No.	Name	Count	Type	Full Name
1	ANP	15	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	15	Ligand/Ion	MAGNESIUM ION
3	PO4	1	Ligand/Ion	PHOSPHATE ION

No.	Name	Count	Type	Full Name
1	ANP	5	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	PO4	-1	Ligand/Ion	PHOSPHATE ION

No.	Name	Count	Type	Full Name
1	ANP	5	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	PO4	1	Ligand/Ion	PHOSPHATE ION

No.	Name	Count	Type	Full Name
1	ANP	5	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	PO4	-1	Ligand/Ion	PHOSPHATE ION

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:173 , GLN A:174 , THR A:175 , GLY A:176 , LYS A:177 , THR A:178 , ALA A:179 , PHE A:359 , ARG A:364 , GLN A:432 , GLN A:434 , MG A:700	BINDING SITE FOR RESIDUE ANP A 600
02	AC2	SOFTWARE	THR A:178 , ANP A:600	BINDING SITE FOR RESIDUE MG A 700
03	AC3	SOFTWARE	ARG B:173 , GLN B:174 , THR B:175 , GLY B:176 , LYS B:177 , THR B:178 , ALA B:179 , PHE B:359 , ARG B:364 , GLN B:432 , GLN B:434 , MG B:700	BINDING SITE FOR RESIDUE ANP B 600
04	AC4	SOFTWARE	THR B:178 , ASP B:271 , ANP B:600	BINDING SITE FOR RESIDUE MG B 700
05	AC5	SOFTWARE	ARG C:173 , GLN C:174 , GLY C:176 , LYS C:177 , THR C:178 , ALA C:179 , PHE C:359 , ARG C:364 , GLN C:432 , GLN C:434 , MG C:700 , TYR F:368	BINDING SITE FOR RESIDUE ANP C 600
06	AC6	SOFTWARE	THR C:178 , ANP C:600	BINDING SITE FOR RESIDUE MG C 700
07	AC7	SOFTWARE	ARG C:375 , GLY D:160 , GLY D:162 , LYS D:163 , THR D:164 , VAL D:165 , GLU D:189 , ARG D:190 , TYR D:345 , PHE D:418 , ALA D:421 , MG D:700	BINDING SITE FOR RESIDUE ANP D 600
08	AC8	SOFTWARE	THR D:164 , GLU D:189 , ANP D:600	BINDING SITE FOR RESIDUE MG D 700
09	AC9	SOFTWARE	ILE B:345 , SER B:346 , VAL B:373 , ARG B:375 , GLY F:158 , ALA F:159 , GLY F:160 , VAL F:161 , GLY F:162 , LYS F:163 , THR F:164 , VAL F:165 , GLU F:189 , ARG F:190 , TYR F:345 , PHE F:418 , ALA F:421 , PHE F:424 , MG F:700	BINDING SITE FOR RESIDUE ANP F 600
10	BC1	SOFTWARE	THR F:164 , GLU F:189 , ARG F:190 , GLU F:193 , ANP F:600	BINDING SITE FOR RESIDUE MG F 700
11	BC2	SOFTWARE	ARG J:173 , GLN J:174 , THR J:175 , GLY J:176 , LYS J:177 , THR J:178 , ALA J:179 , PHE J:359 , ARG J:364 , PRO J:365 , GLN J:432 , GLN J:434 , MG J:700	BINDING SITE FOR RESIDUE ANP J 600
12	BC3	SOFTWARE	THR J:178 , ANP J:600	BINDING SITE FOR RESIDUE MG J 700
13	BC4	SOFTWARE	GLN K:174 , THR K:175 , GLY K:176 , LYS K:177 , THR K:178 , ALA K:179 , GLU K:330 , PHE K:359 , ARG K:364 , GLN K:432 , GLN K:434 , MG K:700	BINDING SITE FOR RESIDUE ANP K 600
14	BC5	SOFTWARE	THR K:178 , ASP K:271 , ANP K:600	BINDING SITE FOR RESIDUE MG K 700
15	BC6	SOFTWARE	ARG L:173 , GLN L:174 , THR L:175 , GLY L:176 , LYS L:177 , THR L:178 , ALA L:179 , GLU L:330 , PHE L:359 , GLN L:432 , GLN L:434 , MG L:700 , TYR O:368	BINDING SITE FOR RESIDUE ANP L 600
16	BC7	SOFTWARE	THR L:178 , ANP L:600	BINDING SITE FOR RESIDUE MG L 700
17	BC8	SOFTWARE	SER L:346 , SER L:374 , ARG L:375 , ALA M:159 , GLY M:160 , VAL M:161 , GLY M:162 , LYS M:163 , THR M:164 , VAL M:165 , GLU M:189 , ARG M:190 , TYR M:311 , TYR M:345 , PHE M:418 , ALA M:421 , PHE M:424 , MG M:700	BINDING SITE FOR RESIDUE ANP M 600
18	BC9	SOFTWARE	THR M:164 , GLU M:189 , ARG M:190 , GLU M:193 , ANP M:600	BINDING SITE FOR RESIDUE MG M 700
19	CC1	SOFTWARE	ARG J:375 , LYS N:163 , ARG N:190 , ASP N:256 , ASN N:257 , ARG N:260	BINDING SITE FOR RESIDUE PO4 N 800
20	CC2	SOFTWARE	SER K:346 , VAL K:373 , ARG K:375 , ALA O:159 , GLY O:160 , VAL O:161 , GLY O:162 , LYS O:163 , THR O:164 , VAL O:165 , GLU O:189 , ARG O:190 , TYR O:345 , ALA O:421 , PHE O:424 , MG O:700	BINDING SITE FOR RESIDUE ANP O 600
21	CC3	SOFTWARE	THR O:164 , GLU O:189 , ANP O:600	BINDING SITE FOR RESIDUE MG O 700
22	CC4	SOFTWARE	ARG S:173 , GLN S:174 , GLY S:176 , LYS S:177 , THR S:178 , ALA S:179 , GLU S:330 , PHE S:359 , ARG S:364 , GLN S:432 , GLN S:434 , MG S:700 , TYR V:368	BINDING SITE FOR RESIDUE ANP S 600
23	CC5	SOFTWARE	THR S:178 , ASP S:271 , ANP S:600	BINDING SITE FOR RESIDUE MG S 700
24	CC6	SOFTWARE	GLN T:174 , THR T:175 , GLY T:176 , LYS T:177 , THR T:178 , ALA T:179 , GLU T:330 , PHE T:359 , ARG T:364 , GLN T:432 , GLN T:434 , MG T:700	BINDING SITE FOR RESIDUE ANP T 600
25	CC7	SOFTWARE	THR T:178 , ANP T:600	BINDING SITE FOR RESIDUE MG T 700
26	CC8	SOFTWARE	ARG U:173 , GLN U:174 , THR U:175 , GLY U:176 , LYS U:177 , THR U:178 , ALA U:179 , PHE U:359 , ARG U:364 , GLN U:432 , GLN U:434 , MG U:700	BINDING SITE FOR RESIDUE ANP U 600
27	CC9	SOFTWARE	THR U:178 , ASP U:271 , ANP U:600	BINDING SITE FOR RESIDUE MG U 700
28	DC1	SOFTWARE	ARG U:375 , ALA V:159 , GLY V:160 , VAL V:161 , GLY V:162 , LYS V:163 , THR V:164 , VAL V:165 , GLU V:189 , ARG V:190 , TYR V:311 , TYR V:345 , PHE V:418 , ALA V:421 , PHE V:424 , MG V:700	BINDING SITE FOR RESIDUE ANP V 600
29	DC2	SOFTWARE	THR V:164 , GLU V:189 , GLU V:193 , ANP V:600	BINDING SITE FOR RESIDUE MG V 700
30	DC3	SOFTWARE	SER T:346 , VAL T:373 , ARG T:375 , ALA X:159 , GLY X:160 , VAL X:161 , GLY X:162 , LYS X:163 , THR X:164 , VAL X:165 , GLU X:189 , ARG X:190 , TYR X:345 , PHE X:418 , PHE X:424 , MG X:700	BINDING SITE FOR RESIDUE ANP X 600
31	DC4	SOFTWARE	LYS X:163 , THR X:164 , GLU X:189 , ANP X:600	BINDING SITE FOR RESIDUE MG X 700

