Chain 1 from PDB Type:PROTEIN Length:25
aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot Length:62
Alignment length:36
18 28 38
ATP5E_YEAST 9 ISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAF 44
SCOP domains ------------------------------------ SCOP domains
CATH domains ------------------------------------ CATH domains
Pfam domains ------------------------------------ Pfam domains
Sec.struct. author ......hhhhhh...-----------.......... Sec.struct. author
SAPs(SNPs) ------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------ PROSITE
Transcript 5 Exon 5.1 PDB: 1:8-43 (gaps) Transcript 5
3fks 1 8 ISYAAYLNVAAQAIR-----------VLNRSQTDAF 43
17 | - | 37
22 34
Chain A from PDB Type:PROTEIN Length:484
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:486
68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538
ATPA_YEAST 59 EANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains 3fksA01 A:24-95 [code=2.40.30.20, no name defined] 3fksA02 A:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksA03 A:382-509 [code=1 .20.150.20, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ......eeeeeeee..eeeeee.......eeeee....eeeeee....eeeeee..hhhhh....eeeeeeee.eee.hhhhh..eee................eee.....................hhhhhhhh........eeeee...hhhhhhhhhhhhhhhhhh........eeeeeeee.hhhhhhhhhhhhhh..hhh.eeeeeee...hhhhhhhhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............eeeeeeeeee......hhhhhhhhh...eeeeehhhhhhhh..........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh--........hhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: A:24-509 (gaps) UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks A 24 EANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403 | |413 423 433 443 453 463 473 483 493 503
407 |
410
Chain B from PDB Type:PROTEIN Length:479
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:482
69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519 529 539
ATPA_YEAST 60 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESF 541
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksB01 B:25-95 [code=2.40.30.20, no name defined] 3fksB02 B:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksB03 B:382-506 [code=1 .20.150.20, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeeeeee..eeeeee........eee.....eeeeeeee..eeeeee...........eee......eee........ee.................eee................ee...hhhhhhhh.ee......eeee...hhhhhhhhhhhhhhhhhhh.......eeeeeee..hhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............eeee..eeee......hhhhhhhhh...ee...hhhhhhhh..........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.---......hhhhhhhhhhhhhh........hhhhhhhhhhhhhh...........hhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript 1 Exon 1.1 PDB: B:25-506 (gaps) UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks B 25 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ---DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESF 506
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 | |414 424 434 444 454 464 474 484 494 504
407 411
Chain C from PDB Type:PROTEIN Length:484
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:484
70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
ATPA_YEAST 61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksC01 C:26-95 [code=2.40.30.20, no name defined] 3fksC02 C:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksC03 C:382-509 [code=1.20.150.20, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeeeee..eeeeee.......eeeee....eeeeee....eeeeee...........eeeeeeee.eee.hhhhh..ee.................eee................ee...hhhhhhhh.ee......eee....hhhhhhhhhhhhhhhhhh..hhhhh.eeeeeee..hhhhhhhhhhhhh...hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh............eeee..eee.......hhhhhhhhh...eeeeehhhhhhh...........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: C:26-509 UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks C 26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505
Chain D from PDB Type:PROTEIN Length:466
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:469
48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498
ATPB_YEAST 39 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 507
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksD01 D:6-82 [code=2.40.10.170, no name defined] 3fksD02 D:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksD03 D:358-474 Bovine Mitochondrial F 1-atpase; Atp Synthase Beta Chain; Chain D, do main 3 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeeeee..eeeee...........eeeee....eeeeeeeee....eeeeee...........eeee.....eeeehhhhh..ee................eeee...............eee...hhhhhh...eee..eeee.........hhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh....hhhhh.......hhhhhh.........eeeeee..hhhhh..hhhhhhhhh...ee...hhhhhh......................hhhhhhhhhhhhhhhhhhhhhhhhhhhh......--......hhhhhhhhh..................hhhhhhhhhhhhh-................hhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP----------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 4 Exon 4.1 PDB: D:6-474 (gaps) UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks D 6 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELS--DKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVL-GKYDNIPEHAFYMVGGIEDVVAKAEKLA 474
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 | | 405 415 425 435 445 | 455 465
397 | 445 |
400 447
Chain E from PDB Type:PROTEIN Length:468
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:468
50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
