5JVR - JenaLib

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Title :   THE NECK-LINKER OF MUS MUSCULUS KIF3A FUSED TO THE ALPHA 7 HELIX OF DROSOPHILA MELANOGASTER KINESIN-1 FUSED TO EB1

Authors :   R. K. Phillips, I. Rayment

Date :   11 May 16 (Deposition) - 03 Aug 16 (Release) - 05 Oct 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)
Biol. Unit 4: G,H  (1x)

Keywords :   Kinesin, Coiled-Coil, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. K. Phillips, L. G. Peter, S. P. Gilbert, I. Rayment
Family-Specific Kinesin Structures Reveal Neck-Linker Lengt Based On Initiation Of The Coiled-Coil.
J. Biol. Chem. V. 291 20372 2016
PubMed-ID: 27462072 | Reference-DOI: 10.1074/JBC.M116.737577

Molecule 1 - CHIMERA PROTEIN OF MOUSE KIF3A,FRUIT FLY KINESIN-1 AND HUMAN EB1
	Chains	:	A, B, C, D, E, F, G, H
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Taxid	:	469008
	Fragment	:	UNP P28741 RESIDUES 352-359,UNP P17210 RESIDUES 345-358,UNP Q15691 RESIDUES 207-257
	Gene	:	KIF3A, KIF3, KHC, KIN, CG7765, MAPRE1
	Organism Common	:	MOUSE, FRUIT FLY, HUMAN
	Organism Scientific	:	MUS MUSCULUS, DROSOPHILA MELANOGASTER, HOMO SAPIENS
	Organism Taxid	:	10090, 7227, 9606
	Synonym	:	MICROTUBULE PLUS END-DIRECTED KINESIN MOTOR 3A,APC-BINDING PROTEIN EB1,END-BINDING PROTEIN 1,EB1

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F
Biological Unit 4 (1x)	:							G	H

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 5JVR)

(no "Site" information available for 5JVR)

(no "SS Bond" information available for 5JVR)

(no "Cis Peptide Bond" information available for 5JVR)

(no "SAP(SNP)/Variant" information available for 5JVR)

(no "PROSITE Motif" information available for 5JVR)

(no "Exon" information available for 5JVR)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:61
                                                                                            
               SCOP domains ------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------- Transcript
                  5jvr A  9 ALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQNDPVLQRIVDILYATDEGFVIP 74
                                    18        28        38        53        63        73 
                                                                 47|                     
                                                                  53

Chain B from PDB  Type:PROTEIN  Length:64
                                                                                               
               SCOP domains ---------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------- Transcript
                  5jvr B  7 KDALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQENGENDPVLQRIVDILYATDEGF 71
                                    16        26        36        46  ||    57        67    
                                                                     49|                    
                                                                      51

Chain C from PDB  Type:PROTEIN  Length:67
                                                                                                  
               SCOP domains ------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  5jvr C  8 DALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVIP 74
                                    17        27        37        47        57        67

Chain D from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  5jvr D  7 KDALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQENEGNDPVLQRIVDILYATDEGFVIPD 75
                                    16        26        36        46    ||  57        67        
                                                                       51|                      
                                                                        53

Chain E from PDB  Type:PROTEIN  Length:62
                                                                                             
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                  5jvr E  7 KDALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATD 68
                                    16        26        36        46        56        66

Chain F from PDB  Type:PROTEIN  Length:75
                                                                                                          
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                  5jvr F  1 LSNEDPKDALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVIPD 75
                                    10        20        30        40        50        60        70

Chain G from PDB  Type:PROTEIN  Length:59
                                                                                          
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                  5jvr G  9 ALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQENDPVLQRIVDILYATDEGF 71
                                    18        28        38        48||      62         
                                                                   49|                 
                                                                    54

Chain H from PDB  Type:PROTEIN  Length:59
                                                                                          
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                  5jvr H  7 KDALAEEWKRRYEKEKEKVEDLEKERDFYFGKLRNIELICQENEPVLQRIVDILYATDE 69
                                    16        26        36        46   ||   60         
                                                                      50|              
                                                                       55

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 5JVR)

(no "CATH Domain" information available for 5JVR)

(no "Pfam Domain" information available for 5JVR)

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	5jvr
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Access by UniProt ID/Accession number
	KIF3A_MOUSE \| P28741
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		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	KINH_DROME \| P17210
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		Genomic Information	:	Ensembl
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		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	MARE1_HUMAN \| Q15691
		Comparative Protein Structure Models	:	ModBase
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	KIF3A_MOUSE \| P28741
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	KINH_DROME \| P17210
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	MARE1_HUMAN \| Q15691
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	KIF3A_MOUSE \| P28741	:	5jx1
	KINH_DROME \| P17210	:	2y5w 2y65 5jvs 5jvu
	MARE1_HUMAN \| Q15691	:	1pa7 1txq 1ueg 1vka 1wu9 1yib 1yig 2hkq 2hl3 2hl5 2qjz 2r8u 3gjo 3mtu 3mud 3tq7 4xa1 4xa3 4xa6 5jv3 5jvm 5jvp 5jvs 5jvu 5jx1

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Ligands, Modified Residues, Ions (0, 0)

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Gene Ontology (101, 121)

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