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(-) Description

Title :  CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH A MERCAPTOACETAMIDE INHIBITOR
 
Authors :  M. Marek, C. Romier
Date :  14 Feb 14  (Deposition) - 02 Apr 14  (Release) - 08 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Hydrolase, Structural Protein, Eukaryotes, Platyhelminths, Epigenetics, Histone Deacetylases, Inhibition (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. A. Stolfa, M. Marek, J. Lancelot, A. T. Hauser, A. Walter, E. Leproult, J. Melesina, T. Rumpf, J. M. Wurtz, J. Cavarelli, W. Sippl R. J. Pierce, C. Romier, M. Jung
Molecular Basis For The Anti-Parasitic Activity Of A Mercaptoacetamide Derivative That Inhibits Histone Deacetylase 8 (Hdac8) From The Human Pathogen Schistosoma Mansoni
J. Mol. Biol. V. 426 3442 2014
PubMed-ID: 24657767  |  Reference-DOI: 10.1016/J.JMB.2014.03.007

(-) Compounds

Molecule 1 - HISTONE DEACETYLASE 8
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PNEA/TH
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: SCHISTOSOMA MANSONI
    Organism Taxid: 6183

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 34)

Asymmetric Unit (5, 34)
No.NameCountTypeFull Name
19Z84Ligand/Ion6-(2-MERCAPTOACETYLAMINO)-N-PHENYLHEXANAMIDE
2DMF11Ligand/IonDIMETHYLFORMAMIDE
3GOL7Ligand/IonGLYCEROL
4K8Ligand/IonPOTASSIUM ION
5ZN4Ligand/IonZINC ION
Biological Unit 1 (2, 3)
No.NameCountTypeFull Name
19Z81Ligand/Ion6-(2-MERCAPTOACETYLAMINO)-N-PHENYLHEXANAMIDE
2DMF2Ligand/IonDIMETHYLFORMAMIDE
3GOL-1Ligand/IonGLYCEROL
4K-1Ligand/IonPOTASSIUM ION
5ZN-1Ligand/IonZINC ION
Biological Unit 2 (3, 6)
No.NameCountTypeFull Name
19Z81Ligand/Ion6-(2-MERCAPTOACETYLAMINO)-N-PHENYLHEXANAMIDE
2DMF3Ligand/IonDIMETHYLFORMAMIDE
3GOL2Ligand/IonGLYCEROL
4K-1Ligand/IonPOTASSIUM ION
5ZN-1Ligand/IonZINC ION
Biological Unit 3 (3, 8)
No.NameCountTypeFull Name
19Z81Ligand/Ion6-(2-MERCAPTOACETYLAMINO)-N-PHENYLHEXANAMIDE
2DMF4Ligand/IonDIMETHYLFORMAMIDE
3GOL3Ligand/IonGLYCEROL
4K-1Ligand/IonPOTASSIUM ION
5ZN-1Ligand/IonZINC ION
Biological Unit 4 (3, 5)
No.NameCountTypeFull Name
19Z81Ligand/Ion6-(2-MERCAPTOACETYLAMINO)-N-PHENYLHEXANAMIDE
2DMF2Ligand/IonDIMETHYLFORMAMIDE
3GOL2Ligand/IonGLYCEROL
4K-1Ligand/IonPOTASSIUM ION
5ZN-1Ligand/IonZINC ION

(-) Sites  (34, 34)

