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(-) Description

Title :  CRYSTAL STRUCTURE OF RUBISCO FROM CHLAMYDOMONAS REINHARDTII WITH A LARGE-SUBUNIT V331A MUTATION
 
Authors :  S. Karkehabadi, S. Satagopan, T. C. Taylor, R. J. Spreitzer, I. Anderss
Date :  13 Jul 07  (Deposition) - 31 Jul 07  (Release) - 04 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Keywords :  Large Subunit Loop 6 Mutation, Co2/O2 Specificity, Carbon Dioxide Fixation, Photosynthesis, Transit Peptide, Photorespiration, Metal-Binding, Hydroxylation, Oxidoreductase, Methylation, Chloroplast, Calvin Cycle, Monooxygenase, Lyase, Rubisco, Magnesium (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Karkehabadi, S. Satagopan, T. C. Taylor, R. J. Spreitzer, I. Andersson
Structural Analysis Of Altered Large-Subunit Loop- 6-Carboxy-Terminus Interactions That Influence Catalytic Efficiency And Co2 O2 Specificity Of Ribulose-1, 5-Bisphosphate Carboxylase Oxygenase
Biochemistry V. 46 11080 2007
PubMed-ID: 17824672  |  Reference-DOI: 10.1021/BI701063F

(-) Compounds

Molecule 1 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN
    Chains: A, B, C, D, E, F, G, H
    EC Number: 4.1.1.39
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PLS-V331A
    Expression System Taxid: 562
    Mutation: YES
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Strain: 2137
    Synonym: RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE LARGE CHAIN, RUBISCO LARGE SUBUNIT
 
Molecule 2 - RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1
    Chains: I, J, K, L, M, N, O, P
    EC Number: 4.1.1.39
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PLS-V331A
    Expression System Taxid: 562
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Strain: 2137
    Synonym: RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE SMALL CHAIN, RUBISCO SMALL SUBUNIT 1

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 110)

Asymmetric/Biological Unit (7, 110)
No.NameCountTypeFull Name
1CAP8Ligand/Ion2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
2EDO46Ligand/Ion1,2-ETHANEDIOL
3HYP16Mod. Amino Acid4-HYDROXYPROLINE
4KCX8Mod. Amino AcidLYSINE NZ-CARBOXYLIC ACID
5MG8Ligand/IonMAGNESIUM ION
6MME8Mod. Amino AcidN-METHYL METHIONINE
7SMC16Mod. Amino AcidS-METHYLCYSTEINE

(-) Sites  (62, 62)

