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(-) Description

Title :  CRYSTAL STRUCTURE OF CORE/LATCH DIMER OF BAX IN COMPLEX WITH BIMBH3MINI
 
Authors :  A. Y. Robin, K. Krishna Kumar, D. Westphal, A. Z. Wardak, G. V. Thompson G. Dewson, P. M. Colman, P. E. Czabotar
Date :  28 Apr 15  (Deposition) - 22 Jul 15  (Release) - 22 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Bax, Apoptosis, Bh3 Domain, Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Y. Robin, K. Krishna Kumar, D. Westphal, A. Z. Wardak, G. V. Thompson, G. Dewson, P. M. Colman, P. E. Czabotar
Crystal Structure Of Bax Bound To The Bh3 Peptide Of Bim Identifies Important Contacts For Interaction.
Cell Death Dis V. 6 E1809 2015
PubMed-ID: 26158515  |  Reference-DOI: 10.1038/CDDIS.2015.141

(-) Compounds

Molecule 1 - APOPTOSIS REGULATOR BAX
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BAX, BCL2L4
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: BCL-2-LIKE PROTEIN 4,BCL2-L-4
 
Molecule 2 - BCL-2-LIKE PROTEIN 11
    Chains: B
    Engineered: YES
    Fragment: BH3 MOTIF, UNP RESIDUES 141-160
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: BCL2-L-11,BCL2-INTERACTING MEDIATOR OF CELL DEATH
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4ZIH)

(-) Sites  (0, 0)

(no "Site" information available for 4ZIH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZIH)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ZIH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZIH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZIH)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZIH)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zih A  10 GGGPTSSEQIMKTGALLLQGFIQDRAGRDPVPQDASTKKLSESLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSY 164
                                    19        29       |49        59        69        79        89        99       109       119       129       139       149       159     
                                                      37|                                                                                                                    
                                                       48                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:16
                                                
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
                 Transcript ---------------- Transcript
                 4zih B 144 PEIWIAQELRRIGDEF 159
                                   153
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZIH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZIH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZIH)

(-) Gene Ontology  (180, 210)

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  4zih
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  B2L11_HUMAN | O43521
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  BAX_HUMAN | Q07812
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        B2L11_HUMAN | O43521: 1f95 2k7w 2nl9 2v6q 2vm6 2wh6 2yq6 2yq7 3d7v 3fdl 3io8 3io9 3kj0 3kj1 3kj2 4a1u 4a1w 4b4s 4d2m 4qvf 4uf3 4yj4 4zie 4zif 5agw 5agx 5c3g
        BAX_HUMAN | Q07812: 1f16 2g5b 2k7w 2lr1 3pk1 3pl7 4bd2 4bd6 4bd7 4bd8 4bdu 4s0o 4s0p 4uf2 4zie 4zif 4zig 4zii

(-) Related Entries Specified in the PDB File

4zie 4zif 4zig 4zii