No.	Name	Count	Type	Full Name
1	ANP	15	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	15	Ligand/Ion	MAGNESIUM ION

No.	Name	Count	Type	Full Name
1	ANP	5	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

No.	Name	Count	Type	Full Name
1	ANP	5	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

No.	Name	Count	Type	Full Name
1	ANP	5	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:173 , GLN A:174 , THR A:175 , GLY A:176 , LYS A:177 , THR A:178 , ALA A:179 , PHE A:359 , ARG A:364 , GLN A:432 , GLN A:434 , MG A:700	BINDING SITE FOR RESIDUE ANP A 600
02	AC2	SOFTWARE	THR A:178 , ANP A:600	BINDING SITE FOR RESIDUE MG A 700
03	AC3	SOFTWARE	GLN B:174 , THR B:175 , GLY B:176 , LYS B:177 , THR B:178 , ALA B:179 , PHE B:359 , ARG B:364 , GLN B:432 , GLN B:434 , MG B:700	BINDING SITE FOR RESIDUE ANP B 600
04	AC4	SOFTWARE	THR B:178 , ANP B:600	BINDING SITE FOR RESIDUE MG B 700
05	AC5	SOFTWARE	ARG C:173 , GLN C:174 , THR C:175 , GLY C:176 , LYS C:177 , THR C:178 , ALA C:179 , GLU C:330 , PHE C:359 , ARG C:364 , GLN C:432 , GLN C:434 , MG C:700 , TYR F:368	BINDING SITE FOR RESIDUE ANP C 600
06	AC6	SOFTWARE	THR C:178 , ANP C:600	BINDING SITE FOR RESIDUE MG C 700
07	AC7	SOFTWARE	ARG C:375 , GLY D:160 , GLY D:162 , LYS D:163 , THR D:164 , VAL D:165 , ARG D:190 , TYR D:311 , TYR D:345 , PHE D:418 , ALA D:421 , PHE D:424 , MG D:700	BINDING SITE FOR RESIDUE ANP D 600
08	AC8	SOFTWARE	THR D:164 , ANP D:600	BINDING SITE FOR RESIDUE MG D 700
09	AC9	SOFTWARE	SER B:346 , VAL B:373 , ARG B:375 , GLY F:158 , ALA F:159 , GLY F:160 , VAL F:161 , GLY F:162 , LYS F:163 , THR F:164 , VAL F:165 , GLU F:189 , ARG F:190 , TYR F:345 , PHE F:418 , ALA F:421 , PHE F:424 , MG F:700	BINDING SITE FOR RESIDUE ANP F 600
10	BC1	SOFTWARE	THR F:164 , GLU F:189 , ARG F:190 , GLU F:193 , ANP F:600	BINDING SITE FOR RESIDUE MG F 700
11	BC2	SOFTWARE	ARG J:173 , GLN J:174 , THR J:175 , GLY J:176 , LYS J:177 , THR J:178 , ALA J:179 , PHE J:359 , ARG J:364 , GLN J:434 , MG J:700	BINDING SITE FOR RESIDUE ANP J 600
12	BC3	SOFTWARE	THR J:178 , ANP J:600	BINDING SITE FOR RESIDUE MG J 700
13	BC4	SOFTWARE	ARG K:173 , GLN K:174 , THR K:175 , GLY K:176 , LYS K:177 , THR K:178 , ALA K:179 , PHE K:359 , ARG K:364 , GLN K:432 , GLN K:434 , MG K:700	BINDING SITE FOR RESIDUE ANP K 600
14	BC5	SOFTWARE	THR K:178 , ASP K:271 , ANP K:600	BINDING SITE FOR RESIDUE MG K 700