No.	Residues
1	Asp A:271	-	Asp A:272
2	Arg A:364	-	Pro A:365
3	Asp B:271	-	Asp B:272
4	Arg B:364	-	Pro B:365
5	Asp C:271	-	Asp C:272
6	Arg C:364	-	Pro C:365
7	Asp D:256	-	Asn D:257
8	Tyr D:345	-	Pro D:346
9	Asp E:256	-	Asn E:257
10	Tyr E:345	-	Pro E:346
11	Asp F:256	-	Asn F:257
12	Tyr F:345	-	Pro F:346
13	Asp J:271	-	Asp J:272
14	Arg J:364	-	Pro J:365
15	Asp K:271	-	Asp K:272
16	Arg K:364	-	Pro K:365
17	Asp L:271	-	Asp L:272
18	Arg L:364	-	Pro L:365
19	Asp M:256	-	Asn M:257
20	Tyr M:345	-	Pro M:346
21	Asp N:256	-	Asn N:257
22	Tyr N:345	-	Pro N:346
23	Asp O:256	-	Asn O:257
24	Tyr O:345	-	Pro O:346
25	Asp S:271	-	Asp S:272
26	Arg S:364	-	Pro S:365
27	Asp T:271	-	Asp T:272
28	Arg T:364	-	Pro T:365
29	Asp U:271	-	Asp U:272
30	Arg U:364	-	Pro U:365
31	Asp V:256	-	Asn V:257
32	Tyr V:345	-	Pro V:346
33	Asp W:256	-	Asn W:257
34	Tyr W:345	-	Pro W:346
35	Asp X:256	-	Asn X:257
36	Tyr X:345	-	Pro X:346