ATPB_YEAST 41 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains 3fksE01 E:8-82 [code=2.40.10.170, no name defined] 3fksE02 E:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksE03 E:358-475 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeee...eeeee..........eeeeee....eeeeeeeeeee..eeeeee.............eeeeee.ee..hhhhh..ee..................ee................ee...hhhhhhhh.ee...eeeee.....hhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhh....eeee.hhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhhh.....hhhhhh....hhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript 4 Exon 4.1 PDB: E:8-475 UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks E 8 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427 437 447 457 467
Chain F from PDB Type:PROTEIN Length:471
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:471
47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427 437 447 457 467 477 487 497 507
ATPB_YEAST 38 QSTPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksF01 F:5-82 [code=2.40.10.170, no name defined] 3fksF02 F:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksF03 F:358-475 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeeeeee..eeeeee..........eeeee....eeeeeeeee....eeeeee...........eeee.....eeee.......ee................eeee................ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhh........eeeeeee...hhhhhhhhhhhhh............eeeee....hhhhhhhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhh...........eeeeeeee.hhhh..hhhhhhhhhhh.ee...hhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhhh.....hhhhh....hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript 4 Exon 4.1 PDB: F:5-475 UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks F 5 QSTPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474
Chain G from PDB Type:PROTEIN Length:268
aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot Length:311
Alignment length:276
43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303
ATPG_YEAST 34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains 3fksG01 G:1-25,G:237-276 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3fksG01 G:1-25,G:237-276 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......--------...eeeee........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhh...eeeeee.......hhhhhhhhhhhhhhh.hhhhh..eeeeee.........eeeeee.hhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA PROSITE
Transcript 2 Exon 2.1 PDB: G:1-276 (gaps) UniProt: 1-311 [INCOMPLETE] Transcript 2
3fks G 1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLD--------PKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 276
10 20 30 40 50 60| 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
61 70
Chain H from PDB Type:PROTEIN Length:116
aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot Length:160
Alignment length:125
42 52 62 72 82 92 102 112 122 132 142 152
ATPD_YEAST 33 KLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQS 157
SCOP domains ----------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee..............eeee....eeee.......eeee...eeeeee..eeeeee...eeeee.....eeee....--.....---..............----.....hhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 Exon 3.1 PDB: H:11-135 (gaps) UniProt: 1-160 [INCOMPLETE] Transcript 3
3fks H 11 KLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEA--LESFS---IKNLLAEAKKNVSS----EAAEAAIQVEVLENLQS 135
20 30 40 50 60 70 80 90 | | -| 110 | 120 130
90 93 97 101 114 119
Chain I from PDB Type:PROTEIN Length:46
aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot Length:62
Alignment length:54
18 28 38 48 58
ATP5E_YEAST 9 ISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQYKNGTAASEPTPITK 62
SCOP domains ------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhh..----...h-hhhh......eeee...---......ee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------ PROSITE
Transcript 5 Exon 5.1 PDB: I:8-61 (gaps) UniProt: 1-62 Transcript 5
3fks I 8 ISYAAYLNVAAQAIRS----ELQT-SVLNRSQTDAFYTQYKN---ASEPTPITK 61
17 | -| | | 37 47 | | 57
23 28 31 | 49 53
33
Chain J from PDB Type:PROTEIN Length:481
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:484
70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
ATPA_YEAST 61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksJ01 J:26-95 [code=2.40.30.20, no name defined] 3fksJ02 J:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksJ03 J:382-509 [code= 1.20.150.20, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeeeee..eeeeee.......eeee.....eeeeeee....eeeee...........eeeeeeee.eeeehhhhh..eee...............eeee.....................hhhhhhhh.......eeeee....hhhhhhhhhhhhhhhhhh........eeeeeee..hhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhh...........eeeeeeeee.......hhhhhhhhhhh.eeeeehhhhhhh..............hhhhhhhhhhhhhh.hhhhhhhhhhhh....---....hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: J:26-509 (gaps) UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks J 26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFA---SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405| | 415 425 435 445 455 465 475 485 495 505
406 410
Chain K from PDB Type:PROTEIN Length:484
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:488
62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 532
ATPA_YEAST 53 IKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATES 540
