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(-) Description

Title :  CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH SAHA
 
Authors :  M. Marek, C. Romier
Date :  24 Jul 13  (Deposition) - 14 Aug 13  (Release) - 16 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Hydrolase, Platyhelminths, Inhibition (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Marek, S. Kannan, A. Hauser, M. Moraes Mourao, S. Caby, V. Cura, D. A. Stolfa, K. Schmidtkunz, J. Lancelot, L. Andrade, J. Renaud, G. Oliveira, W. Sippl, M. Jung, J. Cavarelli, R. J. Pierce, C. Romier
Structural Basis For The Inhibition Of Histone Deacetylase 8 (Hdac8), A Key Epigenetic Player In The Blood Fluke Schistosoma Mansoni.
Plos Pathog. V. 9 03645 2013
PubMed-ID: 24086136  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1003645

(-) Compounds

Molecule 1 - HISTONE DEACETYLASE 8
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PNEA/TH
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: SCHISTOSOMA MANSONI
    Organism Taxid: 6183

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 23)

Asymmetric Unit (5, 23)
No.NameCountTypeFull Name
1DMF3Ligand/IonDIMETHYLFORMAMIDE
2GOL4Ligand/IonGLYCEROL
3K8Ligand/IonPOTASSIUM ION
4SHH4Ligand/IonOCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE
5ZN4Ligand/IonZINC ION
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1DMF-1Ligand/IonDIMETHYLFORMAMIDE
2GOL1Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4SHH1Ligand/IonOCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE
5ZN-1Ligand/IonZINC ION
Biological Unit 2 (3, 4)
No.NameCountTypeFull Name
1DMF2Ligand/IonDIMETHYLFORMAMIDE
2GOL1Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4SHH1Ligand/IonOCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE
5ZN-1Ligand/IonZINC ION
Biological Unit 3 (3, 3)
No.NameCountTypeFull Name
1DMF1Ligand/IonDIMETHYLFORMAMIDE
2GOL1Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4SHH1Ligand/IonOCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE
5ZN-1Ligand/IonZINC ION
Biological Unit 4 (2, 2)
No.NameCountTypeFull Name
1DMF-1Ligand/IonDIMETHYLFORMAMIDE
2GOL1Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4SHH1Ligand/IonOCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE
5ZN-1Ligand/IonZINC ION

(-) Sites  (23, 23)

Asymmetric Unit (23, 23)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:186 , HIS A:188 , ASP A:285 , SHH A:700BINDING SITE FOR RESIDUE ZN A 500
02AC2SOFTWAREASP A:184 , ASP A:186 , HIS A:188 , SER A:207 , VAL A:208BINDING SITE FOR RESIDUE K A 600
03AC3SOFTWAREPHE A:197 , SER A:200 , VAL A:203 , SER A:243 , HOH A:2154BINDING SITE FOR RESIDUE K A 601
04AC4SOFTWAREHIS A:189 , GLU A:194 , THR A:219 , GLY A:220 , THR A:221 , ASN A:223 , ILE A:232 , PHE A:233 , LEU A:234BINDING SITE FOR RESIDUE GOL A 651
05AC5SOFTWARELYS A:20 , HIS A:141 , HIS A:142 , GLY A:150 , ASP A:186 , HIS A:188 , ASP A:285 , PRO A:291 , HIS A:292 , TYR A:341 , ZN A:500 , HOH A:2134 , ASP B:50BINDING SITE FOR RESIDUE SHH A 700
06AC6SOFTWAREASP B:186 , HIS B:188 , ASP B:285 , SHH B:700BINDING SITE FOR RESIDUE ZN B 500
07AC7SOFTWAREASP B:184 , ASP B:186 , HIS B:188 , SER B:207 , VAL B:208BINDING SITE FOR RESIDUE K B 600
08AC8SOFTWAREPHE B:197 , SER B:200 , VAL B:203 , SER B:243 , HOH B:2131BINDING SITE FOR RESIDUE K B 601
09AC9SOFTWAREHIS B:189 , GLU B:194 , THR B:219 , GLY B:220 , THR B:221 , PHE B:233 , LEU B:234BINDING SITE FOR RESIDUE GOL B 651
10BC1SOFTWARETYR B:7 , MET B:29 , ASP B:30 , ILE B:38BINDING SITE FOR RESIDUE DMF B 652
11BC2SOFTWAREARG B:12 , TYR B:377BINDING SITE FOR RESIDUE DMF B 653
12BC3SOFTWAREASP A:50 , LYS B:20 , HIS B:141 , HIS B:142 , GLY B:150 , ASP B:186 , HIS B:188 , ASP B:285 , PRO B:291 , HIS B:292 , TYR B:341 , ZN B:500 , HOH B:2106BINDING SITE FOR RESIDUE SHH B 700
13BC4SOFTWAREASP C:186 , HIS C:188 , ASP C:285 , SHH C:700BINDING SITE FOR RESIDUE ZN C 500
14BC5SOFTWAREASP C:184 , ASP C:186 , HIS C:188 , SER C:207 , VAL C:208BINDING SITE FOR RESIDUE K C 600
15BC6SOFTWAREPHE C:197 , SER C:200 , VAL C:203 , SER C:243 , HOH C:2128BINDING SITE FOR RESIDUE K C 601
16BC7SOFTWAREHIS C:189 , GLU C:194 , GLY C:220 , THR C:221 , PHE C:233 , LEU C:234BINDING SITE FOR RESIDUE GOL C 651
17BC8SOFTWARETYR C:7 , ARG C:12 , ASP C:30 , ILE C:38BINDING SITE FOR RESIDUE DMF C 652
18BC9SOFTWARELYS C:20 , HIS C:141 , HIS C:142 , GLY C:150 , ASP C:186 , HIS C:188 , PHE C:216 , ASP C:285 , PRO C:291 , HIS C:292 , TYR C:341 , ZN C:500BINDING SITE FOR RESIDUE SHH C 700
19CC1SOFTWAREASP D:186 , HIS D:188 , ASP D:285 , SHH D:700BINDING SITE FOR RESIDUE ZN D 500
20CC2SOFTWAREASP D:184 , ASP D:186 , HIS D:188 , SER D:207 , VAL D:208BINDING SITE FOR RESIDUE K D 600
21CC3SOFTWAREPHE D:197 , SER D:200 , VAL D:203 , SER D:243 , HOH D:2128BINDING SITE FOR RESIDUE K D 601
22CC4SOFTWAREHIS D:189 , GLU D:194 , GLY D:220 , THR D:221 , ASN D:223 , ILE D:232 , PHE D:233 , LEU D:234BINDING SITE FOR RESIDUE GOL D 651
23CC5SOFTWAREASP C:50 , LYS D:20 , HIS D:141 , HIS D:142 , ASP D:186 , HIS D:188 , PHE D:216 , ASP D:285 , PRO D:291 , HIS D:292 , TYR D:341 , ZN D:500 , HOH D:2107BINDING SITE FOR RESIDUE SHH D 700