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ATPG_YEAST_001 *	S	207	I	ATPG_YEAST	---	---	G/P/Y	S	174	I
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	G/P/Y	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ATPG_YEAST_001 *	S	207	I	ATPG_YEAST	---	---	G	S	174	I
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	G	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ATPG_YEAST_001 *	S	207	I	ATPG_YEAST	---	---	P	S	174	I
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	P	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ATPG_YEAST_001 *	S	207	I	ATPG_YEAST	---	---	Y	S	174	I
2	UniProt	VAR_ATPG_YEAST_002 *	S	308	F	ATPG_YEAST	---	---	Y	S	275	F
	* ID not provided by source
SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	3	G:263-276 P:263-276 Y:263-275
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	9	D:346-355 E:346-355 F:346-355 M:346-355 N:346-355 O:346-355 V:346-355 W:346-355 X:346-355
				ATPA_YEAST	400-409	9	A:365-374 B:365-374 C:365-374 J:365-374 K:365-374 L:365-374 S:365-374 T:365-374 U:365-374

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	1	G:263-276 - -
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	3	D:346-355 E:346-355 F:346-355 - - - - - -
				ATPA_YEAST	400-409	3	A:365-374 B:365-374 C:365-374 - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	1	- P:263-276 -
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	3	- - - M:346-355 N:346-355 O:346-355 - - -
				ATPA_YEAST	400-409	3	- - - J:365-374 K:365-374 L:365-374 - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ATPASE_GAMMA	PS00153	ATP synthase gamma subunit signature.	ATPG_YEAST	296-309	1	- - Y:263-275
2	ATPASE_ALPHA_BETA	PS00152	ATP synthase alpha and beta subunits signature.	ATPB_YEAST	379-388	3	- - - - - - V:346-355 W:346-355 X:346-355
				ATPA_YEAST	400-409	3	- - - - - - S:365-374 T:365-374 U:365-374

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	YBL099W	1	YBL099W.1	II:37050-38687	1638	ATPA_YEAST	1-545	545	9	A:26-509 (gaps) B:25-509 (gaps) C:26-509 J:26-509 (gaps) K:21-509 (gaps) L:26-509 (gaps) S:27-509 (gaps) T:26-509 (gaps) U:26-509 (gaps)	484 485 484 484 489 484 483 484 484
2.1	YBR039W	1	YBR039W.1	II:315575-316510	936	ATPG_YEAST	1-311	311	3	G:1-276 (gaps) P:1-276 (gaps) Y:1-275 (gaps)	276 276 275
3.1	YDL004W	1	YDL004W.1	IV:443027-443509	483	ATPD_YEAST	1-160	160	3	H:11-136 (gaps) Q:12-137 (gaps) Z:121-135	126 126 15
4.1	YJR121W	1	YJR121W.1	X:647597-649132	1536	ATPB_YEAST	1-511	511	9	D:6-475 E:8-475 F:7-475 M:6-475 N:6-475 O:7-474 V:6-475 W:8-474 X:7-475	470 468 469 470 470 468 470 467 469
5.1	YPL271W	1	YPL271W.1	XVI:30079-30267	189	ATP5E_YEAST	1-62	62	3	1:9-45 (gaps) I:8-61 (gaps) R:10-47 (gaps)	37 54 38

Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain 1 from PDB  Type:PROTEIN  Length:25
 aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot  Length:62

    Alignment length:37
                                    19        29        39       
          ATP5E_YEAST    10 SYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYT  46
               SCOP domains ------------------------------------- SCOP domains
               CATH domains ------------------------------------- CATH domains
               Pfam domains ------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh..------------............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------- PROSITE
               Transcript 5 Exon 5.1  PDB: 1:9-45 (gaps)          Transcript 5
                 3oe7 1   9 SYAAYLNVAAQAI------------VLNRSQTDAFYT  45
                                    18  |      -     |  38       
                                       21           34           