Asymmetric Unit (34, 34)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:186 , HIS A:188 , ASP A:285 , 9Z8 A:700BINDING SITE FOR RESIDUE ZN A 500
02AC2SOFTWAREPHE A:197 , SER A:200 , VAL A:203 , SER A:243 , HOH A:2067BINDING SITE FOR RESIDUE K A 600
03AC3SOFTWAREASP A:184 , ASP A:186 , HIS A:188 , SER A:207 , VAL A:208BINDING SITE FOR RESIDUE K A 601
04AC4SOFTWARETYR A:99 , ASP A:100 , HIS A:141 , HIS A:142 , GLY A:150 , PHE A:151 , ASP A:186 , HIS A:188 , PHE A:216 , ASP A:285 , TYR A:341 , ZN A:500BINDING SITE FOR RESIDUE 9Z8 A 700
05AC5SOFTWARESER A:18 , PRO A:19 , LYS A:20 , ASP A:100 , PHE A:104 , TYR A:110 , PHE A:151 , TYR A:153BINDING SITE FOR RESIDUE DMF A 800
06AC6SOFTWAREARG A:352 , GLU A:359 , MET A:366 , ILE A:368BINDING SITE FOR RESIDUE DMF A 801
07AC7SOFTWAREASP B:186 , HIS B:188 , ASP B:285 , 9Z8 B:700BINDING SITE FOR RESIDUE ZN B 500
08AC8SOFTWAREPHE B:197 , SER B:200 , VAL B:203 , SER B:243 , HOH B:2049BINDING SITE FOR RESIDUE K B 600
09AC9SOFTWAREASP B:184 , ASP B:186 , HIS B:188 , SER B:207 , VAL B:208BINDING SITE FOR RESIDUE K B 601
10BC1SOFTWARETYR B:99 , ASP B:100 , HIS B:141 , HIS B:142 , GLY B:150 , PHE B:151 , ASP B:186 , HIS B:188 , PHE B:216 , ASP B:285 , GLY B:339 , TYR B:341 , ZN B:500BINDING SITE FOR RESIDUE 9Z8 B 700
11BC2SOFTWARESER B:18 , PRO B:19 , LYS B:20 , PHE B:21 , ASP B:100 , PHE B:104 , TYR B:110 , PHE B:151 , TYR B:153BINDING SITE FOR RESIDUE DMF B 800
12BC3SOFTWARETYR B:7 , ASP B:30 , ILE B:38 , HOH B:2018BINDING SITE FOR RESIDUE DMF B 801
13BC4SOFTWAREASP A:93 , SER A:94 , ARG B:43 , HOH B:2016BINDING SITE FOR RESIDUE DMF B 802
14BC5SOFTWAREALA B:58 , ALA B:61 , LEU B:119 , LEU B:159 , HIS B:162 , ARG B:163 , HOH B:2019 , HOH B:2043BINDING SITE FOR RESIDUE GOL B 901
15BC6SOFTWAREHIS B:189 , GLU B:194 , GLY B:220 , THR B:221 , ILE B:232 , PHE B:233 , LEU B:234 , ASN B:246 , HOH B:2059BINDING SITE FOR RESIDUE GOL B 902
16BC7SOFTWAREASP C:186 , HIS C:188 , ASP C:285 , 9Z8 C:700BINDING SITE FOR RESIDUE ZN C 500
17BC8SOFTWAREASP C:184 , ASP C:186 , HIS C:188 , SER C:207 , VAL C:208BINDING SITE FOR RESIDUE K C 600
18BC9SOFTWAREPHE C:197 , SER C:200 , VAL C:203 , SER C:243 , HOH C:2065BINDING SITE FOR RESIDUE K C 601
19CC1SOFTWARETYR C:99 , ASP C:100 , HIS C:141 , HIS C:142 , GLY C:150 , PHE C:151 , ASP C:186 , HIS C:188 , PHE C:216 , TYR C:341 , ZN C:500 , HOH C:2044 , HOH C:2102BINDING SITE FOR RESIDUE 9Z8 C 700
20CC2SOFTWARESER C:18 , PRO C:19 , LYS C:20 , PHE C:21 , ASP C:100 , PHE C:104 , TYR C:110 , PHE C:151 , TYR C:153BINDING SITE FOR RESIDUE DMF C 800
21CC3SOFTWARETYR C:7 , MET C:29 , ASP C:30 , ASN C:33 , ILE C:38BINDING SITE FOR RESIDUE DMF C 801
22CC4SOFTWAREARG C:43 , HOH C:2022 , ASP D:93 , SER D:94 , SER D:96BINDING SITE FOR RESIDUE DMF C 802
23CC5SOFTWAREGLU C:131 , LYS C:330 , VAL C:331 , VAL C:361BINDING SITE FOR RESIDUE DMF C 803
24CC6SOFTWARECYS C:15 , PHE C:21 , GLY C:22 , ARG C:24 , TYR C:25 , TYR C:110 , TRP C:136 , TRP C:140 , HOH C:2008BINDING SITE FOR RESIDUE GOL C 900
25CC7SOFTWAREHIS C:189 , GLU C:194 , THR C:219 , GLY C:220 , THR C:221 , PHE C:233 , LEU C:234 , HOH C:2076BINDING SITE FOR RESIDUE GOL C 901
26CC8SOFTWARETYR C:301 , ARG C:352 , MET C:366 , THR C:367 , ILE C:368BINDING SITE FOR RESIDUE GOL C 902
27CC9SOFTWAREASP D:186 , HIS D:188 , ASP D:285 , 9Z8 D:700BINDING SITE FOR RESIDUE ZN D 500
28DC1SOFTWAREPHE D:197 , SER D:200 , VAL D:203 , SER D:243 , HOH D:2046BINDING SITE FOR RESIDUE K D 600
29DC2SOFTWAREASP D:184 , ASP D:186 , HIS D:188 , SER D:207 , VAL D:208BINDING SITE FOR RESIDUE K D 601
30DC3SOFTWARETYR D:99 , ASP D:100 , HIS D:141 , HIS D:142 , GLY D:150 , PHE D:151 , ASP D:186 , HIS D:188 , PHE D:216 , TYR D:341 , ZN D:500BINDING SITE FOR RESIDUE 9Z8 D 700
31DC4SOFTWARESER D:18 , PRO D:19 , LYS D:20 , PHE D:21 , ASP D:100 , PHE D:104 , TYR D:110 , PHE D:151 , TYR D:153BINDING SITE FOR RESIDUE DMF D 800
32DC5SOFTWAREGLU D:131 , VAL D:132 , LYS D:330 , VAL D:331 , VAL D:361BINDING SITE FOR RESIDUE DMF D 801
33DC6SOFTWAREHIS D:189 , GLU D:194 , THR D:219 , GLY D:220 , THR D:221 , ASN D:223 , ILE D:232 , PHE D:233 , LEU D:234 , ASN D:246BINDING SITE FOR RESIDUE GOL D 900
34DC7SOFTWAREPRO C:291 , HIS C:292 , SER D:51 , ARG D:54BINDING SITE FOR RESIDUE GOL D 901

