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(-) Description

Title :  CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH M344
 
Authors :  M. Marek, C. Romier
Date :  24 Jul 13  (Deposition) - 14 Aug 13  (Release) - 16 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Hydrolase, Platyhelminths, Inhibition (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Marek, S. Kannan, A. Hauser, M. Moraes Mourao, S. Caby, V. Cura, D. A. Stolfa, K. Schmidtkunz, J. Lancelot, L. Andrade, J. Renaud, G. Oliveira, W. Sippl, M. Jung, J. Cavarelli, R. J. Pierce, C. Romier
Structural Basis For The Inhibition Of Histone Deacetylase 8 (Hdac8), A Key Epigenetic Player In The Blood Fluke Schistosoma Mansoni.
Plos Pathog. V. 9 03645 2013
PubMed-ID: 24086136  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1003645

(-) Compounds

Molecule 1 - HISTONE DEACETYLASE 8
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PNEA/TH
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: SCHISTOSOMA MANSONI
    Organism Taxid: 6183

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 34)

Asymmetric Unit (4, 34)
No.NameCountTypeFull Name
1B3N8Ligand/Ion4-(DIMETHYLAMINO)-N-[7-(HYDROXYAMINO)-7-OXOHEPTYL]BENZAMIDE
2GOL14Ligand/IonGLYCEROL
3K8Ligand/IonPOTASSIUM ION
4ZN4Ligand/IonZINC ION
Biological Unit 1 (2, 5)
No.NameCountTypeFull Name
1B3N2Ligand/Ion4-(DIMETHYLAMINO)-N-[7-(HYDROXYAMINO)-7-OXOHEPTYL]BENZAMIDE
2GOL3Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4ZN-1Ligand/IonZINC ION
Biological Unit 2 (2, 5)
No.NameCountTypeFull Name
1B3N2Ligand/Ion4-(DIMETHYLAMINO)-N-[7-(HYDROXYAMINO)-7-OXOHEPTYL]BENZAMIDE
2GOL3Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4ZN-1Ligand/IonZINC ION
Biological Unit 3 (2, 6)
No.NameCountTypeFull Name
1B3N2Ligand/Ion4-(DIMETHYLAMINO)-N-[7-(HYDROXYAMINO)-7-OXOHEPTYL]BENZAMIDE
2GOL4Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4ZN-1Ligand/IonZINC ION
Biological Unit 4 (2, 6)
No.NameCountTypeFull Name
1B3N2Ligand/Ion4-(DIMETHYLAMINO)-N-[7-(HYDROXYAMINO)-7-OXOHEPTYL]BENZAMIDE
2GOL4Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4ZN-1Ligand/IonZINC ION

(-) Sites  (34, 34)