Chain A from PDB  Type:PROTEIN  Length:482
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee....eeeee...........eeeeeeee.eeeehhhhh..ee................eeee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhhhh..hhhhh.eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh..ee........eeeeeeeee.......hhhhhhhhhhh.eeee.hhhhhhhh..........ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.--...hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: A:26-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 1
                 3oe7 A  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405 |  |  415       425       435       445       455       465       475       485       495       505    
                                                                                                                                                                                                                                                                                                                                                                                                                       407  |                                                                                                   
                                                                                                                                                                                                                                                                                                                                                                                                                          410                                                                                                   

Chain B from PDB  Type:PROTEIN  Length:483
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:485
                                    69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539     
           ATPA_YEAST    60 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeee..eeeeee.......eeeee....eeeeeeee..eeeeee..hhhhh....eeeeeeee.eeeehhhhh..ee................eeee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhh.........eeeeeeee..hhhhhhhhhhhhhhhhhhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhhh.eeeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.....hhhhh..eeeeeeeee.......hhhhhhhhh...eeeeehhhhhhhh..........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh--....hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: B:25-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                            Transcript 1
                 3oe7 B  25 ANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404  |  | 414       424       434       444       454       464       474       484       494       504     
                                                                                                                                                                                                                                                                                                                                                                                                                        407  |                                                                                                   
                                                                                                                                                                                                                                                                                                                                                                                                                           410                                                                                                   

Chain C from PDB  Type:PROTEIN  Length:484
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee....eeeee...........eeeeeeee.eeeehhhhh..ee................eeee................ee...hhhhhhhh.ee.....eeeee...hhhhhhhhhhhhhhhhhh........eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeeeee......hhhhhhhhhhh.eeeeehhhhhh............ee.hhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: C:26-509 UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                  Transcript 1
                 3oe7 C  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505    

Chain D from PDB  Type:PROTEIN  Length:470
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:470
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508
           ATPB_YEAST    39 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains d3oe7d1 D:6-82 automated matches                                             d3oe7d2 D:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7d3 D:358-475 automated matches                                                                                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..eee................eee................ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhh.........eeeeeeee.hhhh..hhhhhhhhhhh.eeee.hhhhhh............ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh......hhhhh....hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: D:6-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                     Transcript 4
                 3oe7 D   6 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475

Chain E from PDB  Type:PROTEIN  Length:468
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:468
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500        
           ATPB_YEAST    41 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains d3oe7e1 E:8-82 automated matches                                           d3oe7e2 E:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7e3 E:358-475 automated matches                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..ee.................eee.....................hhhhhhhh......eeeee.....hhhhhhhhhhhhhhhhhh..eeeeeeeehhhhhhhhhhhhhhhh.........eeeeeee...hhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhh....eeee.hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.....hhhhhh......hhhhhhhhhhhhhh......hhhhh.....hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: E:8-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                   Transcript 4
                 3oe7 E   8 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467        

Chain F from PDB  Type:PROTEIN  Length:469
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:469
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499         
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains d3oe7f1 F:7-82 automated matches                                            d3oe7f2 F:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7f3 F:358-475 automated matches                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..eeeeee..........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..ee.................eee................ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhhh......eeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhh........eeeeeeeee.hhhh..hhhhhhhhhhh.eeee.hhhhhh............ee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh......hhhhhh...hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: F:7-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 4
                 3oe7 F   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         

Chain G from PDB  Type:PROTEIN  Length:265
 aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot  Length:311

    Alignment length:276
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303      
           ATPG_YEAST    34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
               SCOP domains d3oe7g_ G: automated matches                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....-----------.eeeeee........hhhhhhhhhhhhhhhh....eeeeehhhhhhhhhh.hhh.eeeeee.......hhhhhhhhhhhhhhh.hhhhh.eeeeeeee.......eeeeee..hhhhhhh..hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA   PROSITE
               Transcript 2 Exon 2.1  PDB: G:1-276 (gaps) UniProt: 1-311 [INCOMPLETE]                                                                                                                                                                                                                            Transcript 2
                 3oe7 G   1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKN-----------KELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDTITGASS 276
                                    10        20        30        40        50        |-         -|       80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
                                                                                     59          71                                                                                                                                                                                                             

Chain H from PDB  Type:PROTEIN  Length:120
 aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:126
                                    42        52        62        72        82        92       102       112       122       132       142       152      
           ATPD_YEAST    33 KLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSV 158
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee........--...eeeee....eeeee.....eeeee...eeeeee..eeeeee...eeeee.....eeeee...-......-hhhhhhhhhhhhhhhh.--.hhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 3 Exon 3.1  PDB: H:11-136 (gaps) UniProt: 1-160 [INCOMPLETE]                                                                     Transcript 3
                 3oe7 H  11 KLQFALPHETLYS--EVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEA-PLESFS-ENIKNLLAEAKKNVSSS--REAAEAAIQVEVLENLQSV 136
                                    20  |  |  30        40        50        60        70        80        90 |    |100       110    |  120       130      
                                       23 26                                                              90 |   97 |             115  |                  
                                                                                                            92     99                118                  

