4AW4 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   ENGINEERED VARIANT OF LISTERIA MONOCYTOGENES INLB INTERNALIN DOMAIN WITH AN ADDITIONAL LEUCINE RICH REPEAT INSERTED

Authors :   H. H. Niemann, D. W. Heinz

Date :   31 May 12 (Deposition) - 15 Aug 12 (Release) - 03 Oct 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.93

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)

Keywords :   Protein Binding, Lrr, Protein Engineering, Receptor Binding, Protein Protein Interaction, Cell Invasion, Virulence Factor, Hgf Receptor Ligand, C-Met Ligand (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. H. Niemann, E. Gherardi, W. M. Bleymuller, D. W. Heinz
Engineered Variants Of Inlb With An Additional Leucine-Rich Repeat Discriminate Between Physiologically Relevant And Packing Contacts In Crystal Structures Of The Inlb:Met Complex.
Protein Sci. V. 21 1528 2012
PubMed-ID: 22887347 | Reference-DOI: 10.1002/PRO.2142

Molecule 1 - INTERNALIN B
	Chains	:	A, B, C
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Variant	:	CODONPLUS RIL
	Expression System Vector	:	PETM30
	Expression System Vector Type	:	PLASMID
	Fragment	:	INTERNALIN DOMAIN, RESIDUES 36-321
	Organism Scientific	:	LISTERIA MONOCYTOGENES
	Organism Taxid	:	169963
	Strain	:	EGD-E

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 33)

No.	Name	Count	Type	Full Name
1	GOL	11	Ligand/Ion	GLYCEROL
2	SO4	22	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 14)

No.	Name	Count	Type	Full Name
1	GOL	5	Ligand/Ion	GLYCEROL
2	SO4	9	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 11)

No.	Name	Count	Type	Full Name
1	GOL	4	Ligand/Ion	GLYCEROL
2	SO4	7	Ligand/Ion	SULFATE ION

Biological Unit 3 (2, 8)

No.	Name	Count	Type	Full Name
1	GOL	2	Ligand/Ion	GLYCEROL
2	SO4	6	Ligand/Ion	SULFATE ION