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksK01 K:18-95 [code=2.40.30.20, no name defined] 3fksK02 K:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksK03 K:382-505 [code=1 .20.150.20, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............eeeeeeee..eeeeee.......eeee.....eeeeeee...eeeee...hhhhh....eeeeeeee.eee........ee.................eee................ee...hhhhhhhh.ee.....eeeee...hhhhhhhhhhhhhhhhhhh.......eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............eeee..eeee......hhhhhhhhhhh.eeeeehhhhhhhh..........ee..hhhhhhhhhhhhh.hhhhhhhhhhhhhh...----.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...........hhhhhhhhhhhhh..hhhhhhhhhhh..hhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP----------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: K:18-505 (gaps) UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks K 18 IKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ----LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATES 505
27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 | 417 427 437 447 457 467 477 487 497
407 412
Chain L from PDB Type:PROTEIN Length:484
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:484
70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
ATPA_YEAST 61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksL01 L:26-95 [code=2.40.30.20, no name defined] 3fksL02 L:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksL03 L:382-509 [code=1.20.150.20, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeeee...eeeeee.......eeeee....eeeeee.....eeeee...........eee......eee.hhhhh..ee.................eee................ee...hhhhhhhh.ee.....eeeee...hhhhhhhhhhhhhhhhhh..hhhhh.eeeeeee..hhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhh....hhhhh..eeee..eeee......hhhhhhhhhhh.eeeeehhhhhhh...........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: L:26-509 UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks L 26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505
Chain M from PDB Type:PROTEIN Length:469
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:469
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499
ATPB_YEAST 40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksM01 M:7-82 [code=2.40.10.170, no name defined] 3fksM02 M:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksM03 M:358-475 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeee..eeeee...........eeee......eeeeeeee....eeeeee...........eeee.....eeeehhhhh..ee................eeee...............eee...hhhhhhhh.eee..eeee......hhhhhhhhhhhhh.......eeeeee..hhhhhhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhhhhh.ee...hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh.....hhhhhh.......hhhhhhhhhhhhh......hhhhh....hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript 4 Exon 4.1 PDB: M:7-475 UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks M 7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
Chain N from PDB Type:PROTEIN Length:466
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:467
50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
ATPB_YEAST 41 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 507
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksN01 N:8-82 [code=2.40.10.170, no name defined] 3fksN02 N:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksN03 N:358-474 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, doma in 3 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeee..eeeee...........eeeee....eeeeeeeee....eeeeee.............ee.....eee.hhhhh..ee.................eee................ee.....hhhhhh.ee...eeeee.....hhhhhhhhhhhhhhhh....eeeeeeeehhhhhhhhhhhhhhhh.........eeeeeee...hhhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhhh...hhhhh....hhhhhhhhh........eeeeeee..hhhhh..hhhhhhhhh...eeee.hhhhhh......................hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhh......hhhhhhhhhhhhh-hhh...hhhhh.....hhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP----------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 4 Exon 4.1 PDB: N:8-474 (gaps) UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks N 8 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVL-GKYDNIPEHAFYMVGGIEDVVAKAEKLA 474
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427 437 447 457 467
445 |
447
Chain O from PDB Type:PROTEIN Length:469
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:469
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499
ATPB_YEAST 40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksO01 O:7-82 [code=2.40.10.170, no name defined] 3fksO02 O:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksO03 O:358-475 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeee..eeeee..........eeeeee....eeeeeeeeeee..eeeee............eeeeeeee.eeee.......ee................eeee................ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhh.......eeeeee...hhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhh.........eeeeeeee.hhhh..hhhhhhhhh...ee...hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhhh.....hhhhh.....hhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript 4 Exon 4.1 PDB: O:7-475 UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks O 7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
Chain P from PDB Type:PROTEIN Length:235
aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot Length:311
Alignment length:276
43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303
ATPG_YEAST 34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains 3fksP01 P:1-25,P:237-276 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3fksP01 P:1-25,P:237-276 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.-hhhhhhhhhhhhhhhhh-----------------.eee...........hhhhhhhhh---------.eeehhhhhhhhhhhh......ee......--hhhhhhhhhhhhhh..hhhhh.-.eee.ee.......ee..ee..hhhhhhh....-----------hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA PROSITE
Transcript 2 Exon 2.1 PDB: P:1-276 (gaps) UniProt: 1-311 [INCOMPLETE] Transcript 2