Chain I from PDB  Type:PROTEIN  Length:48
 aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot  Length:62

    Alignment length:54
                                    18        28        38        48        58    
          ATP5E_YEAST     9 ISYAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQYKNGTAASEPTPITK  62
               SCOP domains ------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..---....hhhhhh......eeee...---......ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------ PROSITE
               Transcript 5 Exon 5.1  PDB: I:8-61 (gaps) UniProt: 1-62             Transcript 5
                 3oe7 I   8 ISYAAYLNVAAQAIRS---TELQTASVLNRSQTDAFYTQYKN---ASEPTPITK  61
                                    17     |  27        37        47 |   |  57    
                                          23  27                    49  53        

Chain J from PDB  Type:PROTEIN  Length:481
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeeee..eeeeee...........eeeeeeee.eee.hhhhh.eeee................eee................ee...hhhhhhhh.ee....eeeeee...hhhhhhhhhhhhhhhh....hhhh.eeeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeeeee......hhhhhhhhhhh.eeee.hhhhhhhh..........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh---...hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: J:26-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 1
                 3oe7 J  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFA---SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405|   |  415       425       435       445       455       465       475       485       495       505    
                                                                                                                                                                                                                                                                                                                                                                                                                      406 410                                                                                                   

Chain K from PDB  Type:PROTEIN  Length:486
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:489
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535         
           ATPA_YEAST    56 VSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh..eeeeeeee..eeeeee........eee.....eeeeeeee..eeeeee..hhhhh....eee......eeeehhhhh..eee...............eeee................ee...hhhhhhhh.ee.....eeeee...hhhhhhhhhhhhhhhhhh.......eeeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhhh...........eeeeeeeeee......hhhhhhhhh...eeeeehhhhhhhh..........ee.......hhhhhhhh.hhhhhhhhhhhhhh...---..hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: K:21-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                Transcript 1
                 3oe7 K  21 VSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ---DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400      |  -|      420       430       440       450       460       470       480       490       500         
                                                                                                                                                                                                                                                                                                                                                                                                                            407 411                                                                                                  

Chain L from PDB  Type:PROTEIN  Length:482
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee...eeeeee...........eeeeeeee.eeeehhhhh..eee...............eeee.....................hhhhhhhh........eeee....hhhhhhhhhhhhhhhhhh........eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh..ee.hhhhh..eeeeeeeee.......hhhhhhhhh...eeeeehhhhhhh...........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.--...hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: L:26-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 1
                 3oe7 L  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ--SDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405 |  |  415       425       435       445       455       465       475       485       495       505    
                                                                                                                                                                                                                                                                                                                                                                                                                       407  |                                                                                                   
                                                                                                                                                                                                                                                                                                                                                                                                                          410                                                                                                   

Chain M from PDB  Type:PROTEIN  Length:470
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:470
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508
           ATPB_YEAST    39 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains d3oe7m1 M:6-82 automated matches                                             d3oe7m2 M:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7m3 M:358-475 automated matches                                                                                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeee...........eee.........eeeeee....eeeeee...........eeee.....eeeehhhhh..ee................eeee.....................hhhhhhhh......eeeeee....hhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh.........eeeeeeee.hhhh..hhhhhhhhhhh.eeee.hhhhhhh...........ee...hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh......hhhhhhhhhhhhhh......hhhhh....hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: M:6-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                     Transcript 4
                 3oe7 M   6 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475

Chain N from PDB  Type:PROTEIN  Length:470
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:470
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508
           ATPB_YEAST    39 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains d3oe7n1 N:6-82 automated matches                                             d3oe7n2 N:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7n3 N:358-475 automated matches                                                                                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..ee.................eee......hhhhh.....ee...hhhhhhhh.ee...eeeee.....hhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhh....eeee.hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh..hhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhhh.....hhhhh....hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: N:6-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                     Transcript 4
                 3oe7 N   6 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475

Chain O from PDB  Type:PROTEIN  Length:468
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:468
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499        
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 507
               SCOP domains d3oe7o1 O:7-82 automated matches                                            d3oe7o2 O:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7o3 O:358-474 automated matches                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee.hhhhh..eee................eee................ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhhh......eeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhh.........eeeeeeee.hhhh..hhhhhhhhhhh.eeee.hhhhhhh...........ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh......hhhhhhhhhhhhhhh.....hhhhh....hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP----------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 4 Exon 4.1  PDB: O:7-474 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                   Transcript 4
                 3oe7 O   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 474
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466        

