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(-) Description

Title :  CRYSTAL STRUCTURE OF CORE/LATCH DIMER OF BAX IN COMPLEX WITH BIMBH3
 
Authors :  K. Krishna Kumar, A. Y. Robin, D. Westphal, A. Z. Wardak, G. V. Thompson G. Dewson, P. M. Colman, P. E. Czabotar
Date :  28 Apr 15  (Deposition) - 22 Jul 15  (Release) - 22 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,C
Biol. Unit 1:  A,C  (2x)
Keywords :  Bax, Apoptosis, Bh3 Domain, Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Y. Robin, K. Krishna Kumar, D. Westphal, A. Z. Wardak, G. V. Thompson, G. Dewson, P. M. Colman, P. E. Czabotar
Crystal Structure Of Bax Bound To The Bh3 Peptide Of Bim Identifies Important Contacts For Interaction.
Cell Death Dis V. 6 E1809 2015
PubMed-ID: 26158515  |  Reference-DOI: 10.1038/CDDIS.2015.141

(-) Compounds

Molecule 1 - APOPTOSIS REGULATOR BAX
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BAX, BCL2L4
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: BCL-2-LIKE PROTEIN 4,BCL2-L-4
 
Molecule 2 - BCL-2-LIKE PROTEIN 11
    Chains: C
    Engineered: YES
    Fragment: BH3 MOTIF, UNP RESIDUES 141-166
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: BCL2-L-11,BCL2-INTERACTING MEDIATOR OF CELL DEATH
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AC
Biological Unit 1 (2x): AC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1EDO1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:55 , THR A:56 , LEU A:59 , TRP A:158 , ASP A:159 , HOH A:310binding site for residue EDO A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZIE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ZIE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZIE)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4ZIE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:147
                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zie A  10 GGGPTSSEQIMKTGALLLQGFIQDRALDPVPQDASTKKLSESLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGS 167
                                    19        29     || 50        60        70        80        90       100       110       120       130       140       150       160       
                                                    35|                                                                                                                        
                                                     47                                                                                                                        


Chain C from PDB  Type:PROTEIN  Length:22
                                                      
               SCOP domains ---------------------- SCOP domains
               CATH domains ---------------------- CATH domains
               Pfam domains ---------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------- SAPs(SNPs)
                    PROSITE ---------------------- PROSITE
                 Transcript ---------------------- Transcript
                 4zie C 143 RPEIWIAQELRRIGDEFNAYYA 164
                                   152       162
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZIE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZIE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZIE)

(-) Gene Ontology  (180, 210)

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  4zie
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  BAX_HUMAN | Q07812
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        B2L11_HUMAN | O43521: 1f95 2k7w 2nl9 2v6q 2vm6 2wh6 2yq6 2yq7 3d7v 3fdl 3io8 3io9 3kj0 3kj1 3kj2 4a1u 4a1w 4b4s 4d2m 4qvf 4uf3 4yj4 4zif 4zih 5agw 5agx 5c3g
        BAX_HUMAN | Q07812: 1f16 2g5b 2k7w 2lr1 3pk1 3pl7 4bd2 4bd6 4bd7 4bd8 4bdu 4s0o 4s0p 4uf2 4zif 4zig 4zih 4zii

(-) Related Entries Specified in the PDB File

4zif 4zig 4zih 4zii