3fks P 1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAK-SAKKMDEAEQLFYKNAE-----------------IVAITSDKGLCGSIHSQLAKAVRR---------IVTIGDKIKMQLLRTHPNNIKLSINGIGKD--TFQESALIADKLLSVMKAGTYP-ISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSF-----------PRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 276
10 20 30 |40 50 | - - | 80 90 | - |110 120 130 | 140 150 160 | 170 180 190 | - | 210 220 230 240 250 260 270
38 | 56 74 97 107 136 | 160 | 194 206
40 139 162
Chain Q from PDB Type:PROTEIN Length:68
aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot Length:160
Alignment length:125
43 53 63 73 83 93 103 113 123 133 143 153
ATPD_YEAST 34 LQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSV 158
SCOP domains ----------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........----------.................--.....-------------------...........-------------.....hhhhh...-------------.....hhhhh.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 Exon 3.1 PDB: Q:12-136 (gaps) UniProt: 1-160 [INCOMPLETE] Transcript 3
3fks Q 12 LQFALPHE----------VNLPAKSGRIGVLANHV--VEQLL-------------------GFATVQPDSQL-------------SQENIKNLLAEAK-------------AAIQVEVLENLQSV 136
| - 31 41 | |51 | - - | 81 | - | 101 | - - | 131
19 30 46 49 53 73 83 97 109 123
Chain R from PDB Type:PROTEIN Length:25
aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot Length:62
Alignment length:37
21 31 41
ATP5E_YEAST 12 AAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQY 48
SCOP domains ------------------------------------- SCOP domains
CATH domains ------------------------------------- CATH domains
Pfam domains ------------------------------------- Pfam domains
Sec.struct. author .......------------.................. Sec.struct. author
SAPs(SNPs) ------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------- PROSITE
Transcript 5 Exon 5.1 PDB: R:11-47 (gaps) Transcript 5
3fks R 11 AAYLNVA------------QTASVLNRSQTDAFYTQY 47
| - 30 40
17 30
Chain S from PDB Type:PROTEIN Length:481
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:483
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531 541
ATPA_YEAST 62 LNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksS01 S:27-95 [code=2.40.30.20, no name defined] 3fksS02 S:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksS03 S:382-509 [code=1 .20.150.20, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeee...eeeeee.......eeeee....eeeeeee...eeeeee..hhhhh....eeeeeeee.eeeehhhhh..ee................eeee.....................hhhhhh..........eeee....hhhhhhhhhhhhhhhhhh..hhhhh.eeeeeee..hhhhhhhhhhhhhhh.......eeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh...........eeee..eee.......hhhhhhhhh...eeeeehhhhhhhh..........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhh.....--....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: S:27-509 (gaps) UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks S 27 LNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406| | 416 426 436 446 456 466 476 486 496 506
407 |
410
Chain T from PDB Type:PROTEIN Length:473
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:485
69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519 529 539
ATPA_YEAST 60 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksT01 T:25-95 [code=2.40.30.20, no name defined] 3fksT02 T:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksT03 T:382-509 [co de=1.20.150.20, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeee..eeeeee........eeee....eeeeeee....eeeee............eee.....eee.hhhhh..ee.................eee................ee...hhhhhhhh.ee......eee....hhhhhhhhhhhhh.............eeeeeee..hhhhhhhhhhhhh..hhhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh.-.eeee..hhhhhhhhhhhhhhh.....hhhhh...hhhhhhhhhh...-.......-.eee..eee.......hhhhhhhhhhh.ee...hhhhhh............ee..hhhhhhhhhhhhh.hhhhhhhhhhhh.--------.....hhhhhhhhhhhh..........hhhhhhhhhhhhh-............hhhhhh.......hhhhhhhhhhhh..hhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: T:25-509 (gaps) UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks T 25 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNG-HALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAA-LSEKEGS-SLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVA--------LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV-GHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 |-| 274 284 294 304 314 | 324 334 344 354 364 374 384 394 |- 414 424 434 444 |454 464 474 484 494 504
263 | 312 | 320 | 403 412 451 |
265 314 322 453
Chain U from PDB Type:PROTEIN Length:477
aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot Length:545
Alignment length:484
70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540
ATPA_YEAST 61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksU01 U:26-95 [code=2.40.30.20, no name defined] 3fksU02 U:96-381 P-loop containing nucleotide triphosphate hydrolases 3fksU03 U:382-509 [code=1. 20.150.20, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeeeee..eeeeee........eeee....eeeeeee....eeeee...........eeee.....eee........ee.................eee.....................hhhhhhhh........eeee....hhhhhhhhhhhhhhhhhh.......eeeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....-......eeeeeeeee.......hhhhhhhhh...eeeeehhhhhhh...........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.-----hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh.-......hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: U:26-509 (gaps) UniProt: 1-545 [INCOMPLETE] Transcript 1
3fks U 26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKL-EKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQF-----ASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGH-DGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 |-| 325 335 345 355 365 375 385 395 405 | 415 425 435 445 |-| 465 475 485 495 505