Chain P from PDB  Type:PROTEIN  Length:244
 aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot  Length:311

    Alignment length:276
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303      
           ATPG_YEAST    34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS 309
               SCOP domains d3oe7p_ P: automated matches                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...------------..eeeee........hhhhhhhhhhhhhh......eeeeehhhhhh-----..--..eee........hhhhhhhhhhhhhhhhh......eeeeeee...--..eeeeee.......-----------......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA   PROSITE
               Transcript 2 Exon 2.1  PDB: P:1-276 (gaps) UniProt: 1-311 [INCOMPLETE]                                                                                                                                                                                                                            Transcript 2
                 3oe7 P   1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETK------------KELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKM-----HP--IKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVS--SFEPSEKPIFNAKTI-----------DTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDTITGASS 276
                                    10        20        30        40        50       | -         -|       80        90       100       110     |   - ||  | 130       140       150       160       170|  |   180       | -       200       210       220       230       240       250       260       270      
                                                                                    58           71                                          116   122|  |                                          171  |           188         200                                                                            
                                                                                                                                                    123  |                                             174                                                                                                      
                                                                                                                                                       126                                                                                                                                                      

Chain Q from PDB  Type:PROTEIN  Length:84
 aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:126
                                    43        53        63        73        83        93       103       113       123       133       143       153      
           ATPD_YEAST    34 LQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSVL 159
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ATP-synt         _DE_N-3oe7Q01 Q:12-90                                               -------------                ------------ Pfam domains (1)
           Pfam domains (2) ATP-synt         _DE_N-3oe7Q02 Q:12-90                                               -------------                ------------ Pfam domains (2)
         Sec.struct. author ........---------.............................-----------.....ee.........ee....------.hhhhhhhhhh..----------------..hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 3 Exon 3.1  PDB: Q:12-137 (gaps) UniProt: 1-160 [INCOMPLETE]                                                                     Transcript 3
                 3oe7 Q  12 LQFALPHE---------QVNLPAKSGRIGVLANHVPTVEQLLPGVV-----------FISGGFATVQPDSQLCVTAIEA------SQENIKNLLAEAK----------------QVEVLENLQSVL 137
                                   | -       |31        41        51     |   -       |71        81        |-     | 101       | -         -    |  131      
                                  19        29                          57          69                   90     97         109              126           

Chain R from PDB  Type:PROTEIN  Length:31
 aligned with ATP5E_YEAST | P21306 from UniProtKB/Swiss-Prot  Length:62

    Alignment length:38
                                    20        30        40        
          ATP5E_YEAST    11 YAAYLNVAAQAIRSSLKTELQTASVLNRSQTDAFYTQY  48
               SCOP domains -------------------------------------- SCOP domains
               CATH domains -------------------------------------- CATH domains
           Pfam domains (1) ATP-synt_Eps-       3oe7R01 R:10-47    Pfam domains (1)
           Pfam domains (2) ATP-synt_Eps-       3oe7R02 R:10-47    Pfam domains (2)
           Pfam domains (3) ATP-synt_Eps-       3oe7R03 R:10-47    Pfam domains (3)
         Sec.struct. author hhhhhhhhhhhhh-------.................. Sec.struct. author
                 SAPs(SNPs) -------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------- PROSITE
               Transcript 5 Exon 5.1  PDB: R:10-47 (gaps)          Transcript 5
                 3oe7 R  10 YAAYLNVAAQAIR-------QTASVLNRSQTDAFYTQY  47
                                    19  |      -|       39        
                                       22      30                 

Chain S from PDB  Type:PROTEIN  Length:480
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:483
                                    71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541   
           ATPA_YEAST    62 LNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..eeeeee.......eeeee....eeeeeeee..eeeeee...........eeeeeeee.eeeehhhhh.eeee...............eeee................ee...hhhhhhhh.ee.....eeee....hhhhhhhhhhhhhhhhhh........eeeeeee..hhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeee........hhhhhhhhhhh.eeeeehhhhhhh......hhhhhee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.---..hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: S:27-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                          Transcript 1
                 3oe7 S  27 LNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ---DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406|   |  416       426       436       446       456       466       476       486       496       506   
                                                                                                                                                                                                                                                                                                                                                                                                                      407 411                                                                                                  

Chain T from PDB  Type:PROTEIN  Length:481
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee..eeeeee.......eeeee....eeeeeee...eeeeee..hhhhh.....eeeeeee.eeeehhhhh..eee...............eeee................ee...hhhhhhhh.ee.....eee.....hhhhhhhhhhhhhhhh.........eeeeeeee..hhhhhhhhhhhhh.......eeeeee....hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeee........hhhhhhhhh...eeee.hhhhhhhh..........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..---...hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: T:26-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 1
                 3oe7 T  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ---DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405 |   | 415       425       435       445       455       465       475       485       495       505    
                                                                                                                                                                                                                                                                                                                                                                                                                       407 411                                                                                                  