15	BC6	SOFTWARE	ARG L:173 , GLN L:174 , THR L:175 , GLY L:176 , LYS L:177 , THR L:178 , ALA L:179 , GLU L:330 , PHE L:359 , ARG L:364 , GLN L:432 , GLN L:434 , MG L:700 , ASP O:359	BINDING SITE FOR RESIDUE ANP L 600
16	BC7	SOFTWARE	THR L:178 , ANP L:600	BINDING SITE FOR RESIDUE MG L 700
17	BC8	SOFTWARE	ARG L:375 , ALA M:159 , GLY M:160 , VAL M:161 , GLY M:162 , LYS M:163 , THR M:164 , VAL M:165 , ARG M:190 , TYR M:311 , TYR M:345 , PHE M:418 , ALA M:421 , PHE M:424 , MG M:700	BINDING SITE FOR RESIDUE ANP M 600
18	BC9	SOFTWARE	THR M:164 , ANP M:600	BINDING SITE FOR RESIDUE MG M 700
19	CC1	SOFTWARE	ILE K:345 , SER K:346 , VAL K:373 , ARG K:375 , ALA O:159 , GLY O:160 , VAL O:161 , GLY O:162 , LYS O:163 , THR O:164 , VAL O:165 , GLU O:189 , ARG O:190 , TYR O:345 , PHE O:418 , PHE O:424 , THR O:425 , MG O:700	BINDING SITE FOR RESIDUE ANP O 600
20	CC2	SOFTWARE	THR O:164 , GLU O:189 , ARG O:190 , GLU O:193 , ANP O:600	BINDING SITE FOR RESIDUE MG O 700
21	CC3	SOFTWARE	ARG S:173 , GLN S:174 , THR S:175 , GLY S:176 , LYS S:177 , THR S:178 , ALA S:179 , PHE S:359 , ARG S:364 , GLN S:432 , GLN S:434 , MG S:700	BINDING SITE FOR RESIDUE ANP S 600
22	CC4	SOFTWARE	THR S:178 , ANP S:600	BINDING SITE FOR RESIDUE MG S 700
23	CC5	SOFTWARE	GLN T:174 , THR T:175 , GLY T:176 , LYS T:177 , THR T:178 , ALA T:179 , GLU T:330 , PHE T:359 , ARG T:364 , GLN T:432 , GLN T:434 , MG T:700 , ASP W:359	BINDING SITE FOR RESIDUE ANP T 600
24	CC6	SOFTWARE	THR T:178 , ANP T:600	BINDING SITE FOR RESIDUE MG T 700
25	CC7	SOFTWARE	ARG U:173 , GLN U:174 , THR U:175 , GLY U:176 , LYS U:177 , THR U:178 , ALA U:179 , PHE U:359 , ARG U:364 , GLN U:432 , GLN U:434 , MG U:700 , SER X:355 , TYR X:368	BINDING SITE FOR RESIDUE ANP U 600
26	CC8	SOFTWARE	THR U:178 , ASP U:271 , ANP U:600	BINDING SITE FOR RESIDUE MG U 700
27	CC9	SOFTWARE	SER U:374 , ARG U:375 , GLY V:158 , GLY V:160 , VAL V:161 , GLY V:162 , LYS V:163 , THR V:164 , VAL V:165 , GLU V:189 , ARG V:190 , TYR V:311 , TYR V:345 , MG V:700	BINDING SITE FOR RESIDUE ANP V 600
28	DC1	SOFTWARE	LYS V:163 , THR V:164 , ANP V:600	BINDING SITE FOR RESIDUE MG V 700
29	DC2	SOFTWARE	ILE T:345 , SER T:346 , VAL T:373 , ARG T:375 , ALA X:159 , GLY X:160 , GLY X:162 , LYS X:163 , THR X:164 , VAL X:165 , GLU X:189 , ARG X:190 , TYR X:345 , PHE X:418 , ALA X:421 , PHE X:424 , MG X:700	BINDING SITE FOR RESIDUE ANP X 600
30	DC3	SOFTWARE	THR X:164 , GLU X:189 , ANP X:600	BINDING SITE FOR RESIDUE MG X 700