Asymmetric Unit (34, 34)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:186 , HIS A:188 , ASP A:285 , B3N A:700BINDING SITE FOR RESIDUE ZN A 500
02AC2SOFTWAREASP A:184 , ASP A:186 , HIS A:188 , SER A:207 , VAL A:208BINDING SITE FOR RESIDUE K A 600
03AC3SOFTWAREPHE A:197 , SER A:200 , VAL A:203 , SER A:243 , HOH A:2209BINDING SITE FOR RESIDUE K A 601
04AC4SOFTWARETYR A:99 , ASP A:100 , HIS A:141 , HIS A:142 , GLY A:150 , PHE A:151 , ASP A:186 , HIS A:188 , PHE A:216 , ASP A:285 , TYR A:341 , ZN A:500 , HOH A:2183 , PRO B:45 , PRO B:46 , GLN B:48 , HOH B:2053BINDING SITE FOR RESIDUE B3N A 700
05AC5SOFTWAREGLU A:131 , LEU A:327 , LYS A:330 , VAL A:331 , PRO A:332 , GLU A:360 , VAL A:361BINDING SITE FOR RESIDUE B3N A 701
06AC6SOFTWAREASN A:98 , TYR A:99 , ASP A:100 , CYS A:101 , SER A:149 , GLY A:150 , PHE A:216 , HOH A:2158 , HOH A:2191 , HOH B:2048 , HOH B:2053BINDING SITE FOR RESIDUE GOL A 800
07AC7SOFTWAREGLU A:147 , HOH A:2191 , HOH A:2230 , HOH A:2330 , ARG B:43 , PRO B:45 , PRO B:46 , HOH B:2009 , HOH B:2051BINDING SITE FOR RESIDUE GOL A 801
08AC8SOFTWAREHIS A:189 , GLU A:194 , THR A:219 , GLY A:220 , THR A:221 , ILE A:232 , PHE A:233 , LEU A:234 , ASN A:246BINDING SITE FOR RESIDUE GOL A 802
09AC9SOFTWAREASP B:186 , HIS B:188 , ASP B:285 , B3N B:700BINDING SITE FOR RESIDUE ZN B 500
10BC1SOFTWAREASP B:184 , ASP B:186 , HIS B:188 , SER B:207 , VAL B:208BINDING SITE FOR RESIDUE K B 600
11BC2SOFTWAREPHE B:197 , SER B:200 , VAL B:203 , SER B:243 , HOH B:2150BINDING SITE FOR RESIDUE K B 601
12BC3SOFTWAREPRO A:45 , PRO A:46 , LEU A:47 , GLN A:48 , HOH A:2082 , TYR B:99 , ASP B:100 , HIS B:141 , HIS B:142 , GLY B:150 , ASP B:186 , HIS B:188 , PHE B:216 , ASP B:285 , TYR B:341 , ZN B:500 , HOH B:2119BINDING SITE FOR RESIDUE B3N B 700
13BC4SOFTWAREGLU B:131 , LYS B:330 , VAL B:331 , GLU B:360 , VAL B:361 , LYS C:330 , HOH C:2230BINDING SITE FOR RESIDUE B3N B 701
14BC5SOFTWARECYS B:15 , PHE B:21 , ARG B:24 , TYR B:25 , TYR B:110 , GLY B:137 , TRP B:140 , HOH B:2015 , HOH B:2017 , HOH B:2029BINDING SITE FOR RESIDUE GOL B 800
15BC6SOFTWAREHOH A:2079 , HOH A:2082 , ASN B:98 , TYR B:99 , ASP B:100 , CYS B:101 , SER B:149 , GLY B:150 , PHE B:216 , HOH B:2097 , HOH B:2135BINDING SITE FOR RESIDUE GOL B 801
16BC7SOFTWAREHIS B:189 , GLU B:194 , GLY B:220 , THR B:221 , PHE B:233 , LEU B:234BINDING SITE FOR RESIDUE GOL B 802
17BC8SOFTWAREASP C:186 , HIS C:188 , ASP C:285 , B3N C:700BINDING SITE FOR RESIDUE ZN C 500
18BC9SOFTWAREASP C:184 , ASP C:186 , HIS C:188 , SER C:207 , VAL C:208BINDING SITE FOR RESIDUE K C 600
19CC1SOFTWAREPHE C:197 , SER C:200 , VAL C:203 , SER C:243 , HOH C:2153BINDING SITE FOR RESIDUE K C 601
20CC2SOFTWAREASP C:100 , HIS C:141 , HIS C:142 , GLY C:150 , PHE C:151 , ASP C:186 , HIS C:188 , PHE C:216 , ASP C:285 , TYR C:341 , ZN C:500 , HOH C:2124 , HOH C:2301 , PRO D:45 , PRO D:46 , LEU D:47 , GLN D:48 , SER D:123BINDING SITE FOR RESIDUE B3N C 700
21CC3SOFTWARELYS B:330 , HOH B:2221 , GLU C:131 , LYS C:330 , VAL C:331 , GLU C:360 , VAL C:361BINDING SITE FOR RESIDUE B3N C 701
22CC4SOFTWAREASN C:98 , TYR C:99 , ASP C:100 , CYS C:101 , SER C:149 , GLY C:150 , PHE C:216 , HOH C:2099 , HOH C:2101 , HOH C:2134 , HOH C:2301BINDING SITE FOR RESIDUE GOL C 800
23CC5SOFTWAREGLU C:147 , HOH C:2134 , HOH C:2168 , HOH C:2302 , HOH C:2303 , ARG D:43 , PRO D:45 , PRO D:46BINDING SITE FOR RESIDUE GOL C 801
24CC6SOFTWAREHIS C:189 , GLU C:194 , THR C:219 , GLY C:220 , THR C:221 , PHE C:233 , LEU C:234BINDING SITE FOR RESIDUE GOL C 802
25CC7SOFTWARELYS A:82 , TYR C:35 , LYS C:36 , LEU C:37 , MET C:366 , THR C:367 , HOH C:2042BINDING SITE FOR RESIDUE GOL C 803
26CC8SOFTWAREASP D:186 , HIS D:188 , ASP D:285 , B3N D:700BINDING SITE FOR RESIDUE ZN D 500
27CC9SOFTWAREASP D:184 , ASP D:186 , HIS D:188 , SER D:207 , VAL D:208BINDING SITE FOR RESIDUE K D 600
28DC1SOFTWAREPHE D:197 , SER D:200 , VAL D:203 , SER D:243 , HOH D:2141BINDING SITE FOR RESIDUE K D 601
29DC2SOFTWAREPRO C:45 , PRO C:46 , LEU C:47 , GLN C:48 , HOH C:2053 , TYR D:99 , ASP D:100 , HIS D:141 , HIS D:142 , GLY D:150 , ASP D:186 , HIS D:188 , PHE D:216 , ASP D:285 , TYR D:341 , ZN D:500 , HOH D:2118BINDING SITE FOR RESIDUE B3N D 700
30DC3SOFTWAREARG A:296 , GLU D:131 , LEU D:327 , LYS D:330 , VAL D:331 , GLU D:360 , VAL D:361BINDING SITE FOR RESIDUE B3N D 701
31DC4SOFTWARECYS D:15 , PHE D:21 , ARG D:24 , TYR D:25 , TYR D:110 , GLY D:137 , TRP D:140 , HOH D:2014 , HOH D:2024BINDING SITE FOR RESIDUE GOL D 800
32DC5SOFTWAREHOH C:2053 , ASN D:98 , TYR D:99 , ASP D:100 , CYS D:101 , SER D:149 , GLY D:150 , PHE D:216 , HOH D:2095 , HOH D:2124 , HOH D:2244BINDING SITE FOR RESIDUE GOL D 801
33DC6SOFTWAREARG C:43 , PRO C:45 , HOH C:2050 , GLU D:147 , HOH D:2124 , HOH D:2159 , HOH D:2245BINDING SITE FOR RESIDUE GOL D 802
34DC7SOFTWAREHIS D:189 , GLU D:194 , THR D:219 , GLY D:220 , THR D:221 , ILE D:232 , PHE D:233 , LEU D:234BINDING SITE FOR RESIDUE GOL D 803