Chain U from PDB  Type:PROTEIN  Length:481
 aligned with ATPA_YEAST | P07251 from UniProtKB/Swiss-Prot  Length:545

    Alignment length:484
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    
           ATPA_YEAST    61 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 544
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ATP-synt_ab_N-3oe7U01 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U10 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U19    U:386-490                                                                       ------------------- Pfam domains (1)
           Pfam domains (2) ATP-synt_ab_N-3oe7U02 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U11 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U20    U:386-490                                                                       ------------------- Pfam domains (2)
           Pfam domains (3) ATP-synt_ab_N-3oe7U03 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U12 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U21    U:386-490                                                                       ------------------- Pfam domains (3)
           Pfam domains (4) ATP-synt_ab_N-3oe7U04 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U13 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U22    U:386-490                                                                       ------------------- Pfam domains (4)
           Pfam domains (5) ATP-synt_ab_N-3oe7U05 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U14 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U23    U:386-490                                                                       ------------------- Pfam domains (5)
           Pfam domains (6) ATP-synt_ab_N-3oe7U06 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U15 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U24    U:386-490                                                                       ------------------- Pfam domains (6)
           Pfam domains (7) ATP-synt_ab_N-3oe7U07 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U16 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U25    U:386-490                                                                       ------------------- Pfam domains (7)
           Pfam domains (8) ATP-synt_ab_N-3oe7U08 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U17 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U26    U:386-490                                                                       ------------------- Pfam domains (8)
           Pfam domains (9) ATP-synt_ab_N-3oe7U09 U:26-94                                        -------------------------------------------------------ATP-synt_ab-3oe7U18 U:150-374                                                                                                                                                                                                    -----------ATP-synt_ab_C-3oe7U27    U:386-490                                                                       ------------------- Pfam domains (9)
         Sec.struct. author ....eeeeeeee..eeeeee.......eeeee....eeeeeee...eeeeee...........eee......eeeehhhhh..ee................eeee.....................hhhhhhhh........eeee....hhhhhhhhhhhhhhhhhh........eeeeeee..hhhhhhhhhhhhhh..hhh.eeeeee....hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh.....hhhhh..eeeeeeeee.......hhhhhhhhhhh.eeeeehhhhhhhh..........ee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhh...---....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP--------------------------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: U:26-509 (gaps) UniProt: 1-545 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                           Transcript 1
                 3oe7 U  26 NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQ---DLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT 509
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405 |   | 415       425       435       445       455       465       475       485       495       505    
                                                                                                                                                                                                                                                                                                                                                                                                                       407 411                                                                                                  

Chain V from PDB  Type:PROTEIN  Length:470
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:470
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508
           ATPB_YEAST    39 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains d3oe7v1 V:6-82 automated matches                                             d3oe7v2 V:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7v3 V:358-475 automated matches                                                                                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee..eeeee...........eeeee....eeeeeeeeeee..eeeeee...........eeee.....eee........ee.................eee......hhhhh....eee...hhhhhhh..eee..eeeeee....hhhhhhhhhhhhhh......eeeeee..hhhhhhhhhhhhhhhh.........eeeeee....hhhhhhhhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.........eeeeeeee.hhhh..hhhhhhhhh...eeee.hhhhhhhh..........ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhhh.....hhhhh....hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: V:6-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                     Transcript 4
                 3oe7 V   6 STPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475

Chain W from PDB  Type:PROTEIN  Length:467
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:467
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       
           ATPB_YEAST    41 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 507
               SCOP domains d3oe7w1 W:8-82 automated matches                                           d3oe7w2 W:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7w3 W:358-474 automated matches                                                                                   SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee..eeeee..........eeeeee....eeeeeeeee....eeeeee.............eeeeee.eee.hhhhh..eee................eee......hhhhh.....ee...hhhhhhhh.ee...eeeee.....hhhhhhhhhhhhhhhhhh..eeeeeeeehhhhhhhhhhhhhhh..........eeeeeee...hhhhhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh....hhhhh..hhhhhhhhhhh........eeeeeee..hhhhh..hhhhhhhhh...eeee.hhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhh......hhhhh....hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP----------------------------------------------------------------------------------------------------------------------- PROSITE
               Transcript 4 Exon 4.1  PDB: W:8-474 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                  Transcript 4
                 3oe7 W   8 PITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 474
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       

Chain X from PDB  Type:PROTEIN  Length:469
 aligned with ATPB_YEAST | P00830 from UniProtKB/Swiss-Prot  Length:511

