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(-) Description

Title :  CRYSTAL STRUCTURE OF AKR1B10 COMPLEXED WITH NADP+ AND ZOPOLRESTAT
 
Authors :  L. Zhang, X. Zheng, H. . Zhang, Y. Zhao, K. Chen, J. Zhai, X. Hu
Date :  06 Mar 13  (Deposition) - 23 Oct 13  (Release) - 27 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  X
Keywords :  Tim Barrel, Oxidoreductase, Oxidoreductase-Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Zhang, H. Zhang, Y. Zhao, Z. Li, S. Chen, J. Zhai, Y. Chen, W. Xie, Z. Wang, Q. Li, X. Zheng, X. Hu
Inhibitor Selectivity Between Aldo-Keto Reductase Superfamily Members Akr1B10 And Akr1B1: Role Of Trp112 (Trp111).
Febs Lett. V. 587 3681 2013
PubMed-ID: 24100137  |  Reference-DOI: 10.1016/J.FEBSLET.2013.09.031

(-) Compounds

Molecule 1 - ALDO-KETO REDUCTASE FAMILY 1 MEMBER B10
    Chains: X
    EC Number: 1.1.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: AKR1B10, AKR1B11
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ARL-1, ALDOSE REDUCTASE-LIKE, ALDOSE REDUCTASE-RELATED PROTEIN, ARP, HARP, SMALL INTESTINE REDUCTASE, SI REDUCTASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : X

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric/Biological Unit (3, 3)
No.NameCountTypeFull Name
1NA1Ligand/IonSODIUM ION
2NAP1Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
3ZST1Ligand/Ion3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2-BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY X:19 , THR X:20 , TRP X:21 , LYS X:22 , ASP X:44 , TYR X:49 , LYS X:78 , HIS X:111 , TRP X:112 , SER X:160 , ASN X:161 , GLN X:184 , TYR X:210 , SER X:211 , PRO X:212 , LEU X:213 , GLY X:214 , SER X:215 , PRO X:216 , ASP X:217 , LEU X:229 , ALA X:246 , ILE X:261 , PRO X:262 , LYS X:263 , SER X:264 , VAL X:265 , THR X:266 , ARG X:269 , GLU X:272 , ASN X:273 , ZST X:402 , HOH X:529 , HOH X:532 , HOH X:543 , HOH X:562 , HOH X:605 , HOH X:623BINDING SITE FOR RESIDUE NAP X 401
2AC2SOFTWARETRP X:21 , TYR X:49 , TRP X:80 , HIS X:111 , TRP X:112 , GLN X:114 , PHE X:116 , PHE X:123 , TRP X:220 , CYS X:299 , VAL X:301 , LEU X:302 , SER X:304 , TYR X:310 , PRO X:311 , NAP X:401 , HOH X:607BINDING SITE FOR RESIDUE ZST X 402
3AC3SOFTWAREHIS X:188 , PRO X:189 , PRO X:212 , LEU X:249 , HIS X:253BINDING SITE FOR RESIDUE NA X 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JII)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JII)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JII)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JII)

(-) Exons   (0, 0)

(no "Exon" information available for 4JII)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain X from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4jiix_ X: automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.....eee...ee......hhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhh....eeeeee..........................hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh.......eeeeeee......hhhhhhhhhhh..eeeee....................hhhhhhhhhhh..hhhhhhhhhhhh...ee.....hhhhhhhh........hhhhhhhhhh..................hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4jii X  -1 SHMATFVELSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRACNVLQSSHLEDYPFDAEY 316
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JII)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JII)

(-) Gene Ontology  (18, 18)

Asymmetric/Biological Unit(hide GO term definitions)

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  AK1BA_HUMAN | O60218
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AK1BA_HUMAN | O60218: 1zua 4ga8 4gab 4gq0 4gqg 4i5x 4icc 4jih 4wev 4xzl 4xzm 4xzn 5lik 5liu 5liw 5lix 5liy 5m2f

(-) Related Entries Specified in the PDB File

4gq0 CRYSTAL STRUCTURE OF AKR1B10 COMPLEXED WITH NADP+ AND CAFFEIC ACID PHENETHYL ESTER
4gqg CRYSTAL STRUCTURE OF AKR1B10 HOLOENZYME
4i5x CRYSTAL STRUCTURE OF AKR1B10 COMPLEXED WITH NADP+ AND FLUFENAMIC ACID
4jih CRYSTAL STRUCTURE OF AKR1B10 COMPLEXED WITH NADP+ AND EPALRESTAT
4jir CRYSTAL STRUCTURE OF ALDOSE REDUCTASE (AKR1B1) COMPLEXED WITH NADP+ AND EPALRESTAT RELATED ID: SGC-AKR1B10 RELATED DB: TARGETTRACK