314 | 408 414 454 |
316 456
Chain V from PDB Type:PROTEIN Length:455
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:468
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499
ATPB_YEAST 40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 507
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains 3fksV01 V:7-82 [code=2.40.10.170, no name defined] 3fksV02 V:83-357 P-loop containing nucleotide tri phosphate hydrolases 3fksV03 V:358-474 Bovine Mitochondrial F1-atpase; Atp Sy nthase Beta Chain; Chain D, domain 3 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....eeeeee..eeeee..........eeeeeee..eeeeeeeeeeee..eeeeee.............eeeeee.eeeehhhhh..ee................eeee............-...-....hhhhhh........eee..-----.hhhhhh.............eeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhh...hhhhh...hhhhhhhhhhhh......eeeeee..........hhhhhhhhh...ee.---......-....-...............hhhhhhhhhhhhhhhhhhhhh.hhhhhh.....hhhhhhhhhhhhhhhh.-...................hhhhh.hhhhhh.......hhhhh.....hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP----------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 4 Exon 4.1 PDB: V:7-474 (gaps) UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks V 7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQS-SAE-LETGIKVVDLLAPYARGGKIGLF-----GKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATT---RGISEL-IYPA-DPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRF-SQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 474
16 26 36 46 56 66 76 86 96 106 116 126 | | | 136 146 156 | 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 | -| | 346| | 356 366 376 386 396 406 |416 426 436 446 456 466
128 | | | 156 162 333 337 342 | | | 413 |
130 | | 344 | | 415
132 | 347 |
134 349
Chain W from PDB Type:PROTEIN Length:466
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:466
50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
ATPB_YEAST 41 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKL 506
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksW01 W:8-82 [code=2.40.10.170, no name defined] 3fksW02 W:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksW03 W:358-473 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeee..eeeee..........eeeee........eeeeee....eeeee.............eeeeeee.eeee.......eee...............eeee.....................hhhhhhhh......eeeee.....hhhhhhhhhhhhhh......eeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhhhhh.eeee.hhhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh....hhhhhh........hhhhhhhhhhhhhhh.....hhhhh....hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP---------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 4 Exon 4.1 PDB: W:8-473 UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks W 8 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKL 473
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427 437 447 457 467
Chain X from PDB Type:PROTEIN Length:469
aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot Length:511
Alignment length:469
49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499
ATPB_YEAST 40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3fksX01 X:7-82 [code=2.40.10.170, no name defined] 3fksX02 X:83-357 P-loop containing nucleotide triphosphate hydrolases 3fksX03 X:358-475 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeeee..eeeee...........eeeeee..eeeeeeeeeeee..eeeeee.............ee.....eeee.......ee................eeee.....................hhhhhhhh......eeee......hhhhhhhhhhhhh......eeeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh....eeeeee..hhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh.........eeeeee..hhhhh..hhhhhhhhhhh.eee..hhhhhhhh..........ee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh.......hhhhh....hhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript 4 Exon 4.1 PDB: X:7-475 UniProt: 1-511 [INCOMPLETE] Transcript 4
3fks X 7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386 396 406 416 426 436 446 456 466
Chain Y from PDB Type:PROTEIN Length:187
aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot Length:311
Alignment length:276
43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303
ATPG_YEAST 34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains 3fksY01 Y:1-25,Y:237-272 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3fksY01 Y:1-25,Y:237-272 ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------..------------hhhhhhhhhh....---...-hhhhhhh......------....-...hhhhhhhhhhhh......--------.eee.......eee.-----------------------------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA PROSITE
Transcript 2 Exon 2.1 PDB: Y:1-276 (gaps) UniProt: 1-311 [INCOMPLETE] Transcript 2
3fks Y 1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEA-----------------------------IT------------LAKAVRRHLNDQPN---VTI-DKIKMQLLRTHPN------NGIG-DAPTFQESALIADKLLSVMKA--------FYNDPVSSLSFEPSE-----------------------------LFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 276
10 20 30 40 | - - - || - -| 100 | 110 | 120 | -| | | 140 150 | - | 170 |- - - 210 220 230 240 250 260 270
47 77| 91 104 108 | | 124 131 | | 156 165 179 209
78 110 | 134 |
112 136
Chain Z from PDB Type:PROTEIN Length:11
aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot Length:160
Alignment length:11
152
ATPD_YEAST 143 AEAAIQVEVLE 153
SCOP domains ----------- SCOP domains
CATH domains ----------- CATH domains
Pfam domains ----------- Pfam domains
Sec.struct. author .hhhhhhh... Sec.struct. author
SAPs(SNPs) ----------- SAPs(SNPs)
PROSITE ----------- PROSITE
Transcript 3 Exon 3.1 Transcript 3
3fks Z 121 AEAAIQVEVLE 131
130
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
Description