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4BZ6)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Phe A:216 -Pro A:217
2Gly A:382 -Pro A:383
3Phe B:216 -Pro B:217
4Gly B:382 -Pro B:383
5Phe C:216 -Pro C:217
6Gly C:382 -Pro C:383
7Phe D:216 -Pro D:217
8Gly D:382 -Pro D:383

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4BZ6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4BZ6)

(-) Exons   (0, 0)

(no "Exon" information available for 4BZ6)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:397
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:434
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431    
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh.---------...eeeee.....hhhhhhhh.....eeeeeeee..............-------.....hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................------------..hhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh..........---------hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz6 A   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSS---------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNM-------IFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP------------SLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYF---------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     |   -     | 181       191       201       211       221  |      -|      241       251       261       271       281       291       301|        -   |   321       331       341       351       361       371       381       391|        -|      411       421       431    
                                                                                                                                                                                               167       177                                            224     232                                                                   302          315                                                                          392       402                                 


Chain B from PDB  Type:PROTEIN  Length:410
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:445
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                440      
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        |-     
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGM------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.---.hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh..--------...eeeee.....hhhhhhhh.....eeeeeeee.............------.......hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................-----------...hhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh............-------..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz6 B   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCE---LTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSST--------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWN------LPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP-----------CSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPH-------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        |-  |     91       101       111       121       131       141       151       161      |  -     | 181       191       201       211       221 |     231       241       251       261       271       281       291       301|        -  |    321       331       341       351       361       371       381       391  |      -|      411       421       431       441     
                                                                                                         80  84                                                                                 168      177                                           223    230                                                                     302         314                                                                             394     402                                            


Chain C from PDB  Type:PROTEIN  Length:414
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:445
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                440      
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        |-     
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGM------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhhh--..hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh..--------...eeeee.....hhhhhhhh.....eeeeeeee...............----.......hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................-----------...hhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh.............------..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz6 C   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCE--ELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSST--------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMV----LPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP-----------CSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHE------DSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        |- |      91       101       111       121       131       141       151       161      |  -     | 181       191       201       211       221   |   231       241       251       261       271       281       291       301|        -  |    321       331       341       351       361       371       381       391   |     -|      411       421       431       441     
                                                                                                         80 83                                                                                  168      177                                             225  230                                                                     302         314                                                                              395    402                                            


Chain D from PDB  Type:PROTEIN  Length:401
 aligned with A5H660_SCHMA | A5H660 from UniProtKB/TrEMBL  Length:440

    Alignment length:434
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431    
         A5H660_SCHMA     2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTPPETSPNRQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMVDNDKLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPNLNLDSDCDSECSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHESHNKTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh..--------...eeeee.....hhhhhhhh.....eeeeeeee..............------......hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.....................------------..hhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh...........-------hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bz6 D   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSST--------QTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNM------PIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYP------------SLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFP-------LDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161      |  -     | 181       191       201       211       221  |    231       241       251       261       271       281       291       301|        -   |   321       331       341       351       361       371       381       391 |     401       411       421       431    
                                                                                                                                                                                                168      177                                            224    231                                                                    302          315                                                                           393     401
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4BZ6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4BZ6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4BZ6)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (A5H660_SCHMA | A5H660)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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  4bz6
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  A5H660_SCHMA | A5H660
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A5H660_SCHMA | A5H660: 4bz5 4bz7 4bz8 4bz9 4cqf 5fue

(-) Related Entries Specified in the PDB File

4bz5 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8
4bz7 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH M344
4bz8 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH J1038
4bz9 CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH J1075