No.	Residues
1	Asp A:271	-	Asp A:272
2	Arg A:364	-	Pro A:365
3	Asp B:271	-	Asp B:272
4	Arg B:364	-	Pro B:365
5	Phe B:408	-	Gly B:409
6	Asp C:271	-	Asp C:272
7	Arg C:364	-	Pro C:365
8	Asp D:256	-	Asn D:257
9	Tyr D:345	-	Pro D:346
10	Asp E:256	-	Asn E:257
11	Tyr E:345	-	Pro E:346
12	Asp F:256	-	Asn F:257
13	Tyr F:345	-	Pro F:346
14	Asp J:271	-	Asp J:272
15	Arg J:364	-	Pro J:365
16	Asp K:271	-	Asp K:272
17	Arg K:364	-	Pro K:365
18	Asp L:271	-	Asp L:272
19	Arg L:364	-	Pro L:365
20	Asp M:256	-	Asn M:257
21	Tyr M:345	-	Pro M:346
22	Asp N:256	-	Asn N:257
23	Tyr N:345	-	Pro N:346
24	Asp O:256	-	Asn O:257
25	Tyr O:345	-	Pro O:346
26	Asp S:271	-	Asp S:272
27	Arg S:364	-	Pro S:365
28	Asp T:271	-	Asp T:272
29	Arg T:364	-	Pro T:365
30	Asp U:271	-	Asp U:272
31	Arg U:364	-	Pro U:365
32	Asp V:256	-	Asn V:257
33	Tyr V:345	-	Pro V:346
34	Asp W:256	-	Asn W:257
35	Tyr W:345	-	Pro W:346
36	Asp X:256	-	Asn X:257
37	Tyr X:345	-	Pro X:346

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ATPG_YEAST_001 *	S	207	I	ATPG_YEAST	---	---	G/P	S	174	I
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	G/P/Y	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ATPG_YEAST_001 *	S	207	I	ATPG_YEAST	---	---	G	S	174	I
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	G	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ATPG_YEAST_001 *	S	207	I	ATPG_YEAST	---	---	P	S	174	I
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	P	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	Y	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	3	G:263-276 P:263-276 Y:263-276
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	9	D:346-355 E:346-355 F:346-355 M:346-355 N:346-355 O:346-355 V:346-355 W:346-355 X:346-355
				ATPA_YEAST	400-409	9	A:365-374 B:365-374 C:365-374 J:365-374 K:365-374 L:365-374 S:365-374 T:365-374 U:365-374

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	1	G:263-276 - -
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	3	D:346-355 E:346-355 F:346-355 - - - - - -
				ATPA_YEAST	400-409	3	A:365-374 B:365-374 C:365-374 - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	1	- P:263-276 -
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	3	- - - M:346-355 N:346-355 O:346-355 - - -
				ATPA_YEAST	400-409	3	- - - J:365-374 K:365-374 L:365-374 - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	1	- - Y:263-276
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	3	- - - - - - V:346-355 W:346-355 X:346-355
				ATPA_YEAST	400-409	3	- - - - - - S:365-374 T:365-374 U:365-374

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	YBL099W	1	YBL099W.1	II:37050-38687	1638	ATPA_YEAST	1-545	545	9	A:26-510 B:25-510 C:26-509 J:26-509 (gaps) K:21-507 (gaps) L:26-509 (gaps) S:26-510 (gaps) T:25-510 (gaps) U:26-510	485 486 484 484 487 484 485 486 485
2.1	YBR039W	1	YBR039W.1	II:315575-316510	936	ATPG_YEAST	1-311	311	3	G:1-276 (gaps) P:1-276 (gaps) Y:1-276 (gaps)	276 276 276
3.1	YDL004W	1	YDL004W.1	IV:443027-443509	483	ATPD_YEAST	1-160	160	2	H:10-136 (gaps) Q:11-136 (gaps)	127 126
4.1	YJR121W	1	YJR121W.1	X:647597-649132	1536	ATPB_YEAST	1-511	511	9	D:6-475 E:7-475 F:7-475 M:7-466 N:8-475 (gaps) O:7-475 V:7-381 (gaps) W:8-475 X:7-475	470 469 469 460 468 469 375 468 469
5.1	YPL271W	1	YPL271W.1	XVI:30079-30267	189	ATP5E_YEAST	1-62	62	2	I:4-61 (gaps) R:4-61 (gaps)	58 58

Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:485
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:485
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540     
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee....eeeee...........eeeeeeee.eeeehhhhh..eee...............eeee.....................hhhhhhhh........eeee....hhhhhhhhhhhhhhhhhh..hhhhh.eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeeee.......hhhhhhhhh....eeeehhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: A:26-510 UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                   Transcript 1
                 3ofn A  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505     

Chain B from PDB  Type:PROTEIN  Length:486
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:486
                                    69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539      
           ATPA_YEAST    60 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeeeee..eeeeee.......eeeee....eeeeeeee..eeeeee..hhhhh....eeeeeeee.eeeehhhhh..ee................eeee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeeeeee..hhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............eeeeeeeee.......hhhhhhhhh...eeeeehhhhhhh...........ee.......hhhhhhhh.hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: B:25-510 UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 1
                 3ofn B  25 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504      

Chain C from PDB  Type:PROTEIN  Length:484
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee....eeeee...........eeeeeeee.eeeehhhhh..ee................eeee.....................hhhhhhhh........eeeee...hhhhhhhhhhhhhhhhhh........eeeeeee..hhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh....hhhhh....hhhhhhhhhh....hhhhh..eeeeeeeeee......hhhhhhhhhhh.eeeeehhhhhh............ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: C:26-509 UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                  Transcript 1
                 3ofn C  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505    

Chain D from PDB  Type:PROTEIN  Length:470
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:470
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508
           ATPB_YEAST    39 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..ee.................eee......hhhhh.....ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhh.......eeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeeeee.hhhh..hhhhhhhhh...eeeeehhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh.......hhhhh...hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: D:6-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                     Transcript 4
                 3ofn D   6 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475

Chain E from PDB  Type:PROTEIN  Length:469
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:469
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499         
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..eeeee...........eee.........eeeeeeee..eeeeee...........eeee.....eee.hhhhh..ee.................eee.....................hhhhhhhh......eeeee.....hhhhhhhhhhhhhhhh....eeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh...ee..eeeeeeee..hhhhh..hhhhhhhhh...eeee.hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhhh.....hhhhhh...hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: E:7-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 4
                 3ofn E   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         

Chain F from PDB  Type:PROTEIN  Length:469
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:469
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499         
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeee.........eeeeee....eeeeeeeeeee..eeeeee...........eeeeeeee.eeeehhhhh..ee................eeee................ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhh......eeeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhh........eeeeeeeee.hhhh..hhhhhhhhhhh.eeeeehhhhhh............ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhh......hhhhh....hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: F:7-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 4
                 3ofn F   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         

Chain G from PDB  Type:PROTEIN  Length:268
 aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot  Length:311

    Alignment length:276
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303      
           ATPG_YEAST    34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......--------.eeeeee..........hhhhhhhhhhhhh.....eeeeehhhhhhhhhh.....eeeeee.......hhhhhhhhhhhhhhh.hhhhh.eeeeeeee.......eeeeeee.hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA   PROSITE
               Transcript 2 Exon 2.1  PDB: G:1-276 (gaps) UniProt: 1-311 [INCOMPLETE]                                                                                                                                                                                                                            Transcript 2
                 3ofn G   1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDV--------KELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 276
                                    10        20        30        40        50        60 |       -|       80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
                                                                                        62       71                                                                                                                                                                                                             