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4BZ7)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Phe A:216 -Pro A:217
2Gly A:382 -Pro A:383
3Phe B:216 -Pro B:217
4Gly B:382 -Pro B:383
5Phe C:216 -Pro C:217
6Gly C:382 -Pro C:383
7Phe D:216 -Pro D:217
8Gly D:382 -Pro D:383

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4BZ7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4BZ7)

(-) Exons   (0, 0)

(no "Exon" information available for 4BZ7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:399
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:434
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431    
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh...-------...eeeee.....hhhhhhhh.....eeeeeeee.............--------.....hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................------------..hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh...........--------hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz7 A   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTP-------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWN--------IFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP------------SLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFP--------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       | -     | 181       191       201       211       221 |       -|      241       251       261       271       281       291       301|        -   |   321       331       341       351       361       371       381       391 |       -|      411       421       431    
                                                                                                                                                                                                 169     177                                           223      232                                                                   302          315                                                                           393      402                                 


Chain B from PDB  Type:PROTEIN  Length:413
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:445
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                440      
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        |-     
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGM------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.---.hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh.---------...eeeee.....hhhhhhhh.....eeeeeeee.............------.......hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................---------.....hhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh............-----....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz7 B   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCE---LTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSS---------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWN------LPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP---------SECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPH-----TLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        |-  |     91       101       111       121       131       141       151       161     |   -     | 181       191       201       211       221 |     231       241       251       261       271       281       291       301|        -|      321       331       341       351       361       371       381       391  |    401       411       421       431       441     
                                                                                                         80  84                                                                                167       177                                           223    230                                                                     302       312                                                                               394   400                                              


Chain C from PDB  Type:PROTEIN  Length:416
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:445
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                440      
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        |-     
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGM------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.--..hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh.----------..eeeee.....hhhhhhhh.....eeeeeeee..............----........hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................---------.....hhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh.............----....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz7 C   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCE--ELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSS----------TRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNM----KLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP---------SECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHE----TLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        |- |      91       101       111       121       131       141       151       161     |   -      |181       191       201       211       221  |    231       241       251       261       271       281       291       301|        -|      321       331       341       351       361       371       381       391   |   401       411       421       431       441     
                                                                                                         80 83                                                                                 167        178                                           224  229                                                                      302       312                                                                                395  400                                              


Chain D from PDB  Type:PROTEIN  Length:399
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:434
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431    
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh..--------...eeeee.....hhhhhhhh.....eeeeeeee.............-------......hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................------------..hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh...........--------hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz7 D   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSST--------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWN-------PIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP------------SLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFP--------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161      |  -     | 181       191       201       211       221 |     231       241       251       261       271       281       291       301|        -   |   321       331       341       351       361       371       381       391 |       -|      411       421       431    
                                                                                                                                                                                                168      177                                           223     231                                                                    302          315                                                                           393      402
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(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4BZ7)

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(no "CATH Domain" information available for 4BZ7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4BZ7)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (A5H660_SCHMA | A5H660)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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  4bz7
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  A5H660_SCHMA | A5H660
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A5H660_SCHMA | A5H660: 4bz5 4bz6 4bz8 4bz9 4cqf 5fue

(-) Related Entries Specified in the PDB File

4bz5 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8
4bz6 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH SAHA
4bz8 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH J1038
4bz9 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH J1075