Asymmetric Unit (62, 62)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:173 , LYS A:175 , LYS A:177 , KCX A:201 , ASP A:203 , GLU A:204 , HIS A:294 , ARG A:295 , HIS A:327 , LYS A:334 , LEU A:335 , SER A:379 , GLY A:380 , GLY A:381 , GLY A:403 , GLY A:404 , MG A:477 , HOH A:2125 , HOH A:2244 , HOH A:2289 , HOH A:2290 , HOH A:2291 , HOH A:2292 , GLU B:60 , THR B:65 , TRP B:66 , ASN B:123 , HOH B:2034BINDING SITE FOR RESIDUE CAP A 476
02AC2SOFTWARELYS A:177 , KCX A:201 , ASP A:203 , GLU A:204 , CAP A:476BINDING SITE FOR RESIDUE MG A 477
03AC3SOFTWAREKCX B:201 , ASP B:203 , GLU B:204 , CAP B:477BINDING SITE FOR RESIDUE MG B 476
04AC4SOFTWAREGLU A:60 , THR A:65 , TRP A:66 , ASN A:123 , HOH A:2091 , HOH A:2092 , THR B:173 , LYS B:175 , LYS B:177 , KCX B:201 , ASP B:203 , GLU B:204 , HIS B:294 , ARG B:295 , HIS B:327 , LYS B:334 , LEU B:335 , SER B:379 , GLY B:380 , GLY B:381 , GLY B:403 , GLY B:404 , MG B:476 , HOH B:2115 , HOH B:2116 , HOH B:2233 , HOH B:2279 , HOH B:2280 , HOH B:2281 , HOH B:2282BINDING SITE FOR RESIDUE CAP B 477
05AC5SOFTWAREKCX C:201 , ASP C:203 , GLU C:204 , CAP C:477BINDING SITE FOR RESIDUE MG C 476
06AC6SOFTWARETHR C:173 , LYS C:175 , LYS C:177 , KCX C:201 , ASP C:203 , GLU C:204 , HIS C:294 , ARG C:295 , HIS C:327 , LYS C:334 , LEU C:335 , SER C:379 , GLY C:380 , GLY C:381 , GLY C:403 , GLY C:404 , MG C:476 , HOH C:2120 , HOH C:2121 , HOH C:2226 , HOH C:2239 , HOH C:2273 , HOH C:2274 , HOH C:2275 , GLU D:60 , THR D:65 , TRP D:66 , ASN D:123 , HOH D:2034 , HOH D:2085BINDING SITE FOR RESIDUE CAP C 477
07AC7SOFTWARELYS D:177 , KCX D:201 , ASP D:203 , GLU D:204 , CAP D:477BINDING SITE FOR RESIDUE MG D 476
08AC8SOFTWAREGLU C:60 , THR C:65 , TRP C:66 , ASN C:123 , HOH C:2038 , HOH C:2088 , THR D:173 , LYS D:175 , LYS D:177 , KCX D:201 , ASP D:203 , GLU D:204 , HIS D:294 , ARG D:295 , HIS D:327 , LYS D:334 , LEU D:335 , SER D:379 , GLY D:380 , GLY D:381 , GLY D:403 , GLY D:404 , MG D:476 , HOH D:2119 , HOH D:2120 , HOH D:2256 , HOH D:2257 , HOH D:2258 , HOH D:2259 , HOH D:2260BINDING SITE FOR RESIDUE CAP D 477
09AC9SOFTWARELYS E:177 , KCX E:201 , ASP E:203 , GLU E:204 , CAP E:477BINDING SITE FOR RESIDUE MG E 476
10BC1SOFTWARETHR E:173 , LYS E:175 , LYS E:177 , KCX E:201 , ASP E:203 , GLU E:204 , HIS E:294 , ARG E:295 , HIS E:327 , LYS E:334 , LEU E:335 , SER E:379 , GLY E:380 , GLY E:381 , GLY E:403 , GLY E:404 , MG E:476 , HOH E:2096 , HOH E:2205 , HOH E:2220 , HOH E:2259 , HOH E:2260 , HOH E:2261 , GLU F:60 , THR F:65 , TRP F:66 , ASN F:123 , HOH F:2078BINDING SITE FOR RESIDUE CAP E 477
11BC2SOFTWARELYS F:177 , KCX F:201 , ASP F:203 , GLU F:204 , CAP F:477BINDING SITE FOR RESIDUE MG F 476
12BC3SOFTWAREGLU E:60 , THR E:65 , TRP E:66 , ASN E:123 , HOH E:2023 , HOH E:2061 , THR F:173 , LYS F:175 , LYS F:177 , KCX F:201 , ASP F:203 , GLU F:204 , HIS F:294 , ARG F:295 , HIS F:327 , LYS F:334 , LEU F:335 , SER F:379 , GLY F:380 , GLY F:381 , GLY F:403 , GLY F:404 , MG F:476 , HOH F:2245 , HOH F:2246 , HOH F:2247 , HOH F:2248 , HOH F:2249 , HOH F:2250BINDING SITE FOR RESIDUE CAP F 477