Asymmetric Unit (33, 33)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN B:104 , SER B:106 , HOH B:2056 , ASN C:104 , SER C:106 , ASN C:128	BINDING SITE FOR RESIDUE GOL B1343
02	AC2	SOFTWARE	SER A:287 , LEU A:288 , LYS A:302	BINDING SITE FOR RESIDUE SO4 A1343
03	AC3	SOFTWARE	ASP A:222 , ARG A:246	BINDING SITE FOR RESIDUE SO4 A1344
04	AC4	SOFTWARE	HIS A:241 , CYS A:264 , LEU A:265	BINDING SITE FOR RESIDUE SO4 A1345
05	AC5	SOFTWARE	SER A:295 , ASP A:296	BINDING SITE FOR RESIDUE SO4 A1346
06	AC6	SOFTWARE	VAL A:183 , HIS A:184 , PRO A:186 , ARG A:206	BINDING SITE FOR RESIDUE SO4 A1347
07	AC7	SOFTWARE	VAL B:183 , PRO B:186 , ARG B:206	BINDING SITE FOR RESIDUE SO4 B1344
08	AC8	SOFTWARE	GLU C:151 , HIS C:173 , HOH C:2060	BINDING SITE FOR RESIDUE SO4 C1343
09	AC9	SOFTWARE	GLU B:151 , HIS B:173 , HOH B:2080 , HOH B:2089	BINDING SITE FOR RESIDUE SO4 B1345
10	BC1	SOFTWARE	GLU A:151 , HIS A:173 , HOH A:2069	BINDING SITE FOR RESIDUE SO4 A1348
11	BC2	SOFTWARE	ASN A:104 , SER A:106 , PHE A:126 , ASN A:128	BINDING SITE FOR RESIDUE GOL A1349
12	BC3	SOFTWARE	LYS A:239 , SER A:261 , HIS A:334 , HOH A:2112 , HOH A:2114 , THR C:71	BINDING SITE FOR RESIDUE GOL A1350
13	BC4	SOFTWARE	THR A:71 , ASN A:73 , HOH A:2129 , SER C:261 , HIS C:334	BINDING SITE FOR RESIDUE GOL A1351
14	BC5	SOFTWARE	GLN C:219 , HIS C:241 , GLU C:263 , HOH C:2085	BINDING SITE FOR RESIDUE GOL C1344
15	BC6	SOFTWARE	GLN C:272 , SER C:273 , ASN C:274	BINDING SITE FOR RESIDUE GOL C1345
16	BC7	SOFTWARE	THR B:202 , VAL B:203 , SER B:205 , ARG B:206 , HOH B:2099 , HOH B:2188 , ASP C:285	BINDING SITE FOR RESIDUE GOL B1346
17	BC8	SOFTWARE	HIS A:241 , GLU A:263 , HOH A:2090	BINDING SITE FOR RESIDUE GOL A1352
18	BC9	SOFTWARE	HIS B:241 , GLU B:263	BINDING SITE FOR RESIDUE GOL B1347
19	CC1	SOFTWARE	THR B:71 , ASN B:73 , SER B:261 , HIS B:334 , HOH B:2147 , HOH B:2149	BINDING SITE FOR RESIDUE GOL B1348
20	CC2	SOFTWARE	ASN A:274 , GLN B:272 , SER B:273 , ASN B:274	BINDING SITE FOR RESIDUE GOL A1353
21	CC3	SOFTWARE	PRO B:323 , ARG B:332 , HOH B:2179	BINDING SITE FOR RESIDUE SO4 B1349
22	CC4	SOFTWARE	TYR C:321 , ARG C:332 , HOH C:2140 , HOH C:2141	BINDING SITE FOR RESIDUE SO4 C1346
23	CC5	SOFTWARE	HOH B:2113 , ARG C:246	BINDING SITE FOR RESIDUE SO4 C1347
24	CC6	SOFTWARE	PRO A:323 , ARG A:332 , HOH A:2121	BINDING SITE FOR RESIDUE SO4 A1354
25	CC7	SOFTWARE	SER C:287 , LEU C:288 , LYS C:302	BINDING SITE FOR RESIDUE SO4 C1348
26	CC8	SOFTWARE	SER B:287 , LEU B:288 , LYS B:302 , HOH B:2164	BINDING SITE FOR RESIDUE SO4 B1350
27	CC9	SOFTWARE	VAL C:183 , HIS C:184 , PRO C:186 , ARG C:206	BINDING SITE FOR RESIDUE SO4 C1349
28	DC1	SOFTWARE	LYS B:131 , HIS C:173 , ASN C:195 , ASP C:217	BINDING SITE FOR RESIDUE SO4 B1351
29	DC2	SOFTWARE	HIS B:241 , LEU B:265 , HOH B:2109	BINDING SITE FOR RESIDUE SO4 B1352
30	DC3	SOFTWARE	LYS A:131 , HIS A:173	BINDING SITE FOR RESIDUE SO4 A1355
31	DC4	SOFTWARE	PRO A:291 , GLU A:292 , ILE A:293 , ILE A:294	BINDING SITE FOR RESIDUE SO4 A1356
32	DC5	SOFTWARE	THR B:208 , LYS C:252	BINDING SITE FOR RESIDUE SO4 C1350
33	DC6	SOFTWARE	SER B:295 , ASP B:296	BINDING SITE FOR RESIDUE SO4 B1353

(no "SS Bond" information available for 4AW4)

Asymmetric Unit

No.	Residues
1	Lys A:302	-	Pro A:303
2	Lys B:302	-	Pro B:303
3	Lys C:302	-	Pro C:303

(no "SAP(SNP)/Variant" information available for 4AW4)

Asymmetric Unit (1, 18)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LRR	PS51450	Leucine-rich repeat profile.	INLB_LISMO	99-120 121-142 143-164 165-186 187-208 209-230	18	A:121-142 B:121-142 C:121-142 A:143-164 B:143-164 C:143-164 A:165-186 B:165-186 C:165-186 A:187-208 B:187-208 C:187-208 A:209-230 B:209-230 C:209-230 A:231-252 B:231-252 C:231-252

