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(-) Description

Title :  THE NECK-LINKER AND ALPHA 7 HELIX OF HOMO SAPIENS EG5 FUSED TO EB1
 
Authors :  R. K. Phillips, I. Rayment
Date :  10 May 16  (Deposition) - 03 Aug 16  (Release) - 05 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.01
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Kinesin, Coiled-Coil, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. K. Phillips, L. G. Peter, S. P. Gilbert, I. Rayment
Family-Specific Kinesin Structures Reveal Neck-Linker Lengt Based On Initiation Of The Coiled-Coil.
J. Biol. Chem. V. 291 20372 2016
PubMed-ID: 27462072  |  Reference-DOI: 10.1074/JBC.M116.737577

(-) Compounds

Molecule 1 - CHIMERA PROTEIN OF KINESIN-LIKE PROTEIN KIF11 AND MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Fragment: UNP P52732 RESIDUES 366-391,UNP Q15691 RESIDUES 210-257
    Gene: KIF11, EG5, KNSL1, TRIP5, MAPRE1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: KINESIN-LIKE PROTEIN 1,KINESIN-LIKE SPINDLE PROTEIN HKSP, KINESIN-RELATED MOTOR PROTEIN EG5,THYROID RECEPTOR-INTERACTING PROTEIN 5,TRIP-5,APC-BINDING PROTEIN EB1,END-BINDING PROTEIN 1,EB1

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP B:76 , GLU D:14 , HOH D:230binding site for residue CA D 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JV3)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JV3)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JV3)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5JV3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:62
                                                                                             
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                  5jv3 A  8 KKALIKEYTEEIERLKRDLAALEKERDFYFGKLRNIELICQENEDPVLQRIVDILYATDEGF 72
                                    17        27        37        47   ||   60        70  
                                                                      51|                 
                                                                       55                 


Chain B from PDB  Type:PROTEIN  Length:69
                                                                                                    
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  5jv3 B  8 KKALIKEYTEEIERLKRDLAALEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVIPD 76
                                    17        27        37        47        57        67         


Chain C from PDB  Type:PROTEIN  Length:64
                                                                                               
               SCOP domains ---------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------- Transcript
                  5jv3 C  3 NQKLTKKALIKEYTEEIERLKRDLAALEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILY 66
                                    12        22        32        42        52        62    


Chain D from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  5jv3 D  1 LSNQKLTKKALIKEYTEEIERLKRDLAALEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYAT 68
                                    10        20        30        40        50        60
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JV3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JV3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JV3)

(-) Gene Ontology  (48, 56)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KIF11_HUMAN | P52732: 1ii6 1q0b 1x88 1yrs 2fky 2fl2 2fl6 2fme 2g1q 2gm1 2ieh 2pg2 2q2y 2q2z 2uyi 2uym 2wog 2x2r 2x7c 2x7d 2x7e 2xae 3cjo 3hqd 3k3b 3k5e 3ken 3l9h 3wpn 3zcw 4a1z 4a28 4a50 4a51 4a5y 4ap0 4aqv 4aqw 4as7 4b7b 4bbg 4bxn 4ck5 4ck6 4ck7 4zca 4zhi
        MARE1_HUMAN | Q15691: 1pa7 1txq 1ueg 1vka 1wu9 1yib 1yig 2hkq 2hl3 2hl5 2qjz 2r8u 3gjo 3mtu 3mud 3tq7 4xa1 4xa3 4xa6 5jvm 5jvp 5jvr 5jvs 5jvu 5jx1

(-) Related Entries Specified in the PDB File

5jvm 5jvp 5jvr 5jvs 5jvu 5jx1