13BC4SOFTWARELYS G:177 , KCX G:201 , ASP G:203 , GLU G:204 , CAP G:477BINDING SITE FOR RESIDUE MG G 476
14BC5SOFTWARETHR G:173 , LYS G:175 , LYS G:177 , KCX G:201 , ASP G:203 , GLU G:204 , HIS G:294 , ARG G:295 , HIS G:327 , LYS G:334 , LEU G:335 , SER G:379 , GLY G:380 , GLY G:381 , GLY G:403 , GLY G:404 , MG G:476 , HOH G:2121 , HOH G:2227 , HOH G:2279 , HOH G:2280 , HOH G:2281 , HOH G:2282 , GLU H:60 , THR H:65 , TRP H:66 , ASN H:123 , HOH H:2038 , HOH H:2088BINDING SITE FOR RESIDUE CAP G 477
15BC6SOFTWARELYS H:177 , KCX H:201 , ASP H:203 , GLU H:204 , CAP H:477BINDING SITE FOR RESIDUE MG H 476
16BC7SOFTWAREGLU G:60 , THR G:65 , TRP G:66 , ASN G:123 , HOH G:2038 , HOH G:2082 , THR H:173 , LYS H:175 , LYS H:177 , KCX H:201 , ASP H:203 , GLU H:204 , HIS H:294 , ARG H:295 , HIS H:327 , LYS H:334 , LEU H:335 , SER H:379 , GLY H:380 , GLY H:381 , GLY H:403 , GLY H:404 , MG H:476 , HOH H:2119 , HOH H:2120 , HOH H:2234 , HOH H:2245 , HOH H:2277 , HOH H:2278 , HOH H:2279BINDING SITE FOR RESIDUE CAP H 477
17BC8SOFTWAREVAL A:17 , LYS A:18 , THR A:65 , TRP A:66 , THR A:67 , THR A:68 , HOH A:2014 , HOH A:2293BINDING SITE FOR RESIDUE EDO A1477
18BC9SOFTWAREGLU A:52 , HOH A:2294BINDING SITE FOR RESIDUE EDO A1478
19CC1SOFTWAREARG A:295 , SER A:328 , GLY A:329 , GLU A:336 , PHE A:345 , HOH A:2193 , HOH A:2295BINDING SITE FOR RESIDUE EDO A1479
20CC2SOFTWARELYS H:466 , GLU H:468 , PHE H:469 , HOH H:2281BINDING SITE FOR RESIDUE EDO H1477
21CC3SOFTWAREARG H:295 , HIS H:298 , ASP H:302 , PHE H:311 , SER H:328 , GLU H:336 , PHE H:345 , HOH H:2199BINDING SITE FOR RESIDUE EDO H1478
22CC4SOFTWARETYR A:226 , LYS O:49 , GLU O:55 , HOH O:2079BINDING SITE FOR RESIDUE EDO O1141
23CC5SOFTWAREGLY O:37 , TRP O:38 , PHE O:81 , GLY O:82 , CYS O:83 , HOH O:2081BINDING SITE FOR RESIDUE EDO O1142
24CC6SOFTWAREVAL C:17 , LYS C:18 , THR C:65 , TRP C:66 , THR C:67 , THR C:68 , HOH C:2021 , HOH C:2040BINDING SITE FOR RESIDUE EDO C1475
25CC7SOFTWAREGLY K:37 , TRP K:38 , ILE K:39 , GLY K:82 , CYS K:83BINDING SITE FOR RESIDUE EDO K1141
26CC8SOFTWARETYR B:24 , GLY B:64 , THR B:68 , VAL B:69 , ASP B:72 , EDO B:1476 , HOH B:2283 , HOH B:2284 , HOH B:2285BINDING SITE FOR RESIDUE EDO B1475
27CC9SOFTWAREVAL B:17 , LYS B:18 , THR B:65 , TRP B:66 , THR B:67 , THR B:68 , EDO B:1475 , HOH B:2283 , HOH B:2286BINDING SITE FOR RESIDUE EDO B1476
28DC1SOFTWAREPHE A:469 , HOH A:2296 , TYR B:20BINDING SITE FOR RESIDUE EDO B1477
29DC2SOFTWAREHOH A:2294 , LYS B:466 , PHE B:467 , GLU B:468 , PHE B:469BINDING SITE FOR RESIDUE EDO B1478
30DC3SOFTWARETYR H:226 , ALA H:230 , LYS J:49 , GLU J:55 , ASP J:69 , HOH J:2083BINDING SITE FOR RESIDUE EDO J1141
31DC4SOFTWARELEU G:270 , GLY G:273 , PHE G:274 , HOH G:2287 , LEU H:270 , THR H:271BINDING SITE FOR RESIDUE EDO G1479
32DC5SOFTWARELYS D:18 , THR D:65 , TRP D:66 , THR D:67 , THR D:68 , EDO D:1477 , HOH D:2037 , HOH D:2261BINDING SITE FOR RESIDUE EDO D1475
33DC6SOFTWARELYS D:466 , PHE D:467 , GLU D:468 , PHE D:469 , HOH D:2262BINDING SITE FOR RESIDUE EDO D1476
34DC7SOFTWARETYR E:24 , THR E:68 , VAL E:69 , ASP E:72 , HOH E:2026 , HOH E:2262BINDING SITE FOR RESIDUE EDO E1475
