Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI HDAC8 COMPLEXED WITH 3-BENZAMIDO-BENZOHYDROXAMATE
 
Authors :  M. Marek, C. Romier
Date :  26 Jan 16  (Deposition) - 09 Mar 16  (Release) - 06 Apr 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Hydrolase, Platyhelminths, Inhibition, Histone, Deacetylation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Heimburg, A. Chakrabarti, J. Lancelot, M. Marek, J. Melesina, A. T. Hauser, T. B. Shaik, S. Duclaud, D. Robaa, F. Erdmann, M. Schmidt, C. Romier, R. J. Pierce, M. Jung, W. Sippl
Structure-Based Design And Synthesis Of Novel Inhibitors Targeting Hdac8 From Schistosoma Mansoni For The Treatment Of Schistosomiasis.
J. Med. Chem. V. 59 2423 2016
PubMed-ID: 26937828  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.5B01478

(-) Compounds

Molecule 1 - HISTONE DEACETYLASE 8
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PNEA-TH
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET-MCN
    Expression System Vector Type: PLASMID
    Organism Scientific: SCHISTOSOMA MANSONI
    Organism Taxid: 6183

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 30)

Asymmetric Unit (5, 30)
No.NameCountTypeFull Name
1DMF5Ligand/IonDIMETHYLFORMAMIDE
2GOL9Ligand/IonGLYCEROL
3K8Ligand/IonPOTASSIUM ION
4UV44Ligand/Ion3-(BENZOYLAMINO)-N-OXOBENZAMIDE
5ZN4Ligand/IonZINC ION
Biological Unit 1 (2, 3)
No.NameCountTypeFull Name
1DMF-1Ligand/IonDIMETHYLFORMAMIDE
2GOL2Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4UV41Ligand/Ion3-(BENZOYLAMINO)-N-OXOBENZAMIDE
5ZN-1Ligand/IonZINC ION
Biological Unit 2 (3, 4)
No.NameCountTypeFull Name
1DMF2Ligand/IonDIMETHYLFORMAMIDE
2GOL1Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4UV41Ligand/Ion3-(BENZOYLAMINO)-N-OXOBENZAMIDE
5ZN-1Ligand/IonZINC ION
Biological Unit 3 (3, 6)
No.NameCountTypeFull Name
1DMF2Ligand/IonDIMETHYLFORMAMIDE
2GOL3Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4UV41Ligand/Ion3-(BENZOYLAMINO)-N-OXOBENZAMIDE
5ZN-1Ligand/IonZINC ION
Biological Unit 4 (3, 5)
No.NameCountTypeFull Name
1DMF1Ligand/IonDIMETHYLFORMAMIDE
2GOL3Ligand/IonGLYCEROL
3K-1Ligand/IonPOTASSIUM ION
4UV41Ligand/Ion3-(BENZOYLAMINO)-N-OXOBENZAMIDE
5ZN-1Ligand/IonZINC ION

(-) Sites  (30, 30)