Chain H from PDB  Type:PROTEIN  Length:122
 aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:127
                                    41        51        61        71        81        91       101       111       121       131       141       151       
           ATPD_YEAST    32 LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSV 158
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......ee.....eeeeee..eeeee.......eee...ee..ee....ee.eee...eeee.....eeee...eee.hhh.....hhhhhhhhhh..-----hhhhhh.hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 3 Exon 3.1  PDB: H:10-136 (gaps) UniProt: 1-160 [INCOMPLETE]                                                                      Transcript 3
                 3ofn H  10 LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVS-----EAAEAAIQVEVLENLQSV 136
                                    19        29        39        49        59        69        79        89        99       109   |   119       129       
                                                                                                                                 113   119                 

Chain I from PDB  Type:PROTEIN  Length:55
 aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot  Length:62

    Alignment length:58
                                    14        24        34        44        54        
          ATP5E_YEAST     5 RKAGISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQYKNGTAASEPTPITK  62
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee...---......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
               Transcript 5 Exon 5.1  PDB: I:4-61 (gaps) UniProt: 1-62 [INCOMPLETE]    Transcript 5
                 3ofn I   4 RKAGISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQYKN---ASEPTPITK  61
                                    13        23        33        43     |  53        
                                                                        49  53        

Chain J from PDB  Type:PROTEIN  Length:482
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee...eeeeee..hhhhh....eeeeeeee.eeeehhhhh..ee................eeee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhh.........eeeeeeee..hhhhhhhhhhhhhhhhhhh.eeeeee....hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh....hhhhh...hhhhhhhhhh............eeeeeeeee.......hhhhhhhhhhh.eeee.hhhhhhh...........ee.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.--......hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: J:26-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 1
                 3ofn J  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405 |  |  415       425       435       445       455       465       475       485       495       505    
                                                                                                                                                                                                                                                                                                                                                                                                                       407  |                                                                                                   
                                                                                                                                                                                                                                                                                                                                                                                                                          410                                                                                                   

Chain K from PDB  Type:PROTEIN  Length:483
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:487
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       
           ATPA_YEAST    56 VSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFV 542
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeeeeee..eeeeee.......eeeee....eeeeeeee..eeeeee..hhhhh....eeeeeeee.eeee.......ee................eeee.....................hhhhhhhh........eeee....hhhhhhhhhhhhhhhhhh........eeeeeee..hhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............eeeeeeeee.......hhhhhhhhh...eeeeehhhhhhh.....eeeeeeee.......hhhhhhhh.hhhhhhhhhhhhh....----....hhhhhhhhhhhhhhh........hhhhhhhhhhhhhh.........hhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: K:21-507 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                              Transcript 1
                 3ofn K  21 VSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ----LDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFV 507
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400      |  - |     420       430       440       450       460       470       480       490       500       
                                                                                                                                                                                                                                                                                                                                                                                                                            407  412                                                                                               

Chain L from PDB  Type:PROTEIN  Length:479
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee....eeeee...........eeeeeeee.eeeehhhhh..ee................eeee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhhhh..hhhh.eeeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhhh...hhhhh...hhhhhhhhhh............eeeeeeeee.......hhhhhhhhh...eeeeehhhhhh............ee.hhhhhhhhhhhhh..hhhhhhhhhhh....-----......hhhhhhhhhhhh..........hhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: L:26-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 1
                 3ofn L  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAF-----DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405     | 415       425       435       445       455       465       475       485       495       505    
                                                                                                                                                                                                                                                                                                                                                                                                                     405   411                                                                                                  

Chain M from PDB  Type:PROTEIN  Length:460
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:460
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDV 499
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee........ee.................eee...............eee...hhhhhhhh.eee..eeeeee....hhhhhhhhhhhhhh......eeeeee...hhhhhhhhhhhhh...........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeeeee.hhhh..hhhhhhhhh...eeee.hhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.....hhhhhh......hhhhhhhhhhhhhhh................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 4 Exon 4.1  PDB: M:7-466 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 4
                 3ofn M   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDV 466
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466