35DC8SOFTWARELYS E:466 , PHE E:467 , GLU E:468 , PHE E:469BINDING SITE FOR RESIDUE EDO E1477
36DC9SOFTWAREGLY J:37 , TRP J:38 , PHE J:81 , GLY J:82 , CYS J:83 , HOH J:2084BINDING SITE FOR RESIDUE EDO J1142
37EC1SOFTWARETYR D:24 , THR D:68 , VAL D:69 , ASP D:72 , EDO D:1475 , HOH D:2036 , HOH D:2037 , HOH D:2045BINDING SITE FOR RESIDUE EDO D1477
38EC2SOFTWAREARG D:295 , PHE D:311 , GLY D:329 , GLU D:336 , HOH D:2191BINDING SITE FOR RESIDUE EDO D1478
39EC3SOFTWARETYR F:226 , LYS P:49 , GLU P:55 , HOH P:2045 , HOH P:2077BINDING SITE FOR RESIDUE EDO P1141
40EC4SOFTWARETYR D:226 , HOH D:2146 , LYS N:49 , GLU N:55 , ASP N:69 , HOH N:2033BINDING SITE FOR RESIDUE EDO N1141
41EC5SOFTWAREGLY N:37 , ILE N:39 , PHE N:81 , GLY N:82 , CYS N:83 , HOH N:2072BINDING SITE FOR RESIDUE EDO N1142
42EC6SOFTWARETYR B:226 , LYS B:227 , HOH B:2142 , LYS L:49 , GLU L:55 , SER L:56 , ASP L:69BINDING SITE FOR RESIDUE EDO L1141
43EC7SOFTWAREGLY A:10 , HOH A:2051 , GLY L:37 , ILE L:39 , GLY L:82BINDING SITE FOR RESIDUE EDO L1142
44EC8SOFTWARELYS A:466 , GLU A:468 , PHE A:469 , HOH A:2296BINDING SITE FOR RESIDUE EDO A1480
45EC9SOFTWARETYR C:20 , GLU C:52 , HOH C:2277 , HOH C:2278BINDING SITE FOR RESIDUE EDO C1477
46FC1SOFTWARELYS C:466 , PHE C:467 , GLU C:468 , PHE C:469 , HOH C:2279 , HOH C:2280BINDING SITE FOR RESIDUE EDO C1478
47FC2SOFTWAREARG C:295 , PHE C:345 , ASP C:473 , HOH C:2281 , HOH C:2282BINDING SITE FOR RESIDUE EDO C1479
48FC3SOFTWARETYR G:20 , GLU G:52 , HOH H:2281BINDING SITE FOR RESIDUE EDO G1480
49FC4SOFTWARETYR C:226 , LYS I:49 , GLU I:55 , HOH I:2039 , HOH I:2075BINDING SITE FOR RESIDUE EDO I1141
50FC5SOFTWARETYR E:226 , HOH E:2126 , LYS K:49 , GLU K:55 , HOH K:2051BINDING SITE FOR RESIDUE EDO K1142
51FC6SOFTWARETYR G:226 , LYS M:49 , GLU M:55 , HOH M:2056 , HOH M:2103BINDING SITE FOR RESIDUE EDO M1141
52FC7SOFTWAREGLY H:10 , GLY M:37 , ILE M:39 , PHE M:81 , GLY M:82 , HOH M:2104 , HOH M:2105 , HOH M:2106BINDING SITE FOR RESIDUE EDO M1142
53FC8SOFTWARELEU C:270 , HOH C:2276 , LEU D:270 , HOH D:2167BINDING SITE FOR RESIDUE EDO C1476
54FC9SOFTWARELYS H:18 , THR H:65 , TRP H:66 , THR H:67 , THR H:68 , HOH H:2019 , HOH H:2280BINDING SITE FOR RESIDUE EDO H1475
55GC1SOFTWAREGLU H:52BINDING SITE FOR RESIDUE EDO H1476
56GC2SOFTWARETYR G:24 , GLY G:64 , THR G:68 , VAL G:69 , ASP G:72 , EDO G:1476 , HOH G:2283 , HOH G:2284 , HOH G:2285BINDING SITE FOR RESIDUE EDO G1475
57GC3SOFTWARELYS G:18 , THR G:65 , TRP G:66 , THR G:67 , THR G:68 , EDO G:1475 , HOH G:2013 , HOH G:2284BINDING SITE FOR RESIDUE EDO G1476
58GC4SOFTWARELYS G:466 , PHE G:467 , GLU G:468 , PHE G:469 , HOH G:2286BINDING SITE FOR RESIDUE EDO G1477
59GC5SOFTWAREARG G:295 , PHE G:345 , ASP G:473BINDING SITE FOR RESIDUE EDO G1478
60GC6SOFTWARELYS E:18 , THR E:65 , TRP E:66 , THR E:67 , THR E:68 , HOH E:2006 , HOH E:2026BINDING SITE FOR RESIDUE EDO E1476
61GC7SOFTWARELYS F:18 , THR F:65 , TRP F:66 , THR F:67 , THR F:68 , HOH F:2251 , HOH F:2252BINDING SITE FOR RESIDUE EDO F1475
62GC8SOFTWAREGLU F:52 , HOH F:2253BINDING SITE FOR RESIDUE EDO F1476