Asymmetric Unit (30, 30)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:186 , HIS A:188 , ASP A:285 , UV4 A:700BINDING SITE FOR RESIDUE ZN A 500
02AC2SOFTWAREASP A:184 , ASP A:186 , HIS A:188 , SER A:207 , VAL A:208BINDING SITE FOR RESIDUE K A 600
03AC3SOFTWAREPHE A:197 , SER A:200 , VAL A:203 , SER A:243 , HOH A:2089BINDING SITE FOR RESIDUE K A 601
04AC4SOFTWARELYS A:20 , HIS A:141 , HIS A:142 , ASP A:186 , HIS A:188 , PHE A:216 , ASP A:285 , HIS A:292 , GLY A:339 , TYR A:341 , ZN A:500 , ASP B:50BINDING SITE FOR RESIDUE UV4 A 700
05AC5SOFTWAREHIS A:188 , HIS A:189 , HIS A:210 , ALA A:211 , SER A:212 , PHE A:215 , PHE A:216 , PRO A:217 , GLY A:218 , THR A:219 , HOH A:2094BINDING SITE FOR RESIDUE GOL A 800
06AC6SOFTWAREHIS A:189 , GLU A:194 , THR A:219 , GLY A:220 , THR A:221 , ASN A:223 , PHE A:233 , LEU A:234 , ASN A:246BINDING SITE FOR RESIDUE GOL A 801
07AC7SOFTWAREASP B:186 , HIS B:188 , ASP B:285 , UV4 B:700BINDING SITE FOR RESIDUE ZN B 500
08AC8SOFTWAREASP B:184 , ASP B:186 , HIS B:188 , SER B:207 , VAL B:208BINDING SITE FOR RESIDUE K B 600
09AC9SOFTWAREPHE B:197 , SER B:200 , VAL B:203 , SER B:243 , HOH B:2068BINDING SITE FOR RESIDUE K B 601
10BC1SOFTWAREASP A:50 , LYS B:20 , HIS B:141 , HIS B:142 , GLY B:150 , ASP B:186 , HIS B:188 , PHE B:216 , ASP B:285 , HIS B:292 , GLY B:339 , TYR B:341 , ZN B:500BINDING SITE FOR RESIDUE UV4 B 700
11BC2SOFTWAREHIS B:189 , GLU B:194 , GLY B:220 , THR B:221 , PHE B:233 , LEU B:234 , ASN B:246BINDING SITE FOR RESIDUE GOL B 801
12BC3SOFTWARETYR B:7 , MET B:29 , ASP B:30 , ILE B:38BINDING SITE FOR RESIDUE DMF B 900
13BC4SOFTWARETYR B:301 , ARG B:352 , GLU B:359BINDING SITE FOR RESIDUE DMF B 901
14BC5SOFTWAREASP C:186 , HIS C:188 , ASP C:285 , UV4 C:700BINDING SITE FOR RESIDUE ZN C 500
15BC6SOFTWAREASP C:184 , ASP C:186 , HIS C:188 , SER C:207 , VAL C:208BINDING SITE FOR RESIDUE K C 600
16BC7SOFTWAREPHE C:197 , SER C:200 , VAL C:203 , SER C:243 , HOH C:2061BINDING SITE FOR RESIDUE K C 601
17BC8SOFTWARELYS C:20 , HIS C:141 , HIS C:142 , ASP C:186 , HIS C:188 , ASP C:285 , PRO C:291 , HIS C:292 , GLY C:339 , TYR C:341 , ZN C:500 , ASP D:50BINDING SITE FOR RESIDUE UV4 C 700
18BC9SOFTWAREHIS C:189 , GLU C:194 , GLY C:220 , THR C:221 , PHE C:233 , LEU C:234BINDING SITE FOR RESIDUE GOL C 800
19CC1SOFTWARECYS C:15 , PHE C:21 , ARG C:24 , TYR C:25 , TYR C:110 , TRP C:136 , GLY C:137 , HOH C:2009BINDING SITE FOR RESIDUE GOL C 801
20CC2SOFTWARETHR A:85 , TYR C:35 , LYS C:36 , GLU C:40 , LYS C:365 , MET C:366 , THR C:367 , HOH C:2107BINDING SITE FOR RESIDUE GOL C 802
21CC3SOFTWARETYR C:7 , MET C:29 , ASP C:30 , ILE C:38BINDING SITE FOR RESIDUE DMF C 900
22CC4SOFTWARETYR C:301 , ARG C:352 , LEU C:356 , GLU C:359 , MET C:366BINDING SITE FOR RESIDUE DMF C 901
23CC5SOFTWAREASP D:186 , HIS D:188 , ASP D:285 , UV4 D:700BINDING SITE FOR RESIDUE ZN D 500
24CC6SOFTWAREASP D:184 , ASP D:186 , HIS D:188 , SER D:207 , VAL D:208BINDING SITE FOR RESIDUE K D 600
25CC7SOFTWAREPHE D:197 , SER D:200 , VAL D:203 , SER D:243 , HOH D:2073BINDING SITE FOR RESIDUE K D 601
26CC8SOFTWAREASP C:50 , LYS D:20 , HIS D:141 , HIS D:142 , ASP D:186 , HIS D:188 , ASP D:285 , HIS D:292 , GLY D:339 , TYR D:341 , ZN D:500BINDING SITE FOR RESIDUE UV4 D 700
27CC9SOFTWARETYR D:11 , PRO D:46 , GLN D:48 , GLN D:116BINDING SITE FOR RESIDUE GOL D 800
28DC1SOFTWAREHIS D:189 , GLU D:194 , THR D:219 , GLY D:220 , THR D:221 , ASN D:223 , LEU D:234BINDING SITE FOR RESIDUE GOL D 801
29DC2SOFTWAREPRO C:291 , HIS C:292 , ASP D:50 , SER D:51 , SER D:53 , ARG D:54 , HOH D:2025BINDING SITE FOR RESIDUE GOL D 803
30DC3SOFTWARETYR D:301 , ARG D:352 , GLU D:359 , MET D:366 , ILE D:368BINDING SITE FOR RESIDUE DMF D 901

