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(-) Description

Title :  CRYSTAL STRUCTURE OF BRI1 IN COMPLEX WITH BKI1
 
Authors :  J. Wang, J. Wang, J. W. Wu, Z. X. Wang
Date :  17 Jan 14  (Deposition) - 29 Oct 14  (Release) - 19 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.25
Chains :  Asym. Unit :  A,B,E,F
Biol. Unit 1:  A,E  (1x)
Biol. Unit 2:  B,F  (1x)
Keywords :  Kinase Domain, Transferase, Atp Binding, Phosphorylation, Membrane, Transferase-Signaling Protein Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Wang, J. Jiang, J. Wang, L. Chen, S. L. Fan, J. W. Wu, X. Wang, Z. X. Wang
Structural Insights Into The Negative Regulation Of Bri1 Signaling By Bri1-Interacting Protein Bki1.
Cell Res. V. 24 1328 2014
PubMed-ID: 25331450  |  Reference-DOI: 10.1038/CR.2014.132

(-) Compounds

Molecule 1 - PROTEIN BRASSINOSTEROID INSENSITIVE 1
    Chains: A, B
    EC Number: 2.7.10.1, 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-DUET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: KINASE DOMAIN, UNP RESIDUES 863-1172
    Gene: AT4G39400, BRI1, F23K16.30
    Organism Common: MOUSE-EAR CRESS,THALE-CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: ATBRI1, BRASSINOSTEROID LRR RECEPTOR KINASE
 
Molecule 2 - BRI1 KINASE INHIBITOR 1
    Chains: F, E
    Engineered: YES
    Fragment: C-TERMINAL PEPTIDE, UNP RESIDUES 306-325
    Organism Common: MOUSE-EAR CRESS,THALE-CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Other Details: THIS SEQUENCE OCCURS NATURALLY IN ARABIDOPSIS THALIANA.
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABEF
Biological Unit 1 (1x): A E 
Biological Unit 2 (1x):  B F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 10)

Asymmetric Unit (3, 10)
No.NameCountTypeFull Name
1ANP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2SEP6Mod. Amino AcidPHOSPHOSERINE
3TPO2Mod. Amino AcidPHOSPHOTHREONINE
Biological Unit 1 (3, 5)
No.NameCountTypeFull Name
1ANP1Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2SEP3Mod. Amino AcidPHOSPHOSERINE
3TPO1Mod. Amino AcidPHOSPHOTHREONINE
Biological Unit 2 (3, 5)
No.NameCountTypeFull Name
1ANP1Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2SEP3Mod. Amino AcidPHOSPHOSERINE
3TPO1Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:893 , ALA A:909 , LYS A:911 , TYR A:956 , GLU A:957 , PHE A:958 , MET A:959 , SER A:963 , ASP A:966 , LYS A:1011 , SER A:1013 , ASN A:1014 , LEU A:1016 , ASP A:1027 , HOH A:1420BINDING SITE FOR RESIDUE ANP A 1201
2AC2SOFTWAREILE B:889 , SER B:891 , GLY B:892 , GLY B:893 , VAL B:897 , ALA B:909 , LYS B:911 , TYR B:956 , GLU B:957 , PHE B:958 , MET B:959 , SER B:963 , ASP B:966 , LYS B:1011 , SER B:1013 , ASN B:1014 , LEU B:1016 , ASP B:1027 , HOH B:1322 , HOH B:1343 , HOH B:1383BINDING SITE FOR RESIDUE ANP B 1201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OH4)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ser A:1002 -Pro A:1003
2Ser B:1002 -Pro B:1003

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OH4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OH4)

(-) Exons   (0, 0)

(no "Exon" information available for 4OH4)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:303
                                                                                                                                                                                                                                                                                                                                                
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh...ee.hhhhhhhhh...hhh.eee....eeeeeee.....eeeeeee.......hhhhhhhhhhhhhh.......eeeeeee..eeeeeee.....hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...eee....hhh.eee.....eee......eee......ee...........hhhhhh..eehhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhh.hhhhhhhh..hhhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4oh4 A  852 DLEVLFQGPHMAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDtHLsVsTLAGTPGYVPPEYYQsFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNNLVGWVKQHAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQA 1160
                                   861       871       881       891       901       911       921       931       941       951       961       977       987       997      1007      1017      1027      1037 |  | 1047      1057  |   1067      1077      1087      1097      1107      1117      1127      1137      1147      1157   
                                                                                                                                                970|                                                          1039-TPO|            1060-SEP                                                                                                
                                                                                                                                                 977                                                             1042-SEP                                                                                                                  
                                                                                                                                                                                                                   1044-SEP                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:293
                                                                                                                                                                                                                                                                                                                                      
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.hhhhhhhhh.......eeee...eeeeeee.....eeeeeee...hhhhhhhhhhhhh.......eeeee......eeeee.....hhhhhhh...hhhhhhhhhhhhhhhhhhhhhh...eee....hhh.eee.....eee......eee......ee...........hhhhhhh.eehhhhhhhhhhhhhhhhhhh............hhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4oh4 B  852 DLEVLFQGPHPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDtHLsVsTLAGTPGYVPPEYYQsFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNNLVGWVKQHAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQA 1160
                                   861|      876       886       896       906       921       931       941       951       961       977       987       997      1007      1017      1027      1037 |  | 1047      1057  |   1067      1077      1087      1097      1107      1117      1127      1137      1147      1157   
                                   861|                                             915|                                             969|                                                           1039-TPO|            1060-SEP                                                                                                
                                    867                                              921                                              976                                                              1042-SEP                                                                                                                  
                                                                                                                                                                                                         1044-SEP                                                                                                                


Chain E from PDB  Type:PROTEIN  Length:16
                                                 
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
                 Transcript ---------------- Transcript
                4oh4 E  307 TMEELQAAIQAAIAHC  322
                                   316      


Chain F from PDB  Type:PROTEIN  Length:16
                                                 
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
                 Transcript ---------------- Transcript
                4oh4 F  307 TMEELQAAIQAAIAHC  322
                                   316
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OH4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OH4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OH4)

(-) Gene Ontology  (38, 43)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

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        BKI1_ARATH | Q9FMZ0: 4q5j
        BRI1_ARATH | O22476: 3rgx 3rgz 3riz 3rj0 4lsa 4lsx 4m7e 4q5j 5lpb 5lpv 5lpw 5lpy 5lpz

(-) Related Entries Specified in the PDB File

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