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:247 -B:247
2C:247 -D:247
3E:247 -F:247
4G:247 -H:247

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Lys A:175 -Pro A:176
2Lys B:175 -Pro B:176
3Lys C:175 -Pro C:176
4Lys D:175 -Pro D:176
5Lys E:175 -Pro E:176
6Lys F:175 -Pro F:176
7Lys G:175 -Pro G:176
8Lys H:175 -Pro H:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 8)

Asymmetric/Biological Unit (1, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RBL_CHLRE_001 *L46PRBL_CHLRE  ---  ---A/B/C/D/E/F/G/HP46P
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 8)

Asymmetric/Biological Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RUBISCO_LARGEPS00157 Ribulose bisphosphate carboxylase large chain active site.RBL_CHLRE196-204
 
 
 
 
 
 
 		  8A:196-204
B:196-204
C:196-204
D:196-204
E:196-204
F:196-204
G:196-204
H:196-204

(-) Exons   (0, 0)

(no "Exon" information available for 2V63)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63a2 A:9-149 automated matches                                                                                                            d2v63a1 A:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------2v63A01 A:22-148  [code=3.30.70.150, no name defined]                                                                          2v63A02 A:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 A   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468      
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63b2 B:9-149 automated matches                                                                                                            d2v63b1 B:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------2v63B01 B:22-148  [code=3.30.70.150, no name defined]                                                                          2v63B02 B:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 B   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468      
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain C from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63c2 C:9-149 automated matches                                                                                                            d2v63c1 C:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------2v63C01 C:22-148  [code=3.30.70.150, no name defined]                                                                          2v63C02 C:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 C   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468      
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain D from PDB  Type:PROTEIN  Length:464
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:464
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470    
            RBL_CHLRE    11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63d2 D:11-149 automated matches                                                                                                         d2v63d1 D:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -----------2v63D01 D:22-148  [code=3.30.70.150, no name defined]                                                                          2v63D02 D:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -----------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 D  11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    20        30        40        50        60        70        80        90       100   |   110       120       130       140       150|      160       170       180       190       200|      210       220       230       240       250     | 260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470    
                                                                                                                       104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain E from PDB  Type:PROTEIN  Length:464
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:464
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470    
            RBL_CHLRE    11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63e2 E:11-149 automated matches                                                                                                         d2v63e1 E:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -----------2v63E01 E:22-148  [code=3.30.70.150, no name defined]                                                                          2v63E02 E:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -----------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 E  11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    20        30        40        50        60        70        80        90       100   |   110       120       130       140       150|      160       170       180       190       200|      210       220       230       240       250     | 260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470    
                                                                                                                       104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain F from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63f2 F:9-149 automated matches                                                                                                            d2v63f1 F:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------2v63F01 F:22-148  [code=3.30.70.150, no name defined]                                                                          2v63F02 F:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 F   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468      
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain G from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63g2 G:9-149 automated matches                                                                                                            d2v63g1 G:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------2v63G01 G:22-148  [code=3.30.70.150, no name defined]                                                                          2v63G02 G:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 G   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468      
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain H from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468      
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
               SCOP domains d2v63h2 H:9-149 automated matches                                                                                                            d2v63h1 H:150-474 automated matches                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------2v63H01 H:22-148  [code=3.30.70.150, no name defined]                                                                          2v63H02 H:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------ CATH domains
           Pfam domains (1) ------------RuBisCO_large_N-2v63H09 H:21-146                                                                                              -------RuBisCO_large-2v63H01 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (1)
           Pfam domains (2) ------------RuBisCO_large_N-2v63H10 H:21-146                                                                                              -------RuBisCO_large-2v63H02 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (2)
           Pfam domains (3) ------------RuBisCO_large_N-2v63H11 H:21-146                                                                                              -------RuBisCO_large-2v63H03 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (3)
           Pfam domains (4) ------------RuBisCO_large_N-2v63H12 H:21-146                                                                                              -------RuBisCO_large-2v63H04 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (4)
           Pfam domains (5) ------------RuBisCO_large_N-2v63H13 H:21-146                                                                                              -------RuBisCO_large-2v63H05 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (5)
           Pfam domains (6) ------------RuBisCO_large_N-2v63H14 H:21-146                                                                                              -------RuBisCO_large-2v63H06 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (6)
           Pfam domains (7) ------------RuBisCO_large_N-2v63H15 H:21-146                                                                                              -------RuBisCO_large-2v63H07 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (7)
           Pfam domains (8) ------------RuBisCO_large_N-2v63H16 H:21-146                                                                                              -------RuBisCO_large-2v63H08 H:154-462                                                                                                                                                                                                                                                                                      ------------ Pfam domains (8)
         Sec.struct. author ...........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------P-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 H   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDK 474
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468      
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                     