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4CQF)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Phe A:216 -Pro A:217
2Gly A:382 -Pro A:383
3Phe B:216 -Pro B:217
4Gly B:382 -Pro B:383
5Phe C:216 -Pro C:217
6Gly C:382 -Pro C:383
7Phe D:216 -Pro D:217
8Gly D:382 -Pro D:383

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4CQF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4CQF)

(-) Exons   (0, 0)

(no "Exon" information available for 4CQF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:398
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:434
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431    
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh.---------...eeeee.....hhhhhhhh.....eeeeeeee..............-------.....hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.hhhh................------------..hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh...........--------hhhhhhhhhhhhhhhhhhhhh....hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cqf A   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSS---------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNM-------IFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP------------SLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFP--------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     |   -     | 181       191       201       211       221  |      -|      241       251       261       271       281       291       301|        -   |   321       331       341       351       361       371       381       391 |       -|      411       421       431    
                                                                                                                                                                                               167       177                                            224     232                                                                   302          315                                                                           393      402                                 


Chain B from PDB  Type:PROTEIN  Length:413
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:445
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                440      
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        |-     
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGM------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.---.hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh.---------...eeeee.....hhhhhhhh.....eeeeeeee.............-----........hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.hhhh................--------......hhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh............-------..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cqf B   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCE---LTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSS---------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWN-----KLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP--------DSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPH-------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        |-  |     91       101       111       121       131       141       151       161     |   -     | 181       191       201       211       221 |     231       241       251       261       271       281       291       301|      311       321       331       341       351       361       371       381       391  |      -|      411       421       431       441     
                                                                                                         80  84                                                                                167       177                                           223   229                                                                      302      311                                                                                394     402                                            


Chain C from PDB  Type:PROTEIN  Length:417
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:445
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                440      
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        |-     
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGM------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.---.hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh..--------...eeeee.....hhhhhhhh.....eeeeeeee..............----........hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.hhhh.................--------.....hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh............-----....hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cqf C   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCE---LTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSST--------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNM----KLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPN--------SECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPH-----TLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        |-  |     91       101       111       121       131       141       151       161      |  -     | 181       191       201       211       221  |    231       241       251       261       271       281       291       301 |       -|      321       331       341       351       361       371       381       391  |    401       411       421       431       441     
                                                                                                         80  84                                                                                 168      177                                            224  229                                                                       303      312                                                                               394   400                                              


Chain D from PDB  Type:PROTEIN  Length:400
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:434
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431    
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh..--------...eeeee.....hhhhhhhh.....eeeeeeee.............-------......hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.hhhh.................-----------..hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh...........--------hhhhhhhhhhhhhhhhhhhhh....hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cqf D   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSST--------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWN-------PIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPN-----------SLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFP--------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161      |  -     | 181       191       201       211       221 |     231       241       251       261       271       281       291       301 |       -   |   321       331       341       351       361       371       381       391 |       -|      411       421       431    
                                                                                                                                                                                                168      177                                           223     231                                                                     303         315                                                                           393      402
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4CQF)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4CQF)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4CQF)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (A5H660_SCHMA | A5H660)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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  4cqf
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  A5H660_SCHMA | A5H660
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A5H660_SCHMA | A5H660: 4bz5 4bz6 4bz7 4bz8 4bz9 5fue

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4CQF)