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(-) Description

Title :  CRYSTAL STRUCTURE OF AKR1B10 COMPLEXED WITH NADP+
 
Authors :  L. Zhang, X. Zheng, S. Chen, J. Zhai, X. Hu
Date :  23 Aug 12  (Deposition) - 28 Aug 13  (Release) - 11 Dec 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.92
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha-Beta Tim Barrel, Nadp-Dependant Oxidoreductase, Nadp+, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Zhang, H. Zhang, Y. Zhao, Z. Li, S. Chen, J. Zhai, Y. Chen, W. Xie, Z. Wang, Q. Li, X. Zheng, X. Hu
Inhibitor Selectivity Between Aldo-Keto Reductase Superfamily Members Akr1B10 And Akr1B1: Role Of Trp112 (Trp111)
Febs Lett. V. 587 3681 2013
PubMed-ID: 24100137  |  Reference-DOI: 10.1016/J.FEBSLET.2013.09.031

(-) Compounds

Molecule 1 - ALDO-KETO REDUCTASE FAMILY 1 MEMBER B10
    Chains: A
    EC Number: 1.1.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: AKR1B10
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Strain: HUMAN
    Synonym: ARL-1, ALDOSE REDUCTASE-LIKE, ALDOSE REDUCTASE-RELATED PROTEIN, ARP, HARP, SMALL INTESTINE REDUCTASE, SI REDUCTASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1NAP1Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:19 , THR A:20 , TRP A:21 , LYS A:22 , ASP A:44 , TYR A:49 , HIS A:111 , SER A:160 , ASN A:161 , GLN A:184 , TYR A:210 , SER A:211 , PRO A:212 , LEU A:213 , GLY A:214 , SER A:215 , PRO A:216 , ASP A:217 , ALA A:246 , ILE A:261 , PRO A:262 , LYS A:263 , SER A:264 , VAL A:265 , THR A:266 , ARG A:269 , GLU A:272 , ASN A:273 , HOH A:537 , HOH A:560 , HOH A:568 , HOH A:581 , HOH A:582 , HOH A:624 , HOH A:764BINDING SITE FOR RESIDUE NAP A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4GQG)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4GQG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4GQG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4GQG)

(-) Exons   (0, 0)

(no "Exon" information available for 4GQG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4gqga_ A: Aldose reductase (aldehyde reductase)                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee.....eee..eee.......hhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhh....eeeeee..........................hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh.........eeeee......hhhhhhhhhhh..eeeee................hhhhhhhhhhhhhhh..hhhhhhhhhhhh...ee.....hhhhhhhhhh......hhhhhhhhhh..................hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4gqg A  -1 SHMATFVELSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRACNVLQSSHLEDYPFDAEY 316
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4GQG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4GQG)

(-) Gene Ontology  (18, 18)

Asymmetric/Biological Unit(hide GO term definitions)

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  4gqg
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  AK1BA_HUMAN | O60218
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  1.1.1.-
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AK1BA_HUMAN | O60218: 1zua 4ga8 4gab 4gq0 4i5x 4icc 4jih 4jii 4wev 4xzl 4xzm 4xzn 5lik 5liu 5liw 5lix 5liy 5m2f

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4GQG)