Chain N from PDB  Type:PROTEIN  Length:463
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:468
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500        
           ATPB_YEAST    41 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee........ee.................eee......hhhhh..........hhhhhhhh......eeeee.....hhhhhhhhhhhhhhhh....eeeeeeeehhhhhhhhhhhhhh...........eeeeeee...hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhh..eeeeee.hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.-----hhhhhhhhhhhhhhhhhh.....hhhhhh......hhhhhhhhhhhhhhh.....hhhhh....hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: N:8-475 (gaps) UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                            Transcript 4
                 3ofn N   8 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILG-----EQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387    |    -|      407       417       427       437       447       457       467        
                                                                                                                                                                                                                                                                                                                                                                                                                          392   398                                                                             

Chain O from PDB  Type:PROTEIN  Length:469
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:469
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499         
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..ee.................eee................ee...hhhhhhh..ee...eeeeeee...hhhhhhhhhhhhhhhhhh.eeeeeee...hhhhhhhhhhhhhh...........eeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh........eeeeeeeeeehhhh..hhhhhhhhhhh.ee...hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh......hhhhh....hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: O:7-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 4
                 3ofn O   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         

Chain P from PDB  Type:PROTEIN  Length:268
 aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot  Length:311

    Alignment length:276
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303      
           ATPG_YEAST    34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............--------.eeeeee........hhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhh...eeeeee.......hhhhhhhhhhhhhhh.hhhhh.eeeeee...........eeee..hhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA   PROSITE
               Transcript 2 Exon 2.1  PDB: P:1-276 (gaps) UniProt: 1-311 [INCOMPLETE]                                                                                                                                                                                                                            Transcript 2
                 3ofn P   1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDV--------KELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 276
                                    10        20        30        40        50        60 |       -|       80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
                                                                                        62       71                                                                                                                                                                                                             

Chain Q from PDB  Type:PROTEIN  Length:101
 aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:126
                                    42        52        62        72        82        92       102       112       122       132       142       152      
           ATPD_YEAST    33 KLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSV 158
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ATP-synt_DE_N  -3ofnQ01 Q:11-89                                                           -------------     ------------------ Pfam domains (1)
           Pfam domains (2) ATP-synt_DE_N  -3ofnQ02 Q:11-89                                                           -------------     ------------------ Pfam domains (2)
         Sec.struct. author ..eee........--...eeeeee..eeeee.......eeee......ee.-------....eeeee.....eeeee..-----------.....hhhhhh..-----hhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 3 Exon 3.1  PDB: Q:11-136 (gaps) UniProt: 1-160 [INCOMPLETE]                                                                     Transcript 3
                 3ofn Q  11 KLQFALPHETLYS--EVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVME-------FISGGFATVQPDSQLCVTAIE-----------IKNLLAEAKKNVS-----EAAEAAIQVEVLENLQSV 136
                                    20  |  |  30        40        50        60|       70        80        |-         -|      110  |    120       130      
                                       23 26                                 61      69                  89         101         113   119                 

Chain R from PDB  Type:PROTEIN  Length:55
 aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot  Length:62

    Alignment length:58
                                    14        24        34        44        54        
          ATP5E_YEAST     5 RKAGISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQYKNGTAASEPTPITK  62
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
           Pfam domains (1) ATP-synt_Eps-3ofnR01 R:4-49                   ------------ Pfam domains (1)
           Pfam domains (2) ATP-synt_Eps-3ofnR02 R:4-49                   ------------ Pfam domains (2)
         Sec.struct. author .....hhhhhhhhhhhhh.........hhhhhh......eeee...---......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
               Transcript 5 Exon 5.1  PDB: R:4-61 (gaps) UniProt: 1-62 [INCOMPLETE]    Transcript 5
                 3ofn R   4 RKAGISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQYKN---ASEPTPITK  61
                                    13        23        33        43     |  53        
                                                                        49  53        

