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(-) Description

Title :  CRYSTAL STRUCTURE OF THE BRI1 KINASE DOMAIN (865-1196) IN COMPLEX WITH ADP FROM ARABIDOPSIS THALIANA
 
Authors :  D. Bojar, J. Martinez, M. Hothorn
Date :  15 Aug 16  (Deposition) - 24 Aug 16  (Release) - 31 Aug 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.48
Chains :  Asym./Biol. Unit :  A
Keywords :  Brassinosteroid Receptor, Kinase Domain, Dual-Specificify Kinase, Membrane Receptor Kinase, Plasma Membrane, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Bojar, J. Martinez, J. Santiago, V. Rybin, R. Bayliss, M. Hothorn
Crystal Structures Of The Phosphorylated Bri1 Kinase Domain And Implications For Brassinosteroid Signal Initiation.
Plant J. V. 78 31 2014
PubMed-ID: 24461462  |  Reference-DOI: 10.1111/TPJ.12445

(-) Compounds

Molecule 1 - PROTEIN BRASSINOSTEROID INSENSITIVE 1
    Chains: A
    EC Number: 2.7.10.1, 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PMH-HT
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 865-1196
    Gene: BRI1, AT4G39400, F23K16.30
    Mutation: YES
    Organism Common: MOUSE-EAR CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: ATBRI1,BRASSINOSTEROID LRR RECEPTOR KINASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2SEP2Mod. Amino AcidPHOSPHOSERINE
3TPO1Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:889 , PHE A:894 , VAL A:897 , ALA A:909 , TYR A:956 , GLU A:957 , PHE A:958 , MET A:959 , SER A:963 , ASP A:966 , SER A:1013 , ASN A:1014 , LEU A:1016 , ASP A:1027 , HOH A:1301 , HOH A:1307 , HOH A:1314binding site for residue ADP A 1200

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5LPZ)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ser A:1002 -Pro A:1003

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5LPZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5LPZ)

(-) Exons   (0, 0)

(no "Exon" information available for 5LPZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:286
                                                                                                                                                                                                                                                                                                                               
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee.hhhhhhhhh.......eee....eeeeeee.....eeeeeee....hhhhhhhhhhhhh...........eeeeeee..eeeeeee....eehhhhhh.........hhhhhhhhhhhhhhhhhhhhh....eee....hhh.eee.....eee......eee......ee...........hhhhhh..eehhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.hhhhh.hhhhhhhh..hhhhhhhhhhhhhhh........hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5lpz A  866 KPLRKLAFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDtHLsVsTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTNLVGWVKQHAKLRISDVFDPELMKEDPALEELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQA 1160
                                   875       885       895       905       915       925       935       945       955       965       975       985       995      1005      1015      1025      1035   |  1045      1055      1065      1075      1085||    1103      1113      1123||    1134      1144      1154      
                                                                                                                                                                                                      1039-TPO|                                      1086|                         1124|                                  
                                                                                                                                                                                                         1042-SEP                                     1095                          1126                                  
                                                                                                                                                                                                           1044-SEP
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5LPZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5LPZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5LPZ)

(-) Gene Ontology  (32, 32)

Asymmetric/Biological Unit(hide GO term definitions)

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    Ser A:1002 - Pro A:1003   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BRI1_ARATH | O22476: 3rgx 3rgz 3riz 3rj0 4lsa 4lsx 4m7e 4oh4 4q5j 5lpb 5lpv 5lpw 5lpy

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5LPZ)