesin complex    Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.
    GO:0005874    microtubule    Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
    GO:0005875    microtubule associated complex    Any multimeric complex connected to a microtubule.
    GO:0035371    microtubule plus-end    The growing (plus) end of a microtubule. In vitro, microtubules polymerize more quickly at the plus end than at the minus end. In vivo, microtubule growth occurs only at the plus end, and the plus end switches between periods of growth and shortening, a behavior known as dynamic instability.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0098793    presynapse    The part of a synapse that is part of the presynaptic cell.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        KINH_DROME | P172102y5w 5jvr 5jvs 5jvu

(-) Related Entries Specified in the PDB File

2y5w KINESIN MOTOR DOMAIN A