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Asym./Biol. Unit (Jmol Viewer)

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Title :   CRYSTAL STRUCTURE OF BRI1 SUD1 (GLY643GLU) BOUND TO BRASSINOLIDE

Authors :   J. Santiago, C. Henzler, M. Hothorn

Date :   22 Jul 13 (Deposition) - 04 Sep 13 (Release) - 04 Sep 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym./Biol. Unit : A

Keywords :   Lrr-Domain, Membrane Receptor, Brassinosteroid Binding, N- Glycosylation, Protein Binding, Steroid Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Santiago, C. Henzler, M. Hothorn
Molecular Mechanism For Plant Steroid Receptor Activation B Somatic Embryogenesis Co-Receptor Kinases.
Science V. 341 889 2013
PubMed-ID: 23929946 | Reference-DOI: 10.1126/SCIENCE.1242468

Molecule 1 - PROTEIN BRASSINOSTEROID INSENSITIVE 1
	Chains	:	A
	Engineered	:	YES
	Expression System	:	TRICHOPLUSIA NI
	Expression System Common	:	CABBAGE LOOPER
	Expression System Plasmid	:	PBAC-6 MOD.
	Expression System Strain	:	TNAO38
	Expression System Taxid	:	7111
	Expression System Vector Type	:	BACULOVIRUS/PLASMID
	Fragment	:	RECEPTOR ECTODOMAIN/LRR-DOMAIN (UNP RESIDUES 29-788)
	Gene	:	AT4G39400, BRI1, F23K16.30
	Mutation	:	YES
	Organism Common	:	MOUSE-EAR CRESS
	Organism Scientific	:	ARABIDOPSIS THALIANA
	Organism Taxid	:	3702
	Strain	:	COL 0
	Synonym	:	ATBRI1, BRASSINOSTEROID LRR RECEPTOR KINASE

		1
Asymmetric/Biological Unit	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (4, 17)

No.	Name	Count	Type	Full Name
1	BLD	1	Ligand/Ion	BRASSINOLIDE
2	BMA	3	Ligand/Ion	BETA-D-MANNOSE
3	MAN	3	Ligand/Ion	ALPHA-D-MANNOSE
4	NAG	10	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TYR A:597 , TYR A:599 , LYS A:601 , TYR A:642 , THR A:646 , SER A:647 , MET A:657 , ASN A:705 , THR A:729 , HOH A:906 , HOH A:949	BINDING SITE FOR RESIDUE BLD A 817
2	AC2	SOFTWARE	ASN A:112	BINDING SITE FOR MONO-SACCHARIDE NAG A 801 BOUND TO ASN A 112
3	AC3	SOFTWARE	SER A:130 , PHE A:152 , ASN A:154 , SER A:156 , VAL A:177 , ASP A:179 , HIS A:204 , HOH A:912	BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 154 RESIDUES 802 TO 805
4	AC4	SOFTWARE	ASN A:233	BINDING SITE FOR MONO-SACCHARIDE NAG A 806 BOUND TO ASN A 233
5	AC5	SOFTWARE	SER A:253 , ASN A:275 , SER A:277 , SER A:278 , TYR A:295 , HOH A:946	BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 275 RESIDUES 807 TO 810
6	AC6	SOFTWARE	ASN A:351 , GLU A:376	BINDING SITE FOR MONO-SACCHARIDE NAG A 811 BOUND TO ASN A 351
7	AC7	SOFTWARE	ASN A:545 , HIS A:610 , SER A:630 , THR A:631 , ARG A:632 , ASN A:633 , PRO A:634	BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 545 RESIDUES 812 TO 815
8	AC8	SOFTWARE	ASN A:573 , GLY A:574	BINDING SITE FOR MONO-SACCHARIDE NAG A 816 BOUND TO ASN A 573

Asymmetric/Biological Unit

No.	Residues
1	A:62	-	A:69
2	A:120	-	A:147
3	A:199	-	A:221
4	A:244	-	A:268
5	A:315	-	A:339
6	A:411	-	A:439
7	A:609	-	A:635
8	A:763	-	A:770

Asymmetric/Biological Unit

No.	Residues
1	Tyr A:765	-	Pro A:766

(no "SAP(SNP)/Variant" information available for 4LSA)

(no "PROSITE Motif" information available for 4LSA)

(no "Exon" information available for 4LSA)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:743
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh..............hhhhh..eee....eeeee.......eehhhhhhhh.......eee.....eee............eee....eeeee.hhhhhhhhh....eee....eee...............eee......eeehhhhhhh........eee....eee............eee....................eee........hhhhhhh......eee......ee...........eee....ee....hhhhhhhh....eee......ee..hhhhhhh....eee....eeee..hhhhhh......eee....eeeee.hhhhhhhhhh..eee....eeeee..............eee....eeeee.hhhhhhh....eee....eee...hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee......ee..hhhhhhh....eee....eeeee.hhhhhhh....eee....eeeee.hhhhhh.............eeeeee...........eeeee....hhhhhhhhhhh........eeeee............eee....eee...hhhhhhh....eee..........hhhhhhh....eee......ee..hhhhhhh....eee....eeeee..........hhhhhh...eee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lsa A  29 SQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYEGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCD 771
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4LSA)

(no "CATH Domain" information available for 4LSA)

(no "Pfam Domain" information available for 4LSA)

Asymmetric/Biological Unit(hide GO term definitions)

Asymmetric/Biological Unit
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	Cis Peptide Bonds
		Tyr A:765 - Pro A:766	[ RasMol ]

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	4lsa
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	BRI1_ARATH \| O22476	:	3rgx 3rgz 3riz 3rj0 4lsx 4m7e 4oh4 4q5j 5lpb 5lpv 5lpw 5lpy 5lpz

3riz	ISOLATED STEROID RECEPTOR LIGAND BINDING DOMAIN IN ITS FREE FORM
3rj0	ISOLATED STEROID RECEPTOR LIGAND BINDING DOMAIN BOUND TO BRASSINOLIDE
4lsc	ISOLATED SERK1 CO-RECEPTOR ECTODOMAIN AT HIGH RESOLUTION
4lsx	STEROID RECEPTOR LIGAND BINDING DOMAIN BOUND TO SERK1 CO- RECEPTOR ECTODOMAIN

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 17)

Sites (8, 8)

SS Bonds (8, 8)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (0, 0)

CATH Domains (0, 0)

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Gene Ontology (32, 32)

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