Chain S from PDB  Type:PROTEIN  Length:483
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:485
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540     
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee....eeeee..hhhhh....eeeeeeee.eeeehhhhh..eee...............eeee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhhhh.......eeeeeeee..hhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeeee.......hhhhhhhhh...eeeeehhhhhhh...........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.--...hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: S:26-510 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                            Transcript 1
                 3ofn S  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405 |  |  415       425       435       445       455       465       475       485       495       505     
                                                                                                                                                                                                                                                                                                                                                                                                                       407  |                                                                                                    
                                                                                                                                                                                                                                                                                                                                                                                                                          410                                                                                                    

Chain T from PDB  Type:PROTEIN  Length:484
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:486
                                    69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539      
           ATPA_YEAST    60 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeeeee..eeeeee........eeee....eeeeeee...eeeeee..hhhhh....eee......eee........eee................eee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhhhh..hhhhh.eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeeee.......hhhhhhhhh...eeeeehhhhhhhh..........ee.......hhhhhhhhhhhhhhhhhhhhhhhh..--.....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: T:25-510 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                             Transcript 1
                 3ofn T  25 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404  |  | 414       424       434       444       454       464       474       484       494       504      
                                                                                                                                                                                                                                                                                                                                                                                                                        407  |                                                                                                    
                                                                                                                                                                                                                                                                                                                                                                                                                           410                                                                                                    

Chain U from PDB  Type:PROTEIN  Length:485
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:485
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540     
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ATP-synt_ab_N-3ofnU01 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU10 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU19 U:386-490                                                                          -------------------- Pfam domains (1)
           Pfam domains (2) ATP-synt_ab_N-3ofnU02 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU11 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU20 U:386-490                                                                          -------------------- Pfam domains (2)
           Pfam domains (3) ATP-synt_ab_N-3ofnU03 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU12 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU21 U:386-490                                                                          -------------------- Pfam domains (3)
           Pfam domains (4) ATP-synt_ab_N-3ofnU04 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU13 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU22 U:386-490                                                                          -------------------- Pfam domains (4)
           Pfam domains (5) ATP-synt_ab_N-3ofnU05 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU14 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU23 U:386-490                                                                          -------------------- Pfam domains (5)
           Pfam domains (6) ATP-synt_ab_N-3ofnU06 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU15 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU24 U:386-490                                                                          -------------------- Pfam domains (6)
           Pfam domains (7) ATP-synt_ab_N-3ofnU07 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU16 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU25 U:386-490                                                                          -------------------- Pfam domains (7)
           Pfam domains (8) ATP-synt_ab_N-3ofnU08 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU17 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU26 U:386-490                                                                          -------------------- Pfam domains (8)
           Pfam domains (9) ATP-synt_ab_N-3ofnU09 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3ofnU18 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3ofnU27 U:386-490                                                                          -------------------- Pfam domains (9)
         Sec.struct. author .....eeeeeee..eeeeee.......eeeee....eeeeeee....eeeee..hhhhh.....eeeeeee.eeeehhhhh..eee...............eeee.....................hhhhhhhh........eeee....hhhhhhhhhhhhhhhh.........eeeeeeee..hhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeeee.......hhhhhhhhhhh.eeeeehhhhhhh...........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: U:26-510 UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                   Transcript 1
                 3ofn U  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505     

Chain V from PDB  Type:PROTEIN  Length:360
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:375
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409     
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTY 414
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..eeeee..........eeeeee....eeeeeeeeeee..eeeeee...........eeeeeeee.eee.hhhhh..eee................eee................---------..........eeee.......hhhhhhhhhhh........eeeeee..hhhhhhhhhhhh.............eeeeee....hhhhhhhhhhhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh.........eeeeee..hhhhh..hhhhhhhh....eee------..............ee.......hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP-------------------------- PROSITE
               Transcript 4 Exon 4.1  PDB: V:7-381 (gaps) UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                               Transcript 4
                 3ofn V   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAE---------DLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATT------SELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTY 381
                                    16        26        36        46        56        66        76        86        96       106       116       126     |   -     | 146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326      |  -   |   346       356       366       376     
                                                                                                                                                       132       142                                                                                                                                                                                            333    340                                         