Biological Unit 1 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LRR	PS51450	Leucine-rich repeat profile.	INLB_LISMO	99-120 121-142 143-164 165-186 187-208 209-230	6	A:121-142 - - A:143-164 - - A:165-186 - - A:187-208 - - A:209-230 - - A:231-252 - -

Biological Unit 2 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LRR	PS51450	Leucine-rich repeat profile.	INLB_LISMO	99-120 121-142 143-164 165-186 187-208 209-230	6	- B:121-142 - - B:143-164 - - B:165-186 - - B:187-208 - - B:209-230 - - B:231-252 -

Biological Unit 3 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LRR	PS51450	Leucine-rich repeat profile.	INLB_LISMO	99-120 121-142 143-164 165-186 187-208 209-230	6	- - C:121-142 - - C:143-164 - - C:165-186 - - C:187-208 - - C:209-230 - - C:231-252

(no "Exon" information available for 4AW4)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:301
 aligned with INLB_LISMO | P25147 from UniProtKB/Swiss-Prot  Length:630

    Alignment length:307
                                                                                         98                     99                                                                                                                                                                                                                             
                                    45        55        65        75        85        95  |      -         -     | 103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       
           INLB_LISMO    36 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLP----------------------NVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLK 320
               SCOP domains d4aw4a1 A:36-262 automated matches                                                                                                                                                                                                 d4aw4a2 A:263-342 automated matches                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eehhhhh.hhhhhhhhhhhh.......eehhhhhhh..eee..........hhhhh....eee........hhhhh......eee........hhhhhhh....eee........hhhhh......eee........hhhhhhh....eee........hhhhhhh....eee........hhhhh......eee........hhhhh......eee...eeee...ee....eeee..............ee....eee..eeee------.eeeeeeeeeeee..eeeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------LRR  PDB: A:121-142   LRR  PDB: A:143-164   LRR  PDB: A:165-186   LRR  PDB: A:187-208   LRR  PDB: A:209-230   LRR  PDB: A:231-252   ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aw4 A  36 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNLTSLNLSNNQITDISPIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKW------NEVSFIFYQPVTIGKAKARFHGRVTQPLK 342
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305 |     315       325       335       
                                                                                                                                                                                                                                                                                                         307    314

Chain B from PDB  Type:PROTEIN  Length:307
 aligned with INLB_LISMO | P25147 from UniProtKB/Swiss-Prot  Length:630

    Alignment length:307
                                                                                         98                     99                                                                                                                                                                                                                             
                                    45        55        65        75        85        95  |      -         -     | 103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       
           INLB_LISMO    36 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLP----------------------NVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLK 320
               SCOP domains d4aw4b1 B:36-262 automated matches                                                                                                                                                                                                 d4aw4b2 B:263-342 automated matches                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eehhhhh.hhhhhhhhhhhh.......eehhhhhhh..eee..........hhhhh....eee........hhhhh......eee........hhhhhhh....eee........hhhhh......eee........hhhhhhh....eee........hhhhhhh....eee........hhhhh......eee........hhhhh......eee...eeee...ee...eeeee..............ee.hhheee..eeeee......eeeeeeeeeeee..eeeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------LRR  PDB: B:121-142   LRR  PDB: B:143-164   LRR  PDB: B:165-186   LRR  PDB: B:187-208   LRR  PDB: B:209-230   LRR  PDB: B:231-252   ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aw4 B  36 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNLTSLNLSNNQITDISPIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLK 342
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335

Chain C from PDB  Type:PROTEIN  Length:307
 aligned with INLB_LISMO | P25147 from UniProtKB/Swiss-Prot  Length:630

    Alignment length:307
                                                                                         98                     99                                                                                                                                                                                                                             
                                    45        55        65        75        85        95  |      -         -     | 103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       
           INLB_LISMO    36 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLP----------------------NVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLK 320
               SCOP domains d4aw4c1 C:36-262 automated matches                                                                                                                                                                                                 -------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eehhhhh.hhhhhhhhhhhh.......eehhhhhhh..eee..........hhhhh....eee........hhhhh......eee........hhhhhhh....eee........hhhhh......eee........hhhhhhh....eee........hhhhhhh....eee........hhhhh......eee........hhhhh......eee...eeee...ee...eeeee..............ee....eee..eeeee......eeeeeeeeeeee..eeeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------LRR  PDB: C:121-142   LRR  PDB: C:143-164   LRR  PDB: C:165-186   LRR  PDB: C:187-208   LRR  PDB: C:209-230   LRR  PDB: C:231-252   ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aw4 C  36 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNLTSLNLSNNQITDISPIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLK 342
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Immunoglobulin-like beta-sandwich (7299)