    Alignment length:469
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499         
           ATPB_YEAST    40 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 508
               SCOP domains d3oe7x1 X:7-82 automated matches                                            d3oe7x2 X:83-357 automated matches                                                                                                                                                                                                                                                 d3oe7x3 X:358-475 automated matches                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ------ATP-synt_ab_N-3oe7X01 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X10 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X19 X:368-475                                                                              Pfam domains (1)
           Pfam domains (2) ------ATP-synt_ab_N-3oe7X02 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X11 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X20 X:368-475                                                                              Pfam domains (2)
           Pfam domains (3) ------ATP-synt_ab_N-3oe7X03 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X12 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X21 X:368-475                                                                              Pfam domains (3)
           Pfam domains (4) ------ATP-synt_ab_N-3oe7X04 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X13 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X22 X:368-475                                                                              Pfam domains (4)
           Pfam domains (5) ------ATP-synt_ab_N-3oe7X05 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X14 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X23 X:368-475                                                                              Pfam domains (5)
           Pfam domains (6) ------ATP-synt_ab_N-3oe7X06 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X15 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X24 X:368-475                                                                              Pfam domains (6)
           Pfam domains (7) ------ATP-synt_ab_N-3oe7X07 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X16 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X25 X:368-475                                                                              Pfam domains (7)
           Pfam domains (8) ------ATP-synt_ab_N-3oe7X08 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X17 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X26 X:368-475                                                                              Pfam domains (8)
           Pfam domains (9) ------ATP-synt_ab_N-3oe7X09 X:13-80                                       -------------------------------------------------------ATP-synt_ab-3oe7X18 X:136-355                                                                                                                                                                                               ------------ATP-synt_ab_C-3oe7X27 X:368-475                                                                              Pfam domains (9)
         Sec.struct. author ...eeeeeeee..eeeee...........eeee......eeeeeeeeee..eeeeee...........eeee.....eeee.......ee................eeee......hhhhh.....ee...hhhhhhhh.ee...eeeeee....hhhhhhhhhhhhhh......eeeeee..hhhhhhhhhhhhhhh..........eeeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhh........eeeeeeeee.hhhh..hhhhhhhhhhh.eeeeehhhhhh............ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhh......hhhhhhhhhhhhhhh......hhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_ALP------------------------------------------------------------------------------------------------------------------------ PROSITE
               Transcript 4 Exon 4.1  PDB: X:7-475 UniProt: 1-511 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                    Transcript 4
                 3oe7 X   7 TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAA 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         

Chain Y from PDB  Type:PROTEIN  Length:198
 aligned with ATPG_YEAST | P38077 from UniProtKB/Swiss-Prot  Length:311

    Alignment length:275
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303     
           ATPG_YEAST    34 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGAS 308
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ATP-synt-3oe7Y01 Y:1-275                                                                                                                                                                                                                                                            Pfam domains (1)
           Pfam domains (2) ATP-synt-3oe7Y02 Y:1-275                                                                                                                                                                                                                                                            Pfam domains (2)
           Pfam domains (3) ATP-synt-3oe7Y03 Y:1-275                                                                                                                                                                                                                                                            Pfam domains (3)
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.-------------------------------.........hhhhhhhhhhhh......----....hhhhhhh......-----.........hhhhhhhhhhhhhhhh..-----....eeeeee..eeeee--------------------------------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------F SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPASE_GAMMA  PROSITE
               Transcript 2 Exon 2.1  PDB: Y:1-275 (gaps) UniProt: 1-311 [INCOMPLETE]                                                                                                                                                                                                                           Transcript 2
                 3oe7 Y   1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMD-------------------------------ITSDKGLCGSIHSQLAKAVRRHLNDQP----VTIGDKIKMQLLRTHPN-----INGIGKDAPTFQESALIADKLLSVMKA-----ISIFYNDPVSSLSFEPS--------------------------------EYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDTITGAS 275
                                    10        20        30        40    |    -         -         -      | 80        90       100  |    110       120   |   130       140       150     |   - |     170       | -         -         -         -|      220       230       240       250       260       270     
                                                                       45                              77                       103  108             124   130                       156   162             178                              211                                                                

Chain Z from PDB  Type:PROTEIN  Length:15
 aligned with ATPD_YEAST | Q12165 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:15
                                   152     
           ATPD_YEAST   143 AEAAIQVEVLENLQS 157
               SCOP domains --------------- SCOP domains
               CATH domains --------------- CATH domains
               Pfam domains --------------- Pfam domains
         Sec.struct. author ...hhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------- SAPs(SNPs)
                    PROSITE --------------- PROSITE
               Transcript 3 Exon 3.1        Transcript 3
                 3oe7 Z 121 AEAAIQVEVLENLQS 135
                                   130     

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'