Chain W from PDB  Type:PROTEIN  Length:468
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:468
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500        
           ATPB_YEAST    41 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee..eeeee..........eeeeee....eeeeeeeeeee..eeeeee...........eeeeeeee.eee.hhhhh..ee.................eee................ee...hhhhhhhh.ee...eeeee.....hhhhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhh...........eeeeee....hhhhhhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhhh...eeee.hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh......hhhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: W:8-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                   Transcript 4
                 3ofn W   8 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467        

Chain X from PDB  Type:PROTEIN  Length:469
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:469
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499         
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ------ATP-synt_ab_N-3ofnX01 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX10 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX19 X:368-475                                                                              Pfam domains (1)
           Pfam domains (2) ------ATP-synt_ab_N-3ofnX02 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX11 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX20 X:368-475                                                                              Pfam domains (2)
           Pfam domains (3) ------ATP-synt_ab_N-3ofnX03 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX12 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX21 X:368-475                                                                              Pfam domains (3)
           Pfam domains (4) ------ATP-synt_ab_N-3ofnX04 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX13 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX22 X:368-475                                                                              Pfam domains (4)
           Pfam domains (5) ------ATP-synt_ab_N-3ofnX05 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX14 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX23 X:368-475                                                                              Pfam domains (5)
           Pfam domains (6) ------ATP-synt_ab_N-3ofnX06 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX15 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX24 X:368-475                                                                              Pfam domains (6)
           Pfam domains (7) ------ATP-synt_ab_N-3ofnX07 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX16 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX25 X:368-475                                                                              Pfam domains (7)
           Pfam domains (8) ------ATP-synt_ab_N-3ofnX08 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX17 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX26 X:368-475                                                                              Pfam domains (8)
           Pfam domains (9) ------ATP-synt_ab_N-3ofnX09 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3ofnX18 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3ofnX27 X:368-475                                                                              Pfam domains (9)
         Sec.struct. author ...eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..ee.................eee................ee...hhhhhhh..ee...eeeeeee...hhhhhhhhhhhhh.......eeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh........eeeeeeeeeehhhh..hhhhhhhhhhh.eeee.hhhhhhh...........ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh......hhhhh....hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: X:7-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 4
                 3ofn X   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         

Chain Y from PDB  Type:PROTEIN  Length:115
 aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot  Length:311

    Alignment length:276
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303      
           ATPG_YEAST    34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ATP-synt-3ofnY01 Y:1-276                                                                                                                                                                                                                                                             Pfam domains (1)
           Pfam domains (2) ATP-synt-3ofnY02 Y:1-276                                                                                                                                                                                                                                                             Pfam domains (2)
           Pfam domains (3) ATP-synt-3ofnY03 Y:1-276                                                                                                                                                                                                                                                             Pfam domains (3)
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..----------------------------------------------------------------------------------------------...hhhhhhh-------------------------------------------------------------------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA   PROSITE
               Transcript 2 Exon 2.1  PDB: Y:1-276 (gaps) UniProt: 1-311 [INCOMPLETE]                                                                                                                                                                                                                            Transcript 2
                 3ofn Y   1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISA----------------------------------------------------------------------------------------------DAPTFQESAL-------------------------------------------------------------------TLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 276
                                    10        20        30        40|        -         -         -         -         -         -         -         -         -     | 140    |    -         -         -         -         -         -         -  |    220       230       240       250       260       270      
                                                                   41                                                                                            136      145                                                                 213                                                               

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'