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FUE)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Phe A:216 -Pro A:217
2Gly A:382 -Pro A:383
3Phe B:216 -Pro B:217
4Gly B:382 -Pro B:383
5Phe C:216 -Pro C:217
6Gly C:382 -Pro C:383
7Phe D:216 -Pro D:217
8Gly D:382 -Pro D:383

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FUE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FUE)

(-) Exons   (0, 0)

(no "Exon" information available for 5FUE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:398
                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh....eeeee.....hhhhhhhh.....eeeeeeee...................hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.......................hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh...........hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fue A   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     ||180       190       200       210       220  ||   237       247       257       267       277       287       297    || 319       329       339       349       359       369       379       389   ||  407       417       427        
                                                                                                                                                                                               167|                                           223|                                                                    302|                                                                           393|                                 
                                                                                                                                                                                                177                                            231                                                                     315                                                                            402                                 


Chain B from PDB  Type:PROTEIN  Length:412
                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh.....eeeee.....hhhhhhhh.....eeeeeeee....................hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.......................hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh.................hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fue B   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHETLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        84        94       104       114       124       134       144       154       164   ||  182       192       202       212       222||     238       248       258       268       278       288       298   ||  320       330       340       350       360       370       380       390    || 404       414       424       434       444  
                                                                                                         80|                                                                                 168|                                           223|                                                                     302|                                                                             395|                                              
                                                                                                          84                                                                                  177                                            230                                                                      315                                                                              400                                              


Chain C from PDB  Type:PROTEIN  Length:412
                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhhh..hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh.....eeeee.....hhhhhhhh.....eeeeeeee....................hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee.......................hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh................hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fue C   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSTQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNLPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPSLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPHTLDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLYNLTGMGSLVPR 446
                                    11        21        31        41        51        61        71        81|       93       103       113       123       133       143       153       163    || 181       191       201       211       221 ||    237       247       257       267       277       287       297    || 319       329       339       349       359       369       379       389    || 404       414       424       434       444  
                                                                                                          81|                                                                                 168|                                           223|                                                                     302|                                                                            394|                                              
                                                                                                           84                                                                                  177                                            230                                                                      315                                                                             400                                              


Chain D from PDB  Type:PROTEIN  Length:398
                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhh......hhhhhhhhhhhhh.hhhhheee......hhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhh....eeee...................hhhhhhhhhhhh....eeeee.....hhhhhhhh.....eeeeeeee....................hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhhh..eeeee......................hhhhhhhhhhhh....eeee.....hhhhhhhhhhhhhhhhhhhhhh.............hhhhhh...........hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fue D   2 SVGIVYGDQYRQLCCSSPKFGDRYALVMDLINAYKLIPELSRVPPLQWDSPSRMYEAVTAFHSTEYVDALKKLQMLHCEEKELTADDELLMDSFSLNYDCPGFPSVFDYSLAAVQGSLAAASALICRHCEVVINWGGGWHHAKRSEASGFCYLNDIVLAIHRLVSSQTRVLYVDLDLHHGDGVEEAFWYSPRVVTFSVHHASPGFFPGTGTWNMPIFLNGAGRGRFSAFNLPLEEGINDLDWSNAIGPILDSLNIVIQPSYVVVQCGADCLATDPHRIFRLTNFYPLSGYLYAIKKILSWKVPTLILGGGGYNFPDTARLWTRVTALTIEEVKGKKMTISPEIPEHSYFSRYGPDFELDIDYFPDSIQKHHRRILEQLRNYADLNKLIYDYDQVYQLY 435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161     ||180       190       200       210       220   ||  236       246       256       266       276       286       296     ||319       329       339       349       359       369       379       389   ||  407       417       427        
                                                                                                                                                                                               167|                                            224|                                                                    302|                                                                          393|                                 
                                                                                                                                                                                                177                                             231                                                                     316                                                                           402
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FUE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FUE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FUE)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    DMF  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    K  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    UV4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly A:382 - Pro A:383   [ RasMol ]  
    Gly B:382 - Pro B:383   [ RasMol ]  
    Gly C:382 - Pro C:383   [ RasMol ]  
    Gly D:382 - Pro D:383   [ RasMol ]  
    Phe A:216 - Pro A:217   [ RasMol ]  
    Phe B:216 - Pro B:217   [ RasMol ]  
    Phe C:216 - Pro C:217   [ RasMol ]  
    Phe D:216 - Pro D:217   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format | Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5fue
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  A5H660_SCHMA | A5H660
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  A5H660_SCHMA | A5H660
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A5H660_SCHMA | A5H660: 4bz5 4bz6 4bz7 4bz8 4bz9 4cqf

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5FUE)