Superfamily: E set domains (509)

Family: automated matches (93)

Protein domain: automated matches (93)

Listeria monocytogenes [TaxId: 169963] (7)

1a	d4aw4a2	A:263-342
1b	d4aw4b2	B:263-342

Class: Alpha and beta proteins (a/b) (23833)

Fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) (112)

Superfamily: L domain-like (93)

Family: automated matches (23)

Protein domain: automated matches (23)

Listeria monocytogenes [TaxId: 169963] (2)

2a	d4aw4a1	A:36-262
2b	d4aw4b1	B:36-262
2c	d4aw4c1	C:36-262

(no "CATH Domain" information available for 4AW4)

(no "Pfam Domain" information available for 4AW4)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (INLB_LISMO | P25147)

molecular function
	GO:0005515		protein binding		Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]
		CC4	[ RasMol ]	+environment [ RasMol ]
		CC5	[ RasMol ]	+environment [ RasMol ]
		CC6	[ RasMol ]	+environment [ RasMol ]
		CC7	[ RasMol ]	+environment [ RasMol ]
		CC8	[ RasMol ]	+environment [ RasMol ]
		CC9	[ RasMol ]	+environment [ RasMol ]
		DC1	[ RasMol ]	+environment [ RasMol ]
		DC2	[ RasMol ]	+environment [ RasMol ]
		DC3	[ RasMol ]	+environment [ RasMol ]
		DC4	[ RasMol ]	+environment [ RasMol ]
		DC5	[ RasMol ]	+environment [ RasMol ]
		DC6	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Lys A:302 - Pro A:303	[ RasMol ]
		Lys B:302 - Pro B:303	[ RasMol ]
		Lys C:302 - Pro C:303	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	4aw4
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	INLB_LISMO \| P25147
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	INLB_LISMO \| P25147
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

1d0b	INTERNALIN B LEUCINE RICH REPEAT DOMAIN
1h6t	INTERNALIN B: CRYSTAL STRUCTURE OF FUSED N-TERMINAL DOMAINS.
1m9s	CRYSTAL STRUCTURE OF INTERNALIN B (INLB), A LISTERIAMONOCYTOGENES VIRULENCE PROTEIN CONTAINING SH3- LIKEDOMAINS.
1otm	CALCIUM-BINDING MUTANT OF THE INTERNALIN B LRR DOMAIN
1otn	CALCIUM-BINDING MUTANT OF THE INTERNALIN B LRR DOMAIN
1oto	CALCIUM-BINDING MUTANT OF THE INTERNALIN B LRR DOMAIN
2uzx	STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: CRYSTAL FORM I
2uzy	STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: LOW RESOLUTION, CRYSTAL FORM II
2wqu	INTERNALIN DOMAIN OF LISTERIA MONOCYTOGENES INLB: TRICLINIC CRYSTAL FORM
2wqv	INTERNALIN DOMAIN OF LISTERIA MONOCYTOGENES INLB: RHOMBOHEDRAL CRYSTAL FORM
2wqw	DOUBLE-DISULFIDE CROSS-LINKED CRYSTAL DIMER OF THE LISTERIA MONOCYTOGENES INLB INTERNALIN DOMAIN
2wqx	INLB321_4R: S199R, D200R, G206R, A227R, C242A MUTANT OF THE LISTERIA MONOCYTOGENES INLB INTERNALIN DOMAIN
2y5p	B-REPEAT OF LISTERIA MONOCYTOGENES INLB (INTERNALIN B)
2y5q	LISTERIA MONOCYTOGENES INLB (INTERNALIN B) RESIDUES 36- 392

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 33)

Sites (33, 33)

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 18)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 5)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (1, 1)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File