Chain I from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63i_ I: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63I00 I:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 I   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain J from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63j_ J: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63J00 J:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 J   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain K from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63k_ K: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63K00 K:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 K   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain L from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63l_ L: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63L00 L:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 L   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain M from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63m_ M: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63M00 M:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 M   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain N from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63n_ N: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63N00 N:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 N   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain O from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63o_ O: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63O00 O:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 O   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain P from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v63p_ P: automated matches                                                                                                                 SCOP domains
               CATH domains -2v63P00 P:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
           Pfam domains (1) ----------RuBisCO_small-2v63P01 P:11-127                                                                                       ------------- Pfam domains (1)
           Pfam domains (2) ----------RuBisCO_small-2v63P02 P:11-127                                                                                       ------------- Pfam domains (2)
           Pfam domains (3) ----------RuBisCO_small-2v63P03 P:11-127                                                                                       ------------- Pfam domains (3)
           Pfam domains (4) ----------RuBisCO_small-2v63P04 P:11-127                                                                                       ------------- Pfam domains (4)
           Pfam domains (5) ----------RuBisCO_small-2v63P05 P:11-127                                                                                       ------------- Pfam domains (5)
           Pfam domains (6) ----------RuBisCO_small-2v63P06 P:11-127                                                                                       ------------- Pfam domains (6)
           Pfam domains (7) ----------RuBisCO_small-2v63P07 P:11-127                                                                                       ------------- Pfam domains (7)
           Pfam domains (8) ----------RuBisCO_small-2v63P08 P:11-127                                                                                       ------------- Pfam domains (8)
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v63 P   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: RuBisCO_large] (36)
(-)
Clan: no clan defined [family: RuBisCO_large_N] (27)
(-)
Clan: no clan defined [family: RuBisCO_small] (23)

(-) Gene Ontology  (13, 23)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (RBL_CHLRE | P00877)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0019253    reductive pentose-phosphate cycle    The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

Chain I,J,K,L,M,N,O,P   (RBS1_CHLRE | P00873)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

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  2v63
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  RBS1_CHLRE | P00873
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  4.1.1.39
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RBL_CHLRE | P00877: 1gk8 1ir2 1uw9 1uwa 1uzd 1uzh 2v67 2v68 2v69 2v6a 2vdh 2vdi 5bs2
        RBS1_CHLRE | P00873: 1gk8 1uw9 1uwa 1uzd 1uzh 2v67 2v68 2v69 2v6a 2vdh 2vdi

(-) Related Entries Specified in the PDB File

1gk8 RUBISCO FROM CHLAMYDOMONAS REINHARDTII
1ir2 CRYSTAL STRUCTURE OF ACTIVATED RIBULOSE-1,5 -BISPHOSPHATECARBOXYLASE/OXYGENASE (RUBISCO) FROM GREEN ALGA,CHLAMYDOMONAS REINHARDTII COMPLEXED WITH 2-CARBOXYARABINITOL-1,5-BISPHOSPHATE ( 2-CABP)
1uw9 L290F-A222T CHLAMYDOMONAS RUBISCO MUTANT
1uzd CHLAMYDOMONAS,SPINACH CHIMERIC RUBISCO
1uzh A CHIMERIC CHLAMYDOMONAS, SPINACH RUBISCO ENZYME
2v67 CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH A LARGE-SUBUNIT SUPRESSOR MUTATION T342I
2v68 CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH LARGE-SUBUNIT MUTATIONS V331A, T342I
2v69 CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH A LARGE-SUBUNIT MUTATION D473E
2v6a CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH LARGE-SUBUNIT MUTATIONS V331A, G344S