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(-) Description

Title :  MYOSIN VI MOTOR DOMAIN IN THE PPS STATE - FROM A PI RELEASE STATE CRYSTAL, SPACE GROUP P212121 AFTER LONG SOAKING WITH PO4
 
Authors :  T. Isabet, H. Benisty, P. Llinas, H. L. Sweeney, A. Houdusse
Date :  13 May 14  (Deposition) - 29 Apr 15  (Release) - 30 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.78
Chains :  Asym./Biol. Unit :  A
Keywords :  Motor Protein, Motor Domain, Pre Powerstroke State (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Llinas, T. Isabet, L. Song, V. Ropars, B. Zong, H. Benisty, S. Sirigu C. Morris, C. Kikuti, D. Safer, H. L. Sweeney, A. Houdusse
How Actin Initiates The Motor Activity Of Myosin.
Dev. Cell V. 33 401 2015
PubMed-ID: 25936506  |  Reference-DOI: 10.1016/J.DEVCEL.2015.03.025

(-) Compounds

Molecule 1 - UNCONVENTIONAL MYOSIN-VI
    Chains: A
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: RESIDUES 2-789
    Gene: MYO6
    Organism Common: PIG
    Organism Scientific: SUS SCROFA
    Organism Taxid: 9823

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric/Biological Unit (3, 3)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG1Ligand/IonMAGNESIUM ION
3PO41Ligand/IonPHOSPHATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:98 , PRO A:99 , PHE A:101 , TYR A:107 , SER A:153 , GLY A:154 , ALA A:155 , GLY A:156 , LYS A:157 , THR A:158 , GLU A:159 , PHE A:163 , ASN A:200 , LEU A:310 , MG A:802 , PO4 A:803 , HOH A:902 , HOH A:903 , HOH A:904binding site for residue ADP A 801
2AC2SOFTWARETHR A:158 , SER A:204 , ADP A:801 , PO4 A:803 , HOH A:902 , HOH A:903binding site for residue MG A 802
3AC3SOFTWARESER A:153 , LYS A:157 , ASN A:200 , SER A:203 , SER A:204 , GLY A:459 , ADP A:801 , MG A:802 , HOH A:902 , HOH A:903binding site for residue PO4 A 803

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PK4)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Lys A:550 -His A:551

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PK4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PK4)

(-) Exons   (0, 0)

(no "Exon" information available for 4PK4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:758
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...eeeeeeeeee...eeeeee.......eeee.hhhee..........hhhhh...hhhhhhhhhhhhhhh...eeee..eeeee..........hhhhhhhh..........hhhhhhhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhee.......ee..eeeeeeee.....eeeeeeeee...hhhhhh.......hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.eee.......eee...hhhhhhhhhhhh..hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhh.........hhhhh..hhhhhhhhh.eeeeee..eeeeee..hhhhhh....hhhhhhhhhh..hhhhhhhh.....hhhhhhhhhhhhhhhhhhhheeeeeeee...........hhhhhhhhhhhhhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee...eeee...hhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pk4 A   5 KPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFELSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL 788
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394||     415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615      |640       650       660       670       680       690       700       710       720       730       740       750       760       770       780        
                                                                                                                                                                                                                                                                                                                                                                                                                                395|                                                                                                                                                                                                                    622|                                                                                                                                                      
                                                                                                                                                                                                                                                                                                                                                                                                                                 407                                                                                                                                                                                                                     638
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PK4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PK4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PK4)

(-) Gene Ontology  (17, 17)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Lys A:550 - His A:551   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        F1RQI7_PIG | F1RQI7: 4dbp 4dbq 4dbr
UniProtKB/TrEMBL
        F1RQI7_PIG | F1RQI7: 4e7s 4e7z 4pfo 4pfp 4pjj 4pjl 4pjm 4pjn

(-) Related Entries Specified in the PDB File

4pfo