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(-) Description

Title :  BACKBONE MODIFICATIONS IN THE PROTEIN GB1 HELIX: BETA-3-ALA24, BETA-3-LYS28, BETA-3-GLN32, BETA-3-ASP36
 
Authors :  Z. E. Reinert, W. S. Horne
Date :  14 Feb 14  (Deposition) - 16 Jul 14  (Release) - 25 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Unnatural Backbone, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Z. E. Reinert, W. S. Horne
Folding Thermodynamics Of Protein-Like Oligomers With Heterogeneous Backbones.
Chem Sci V. 5 3325 2014
PubMed-ID: 25071931  |  Reference-DOI: 10.1039/C4SC01094A

(-) Compounds

Molecule 1
    Chains: A
    Engineered: YES
    Organism Scientific: STREPTOCOCCUS SP.
    Organism Taxid: 1306
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 6)

Asymmetric/Biological Unit (6, 6)
No.NameCountTypeFull Name
1B3A1Mod. Amino Acid(3S)-3-AMINOBUTANOIC ACID
2B3D1Mod. Amino Acid3-AMINOPENTANEDIOIC ACID
3B3K1Mod. Amino Acid(3S)-3,7-DIAMINOHEPTANOIC ACID
4B3Q1Mod. Amino Acid(3S)-3,6-DIAMINO-6-OXOHEXANOIC ACID
5IPA1Ligand/IonISOPROPYL ALCOHOL
6NH21Mod. Amino AcidAMINO GROUP

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:19 , ALA A:20 , VAL A:21 , GLU A:27 , TRP A:43binding site for residue IPA A 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OZA)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OZA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OZA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OZA)

(-) Exons   (0, 0)

(no "Exon" information available for 4OZA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:57
                                                                                        
               SCOP domains --------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....eeeeeee..hhhhhhhhhhhhhhhhh...eeeeehhh.eeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------- Transcript
                  4oza A  1 DTYKLILNGKTLKGETTTEAVDAxTAExVFKxYANxNGVDGEWTYDDATKTFTVTEx 57
                                    10        20   |   |30 |   |  40        50      |
                                                  24-B3A   |   |                   57-NH2
                                                      28-B3K   |                     
                                                          32-B3Q                     
                                                              36-B3D
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OZA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OZA)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OZA)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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  SPG2_STRSG | P19909
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SPG2_STRSG | P19909: 1fcc 1fcl 1fd6 1gb4 1gjs 1gjt 1ibx 1p7e 1p7f 1qkz 1uwx 1zxh 2gi9 2i2y 2i38 2igg 2jsv 2ju6 2khu 2khw 2kn4 2kq4 2kwd 2lum 2n9k 2n9l 2oed 2on8 2onq 2plp 2qmt 3fil 3ui3 3v3x 4ozb 4ozc 4wh4 5bmg 5bmh 5bmi 5hfy 5hg2 5hi1

(-) Related Entries Specified in the PDB File

4ozb 4ozc